Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012358_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:172986860:172987579:-1 gene:Zm00001d012358 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Tyrosine specific protein phosphatase-like
Sequence

ATGACATCGGAGGAGCACCCCTCGTATGCGTCCTCAAATGGCATCACCACCATCGGCTCC
GATGAACATCTTGATCCCTCGCCATCACCTTCGACGTCCTTCGACTCTCCTTCTGAATCT
GATGACTCCGCCGCCTCCTTGCTGCTCTCGGACGACTCTTCAGAGTCCGAGCCCATCATT
TTCAAGAAACCCCACCCACCCGTGCGCTCGTGGCTGGCCTCCGATGAGATCGTGATCCTC
AAGACCGTCGTGTCGCACCGGCAGAAGCACGGGCGACTTCCCCTGGCAGACAACCTCGCC
ACCGCGGTGTGGGGCCGCCTCAGCGTGGGGGACCGCCTCAGTGCCGCGCAGATCACCAGG
CGGTTGTGCGTGTTCCGCAACCGGTATGACGACGCCGTTATCTGCCTCAAACACGGCACA
ATCCCGATGAAGGACAGTGATGTCACCATCTACATGCTCTCCAAGCTCATCTGGGAGGGC
ACGCGTAGGGGGAGGATAGAGAAGAAGACCCATGTGCCCGACGCGCGCAATGACCCAAGA
GGGTTCGACGAGCTAGCCGAGCTGTACGCTTGCCTCTCCGCAGAGGTAGAGGTGATTGGT
GCGAGGTTTTGTTGGACTGCATGGAAGGGGCGGAGGAAGTGGGCGACGTGCGGAGGAAGC
AGACTGCATGATAGGGGCGAAGGAAGCGTGGGCCGTGGGAGAGCAGGGGCACAAGGGTAG

Peptide Sequence

PEP ID

Zm00001d012358_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:172986860:172987579:-1 gene:Zm00001d012358 transcript:Zm00001d012358_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Tyrosine specific protein phosphatase-like
Sequence

MTSEEHPSYASSNGITTIGSDEHLDPSPSPSTSFDSPSESDDSAASLLLSDDSSESEPII
FKKPHPPVRSWLASDEIVILKTVVSHRQKHGRLPLADNLATAVWGRLSVGDRLSAAQITR
RLCVFRNRYDDAVICLKHGTIPMKDSDVTIYMLSKLIWEGTRRGRIEKKTHVPDARNDPR
GFDELAELYACLSAEVEVIGARFCWTAWKGRRKWATCGGSRLHDRGEGSVGRGRAGAQG

Transcript Sequence

Transcript ID

Zm00001d012358_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:172986860:172987579:-1 gene:Zm00001d012358 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Tyrosine specific protein phosphatase-like
Sequence

ATGACATCGGAGGAGCACCCCTCGTATGCGTCCTCAAATGGCATCACCACCATCGGCTCC
GATGAACATCTTGATCCCTCGCCATCACCTTCGACGTCCTTCGACTCTCCTTCTGAATCT
GATGACTCCGCCGCCTCCTTGCTGCTCTCGGACGACTCTTCAGAGTCCGAGCCCATCATT
TTCAAGAAACCCCACCCACCCGTGCGCTCGTGGCTGGCCTCCGATGAGATCGTGATCCTC
AAGACCGTCGTGTCGCACCGGCAGAAGCACGGGCGACTTCCCCTGGCAGACAACCTCGCC
ACCGCGGTGTGGGGCCGCCTCAGCGTGGGGGACCGCCTCAGTGCCGCGCAGATCACCAGG
CGGTTGTGCGTGTTCCGCAACCGGTATGACGACGCCGTTATCTGCCTCAAACACGGCACA
ATCCCGATGAAGGACAGTGATGTCACCATCTACATGCTCTCCAAGCTCATCTGGGAGGGC
ACGCGTAGGGGGAGGATAGAGAAGAAGACCCATGTGCCCGACGCGCGCAATGACCCAAGA
GGGTTCGACGAGCTAGCCGAGCTGTACGCTTGCCTCTCCGCAGAGGTAGAGGTGATTGGT
GCGAGGTTTTGTTGGACTGCATGGAAGGGGCGGAGGAAGTGGGCGACGTGCGGAGGAAGC
AGACTGCATGATAGGGGCGAAGGAAGCGTGGGCCGTGGGAGAGCAGGGGCACAAGGGTAG