Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012312_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:172215664:172217156:1 gene:Zm00001d012312 gene_biotype:protein_coding transcript_biotype:protein_coding description:Undecaprenyl pyrophosphate synthetase

Sequence

ATGCTGTTCTCCCGTTCCCCGGCTGCCACAAATCAGCCACTCGTCCCTTCCCGCCGGACG
CTGCTCCTATCGCCATGCCCGCGAGCCGGCGCGACCCCGGCACCGGTGGCCGACGCTGCG
CTCCTACCGGGCGGGCTGCGTGCGGAGTCGCTGCCGCGGCACGTGGCTGTGGTGATGGAC
GGGAACTCGCGGTGGGCGCGCGCGCGCGGGCTGCCGTCCGCAGCCGGGCACGAGGCCGGG
CGCCGCGCGCTGGAGGAGGTGGTGCGGCTCTCCCGCGCCTGGGGCGTCCGCACGCTCACC
GCCTTCGCCTTCTCCCACGAGAACTGGAGCCGGCCCAAGGTGGAGGTGGAATTCTTGATG
GGGCAGTTTGAGCGAGCGATCCGCGAAAGCGTAGCTGAATTTTTGAGAGAAGGAATTCGG
CTACGCGTAATCGGCGACTCCTCAAGGCTGCCGGTTTCTCTTCAGAGGACCGCGAGAGAA
GCCGAGGAGGCCACGCGGAACAACTCGCAGCTCGACCTGACACTGGCAATCAGCTACAGC
GGGCGGAGGGACATAGTGCAGGCGTGCCGGACCCTAGCCCAGAAGGTGCGCGACAAGCTG
CTCGAGCCGGAGGACATCGACGAGTCGCTGTTCGCCGGTGAGCTCGAGACGAGCCACGCC
AACGGCAACGAGCTCCCTTATCCCGACCTGGTCATCAGAACCAGCGGCGAACTGCGGCTG
AGCAACTTCCTGCTGTGGCAGTCGGCGTACGCGGAGCTCTTCTTCACGGACACGCTGTGG
CCCGACTTCGGAGAGGCCGATTACCTCCAAGCGCTGGTCTCGTTCCAGAGCAGAGACAGG
CGGTTCGGCGTAAGGAAATTGTAG

Peptide Sequence

PEP ID

Zm00001d012312_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:172215664:172217156:1 gene:Zm00001d012312 transcript:Zm00001d012312_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Undecaprenyl pyrophosphate synthetase

Sequence

MLFSRSPAATNQPLVPSRRTLLLSPCPRAGATPAPVADAALLPGGLRAESLPRHVAVVMD
GNSRWARARGLPSAAGHEAGRRALEEVVRLSRAWGVRTLTAFAFSHENWSRPKVEVEFLM
GQFERAIRESVAEFLREGIRLRVIGDSSRLPVSLQRTAREAEEATRNNSQLDLTLAISYS
GRRDIVQACRTLAQKVRDKLLEPEDIDESLFAGELETSHANGNELPYPDLVIRTSGELRL
SNFLLWQSAYAELFFTDTLWPDFGEADYLQALVSFQSRDRRFGVRKL

Transcript Sequence

Transcript ID

Zm00001d012312_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:172215664:172217156:1 gene:Zm00001d012312 gene_biotype:protein_coding transcript_biotype:protein_coding description:Undecaprenyl pyrophosphate synthetase

Sequence

AAGTCGTTCGGCTCGGCGCACTGGGTATAGCAGTAGCAGCACTGCCGCGGTTGATTTTCG
AGCTGCGGTGCTGGAGAAGTGAAGAGCTCATGCTGTTCTCCCGTTCCCCGGCTGCCACAA
ATCAGCCACTCGTCCCTTCCCGCCGGACGCTGCTCCTATCGCCATGCCCGCGAGCCGGCG
CGACCCCGGCACCGGTGGCCGACGCTGCGCTCCTACCGGGCGGGCTGCGTGCGGAGTCGC
TGCCGCGGCACGTGGCTGTGGTGATGGACGGGAACTCGCGGTGGGCGCGCGCGCGCGGGC
TGCCGTCCGCAGCCGGGCACGAGGCCGGGCGCCGCGCGCTGGAGGAGGTGGTGCGGCTCT
CCCGCGCCTGGGGCGTCCGCACGCTCACCGCCTTCGCCTTCTCCCACGAGAACTGGAGCC
GGCCCAAGGTGGAGGTGGAATTCTTGATGGGGCAGTTTGAGCGAGCGATCCGCGAAAGCG
TAGCTGAATTTTTGAGAGAAGGAATTCGGCTACGCGTAATCGGCGACTCCTCAAGGCTGC
CGGTTTCTCTTCAGAGGACCGCGAGAGAAGCCGAGGAGGCCACGCGGAACAACTCGCAGC
TCGACCTGACACTGGCAATCAGCTACAGCGGGCGGAGGGACATAGTGCAGGCGTGCCGGA
CCCTAGCCCAGAAGGTGCGCGACAAGCTGCTCGAGCCGGAGGACATCGACGAGTCGCTGT
TCGCCGGTGAGCTCGAGACGAGCCACGCCAACGGCAACGAGCTCCCTTATCCCGACCTGG
TCATCAGAACCAGCGGCGAACTGCGGCTGAGCAACTTCCTGCTGTGGCAGTCGGCGTACG
CGGAGCTCTTCTTCACGGACACGCTGTGGCCCGACTTCGGAGAGGCCGATTACCTCCAAG
CGCTGGTCTCGTTCCAGAGCAGAGACAGGCGGTTCGGCGTAAGGAAATTGTAGCGGCGCA
GAGGCAGCGCCATGTGGAAGGCGTGCTTCAAACTGTCAATAGCAGGAAAGCGTCGGTCAA
TAAATCGTAACGCGAGACCAAGATGAGTAGATGGAGTATTAAAGTGGTGGTTTGCATGCA
GCGGTGAGAGTGAGAGTAATGTAGCATATCAACTCAAGATGGTAGGTACTACAGCTAGAG
TTCAAGCTCACAGACAGCAGTCGTCGTTGATGATGGTGGCTAGCAGCTATCTGCCGATGG
CCACAGATTTATTGTTAAAAACCCTTTGCTATTGCAAGAGTACGTCAAATGCCCTTTATT
AAGTCGTGATAAAATAA