Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012286_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:8:171908441:171912409:1 gene:Zm00001d012286 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorting nexin 1
Sequence	ATGGATCCCGTCAAGATGGGCACCGGCGTGCAGGCCTACATCTCCTACCGCGTCATCACC AAGACCAACCTCCCTGAATTTGAGGGACCAGAGAAAATTGTTATTCGACGCTATAGTGAT TTTGAATGGTTGCATGATCGGCTTGCTGAGAGGTACAAAGGCGTTTTTATACCTCCCCTT CCGGAGAAGAATGCTGTTGAGAAATTCCGGTTTAGCAAGGAGTTCATTGAATTGCGTCGT CAAGCTTTGGATTTATTTGTTAACAGGATAGCTTCACACCCTGAACTCAAGCAAAGTGAT GTCTTGAGGACATTTTTGCAGGCAGATGAAGAGATAATGGATAGGGCAAGATCTTATGAG ACCGGTATTTTTAAGAAACCATCAGATTTTTTACAGATGTTTAAGGACGTACAGTCAAAA GTCAGTGATGTTGTTCTGGGAAAAGAAAAGCCCGTGGAGGAATCTACTCCTGAATATGAG AAGCTTAAAAGTTACATATTTGAGCTAGAAATTCATTTAGCAGAGGCCCAAAAACAAGCA TACCGTCTTGTGAAAAGACACAGAGAACTTGGACAATCTTTGGCGGACTTCGGAAAGGCG ATTAAGCTTTTGGGCTCTTGTGAAGGAGATTTGATGGAAAAGGTGTTTTCTGAAGTTGGT TCAAAGTCAGAGATGTTGTCAATAAAGCTACAAAGAGAGGCAGACAACCTTCTCTTTAAC TTTGAAGAACCCTTGAAAGATTATGTGCGTGCTCTACAATCTATAAAAGCCACTATGCTG GATCGAGCTAATGCTTTCAGGCAGCACTTTGATTTGGATCAGGAGAGGAAGTATAAAGAG CTTAATCTTGAAAAATTGAAGTTCATGAACCCTGAGAAGTATGCCGAAGCAGAATCTGAG TTTAGAGGGTTGAAAGCAGACAGTGAGGAGGCTACGAAGAAGTTTGAACACATAGTAAGA CTAATGAACGAAGAGCTCTCTCGTTTCCAGGAGCAGAAAACAGCTGACATTGGACTCGCA TTCCATGAATTTGCCAAGGGTCAGGCTAAGCTAGCTAAGGACATTGCGGATGCATGGCGC AGCGTCCTCCCAAAGCTCGAAGCTTGTTCCACATCATAA

Peptide Sequence

PEP ID	Zm00001d012286_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:8:171908441:171912409:1 gene:Zm00001d012286 transcript:Zm00001d012286_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorting nexin 1
Sequence	MDPVKMGTGVQAYISYRVITKTNLPEFEGPEKIVIRRYSDFEWLHDRLAERYKGVFIPPL PEKNAVEKFRFSKEFIELRRQALDLFVNRIASHPELKQSDVLRTFLQADEEIMDRARSYE TGIFKKPSDFLQMFKDVQSKVSDVVLGKEKPVEESTPEYEKLKSYIFELEIHLAEAQKQA YRLVKRHRELGQSLADFGKAIKLLGSCEGDLMEKVFSEVGSKSEMLSIKLQREADNLLFN FEEPLKDYVRALQSIKATMLDRANAFRQHFDLDQERKYKELNLEKLKFMNPEKYAEAESE FRGLKADSEEATKKFEHIVRLMNEELSRFQEQKTADIGLAFHEFAKGQAKLAKDIADAWR SVLPKLEACSTS

Transcript Sequence

Transcript ID	Zm00001d012286_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:171908441:171912409:1 gene:Zm00001d012286 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorting nexin 1
Sequence	GCCATGATCTCGCCGGTAACCACTATGCCCGCTCCCCCGCATCATCTCTTATGCCGCGCT TTTGACGATTGGTTCGGTCGGTTGTAAATTGGTGCTGAATCTGTATACGGGGCTCTCGCA GGAGAGGAGTTCGTCACAGAGCCCGCGGTCGCAGGCGGTGGCGGGGGCGCCATTCCTGTG GATATCTGTCATGGATCCCGTCAAGATGGGCACCGGCGTGCAGGCCTACATCTCCTACCG CGTCATCACCAAGACCAACCTCCCTGAATTTGAGGGACCAGAGAAAATTGTTATTCGACG CTATAGTGATTTTGAATGGTTGCATGATCGGCTTGCTGAGAGGTACAAAGGCGTTTTTAT ACCTCCCCTTCCGGAGAAGAATGCTGTTGAGAAATTCCGGTTTAGCAAGGAGTTCATTGA ATTGCGTCGTCAAGCTTTGGATTTATTTGTTAACAGGATAGCTTCACACCCTGAACTCAA GCAAAGTGATGTCTTGAGGACATTTTTGCAGGCAGATGAAGAGATAATGGATAGGGCAAG ATCTTATGAGACCGGTATTTTTAAGAAACCATCAGATTTTTTACAGATGTTTAAGGACGT ACAGTCAAAAGTCAGTGATGTTGTTCTGGGAAAAGAAAAGCCCGTGGAGGAATCTACTCC TGAATATGAGAAGCTTAAAAGTTACATATTTGAGCTAGAAATTCATTTAGCAGAGGCCCA AAAACAAGCATACCGTCTTGTGAAAAGACACAGAGAACTTGGACAATCTTTGGCGGACTT CGGAAAGGCGATTAAGCTTTTGGGCTCTTGTGAAGGAGATTTGATGGAAAAGGTGTTTTC TGAAGTTGGTTCAAAGTCAGAGATGTTGTCAATAAAGCTACAAAGAGAGGCAGACAACCT TCTCTTTAACTTTGAAGAACCCTTGAAAGATTATGTGCGTGCTCTACAATCTATAAAAGC CACTATGCTGGATCGAGCTAATGCTTTCAGGCAGCACTTTGATTTGGATCAGGAGAGGAA GTATAAAGAGCTTAATCTTGAAAAATTGAAGTTCATGAACCCTGAGAAGTATGCCGAAGC AGAATCTGAGTTTAGAGGGTTGAAAGCAGACAGTGAGGAGGCTACGAAGAAGTTTGAACA CATAGTAAGACTAATGAACGAAGAGCTCTCTCGTTTCCAGGAGCAGAAAACAGCTGACAT TGGACTCGCATTCCATGAATTTGCCAAGGGTCAGGCTAAGCTAGCTAAGGACATTGCGGA TGCATGGCGCAGCGTCCTCCCAAAGCTCGAAGCTTGTTCCACATCATAAAGTGTGATCCG TGTTTCCTCATGATGTTTGGGAAGGGGTTGGTAGCTGGTGAGGTTTAGGCTGTTTTTTTT TTCCAGCCTGTTTTGACACGGATTCCTGTATACTTGAACTGCGGGTTGGAAATGTACCAG CTGTTAGATTCAGTTGACATAATTTCTTGCTGTTTGAG