Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012267_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:171610394:171615563:1 gene:Zm00001d012267 gene_biotype:protein_coding transcript_biotype:protein_coding description:NPL4-like protein 1
Sequence

ATGATCCTCCGTATCCGCAGCCGCGACGGCACGGACCGCATCACGGTCCCAGACTCGGCC
TCAGTCACCGTCGCCGACCTGCAGCGCCTCATCGAGTCGCACCTCACCGTGCCCGTCCCG
CTCCAGCGCCTCTCCCTCGACCCGGCCCTCCTGCTCCCTAACCCCTCCGCCGTTGTCCCA
CTCCTCACCGACTCGGCGGCGCCGCTTGCCTCGCTCCGCCTCGCCAACGGCGCCTTCGTC
TACCTCGCATACCCGCCCGACGCGCGCTCGGCCCGCCCGCCGCCGCCCAAGGCACTTTCC
GCCGCTGGCTCTTTCGGCAAAAAGATGACCATGGATGACCTTATCGCGCGCCAGATCCGC
GTCACACGCCAGGAGAACGCGCTCTGCGCCGCCGCCTCTTTTGACCGCGATGCCGCCAAC
GCGTTCCAGCTCTACGTCGCCGAGTTCCTCGGCTTCGGCGTCAAGCGGGCGGGTTTCCTC
TACGGCCGCGTCGACGCAGAGACCAAGGATGTCTTCGTCGACTTTATCTATGAGCCGCCG
CAGCAGGGCTCCGAGGACGTGGTCCACCTCTTGAGGGACCCCGACGAGGAGGCCCGCGTC
GATACCATCGCCGAGGGGCTCGGGATGCGCCGGGTCGGCCTCGTGTTCACGCAGGCCGTT
GGGAGAAAGGCCAGCGAGACTGGTGAGTACACCATGTCCAACCGGGAGGTCGTGCAGGCG
GCCCAGCTGCAGGCTGAGGGCGGGATCCCGGAGTGGGTCACCGCCATAGTCAAACTGGAG
GTGGGGGATGACGGCACCGGGGATGTGCACTTCGAGGCCTTCCAGATGAGTGAGATTTGT
GTCAAGCTCTTCAAGGATGGGGTACTGGAAACTGAGGTTCAGGATGCTGATGATCCCCGT
CTGTCAAAGATGCGGAAAGAGGTGGTGGCTGGGGGGAAGGATACTATGGAGGTGGATAAT
GACTTCTTCCTCGTGCCCGTCAAGATCTCTGATCACCAGGGTCCACTCTCAGTAGGCTTT
CCTATAGAGAACCGTGGAAATCCTGTGAGCATCAGCGCGTTGAGAAGTCACCTGGAGCGG
ATGAAGCATTTGGCATTTGTGAAGCGGATCTCGGACTTCCATTTGCTCCTCAAGCTCGCT
ACTTTCCTAGATGTAAAGGCAGACATGCCTACTATAGCTGCATGTGTGAAAACTCAGAGC
AGGGTGCCCGAGGGGTACCAGCTTCTGATCGAGTCCTTTGCTAGCCAGGGATAA

Peptide Sequence

PEP ID

Zm00001d012267_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:171610394:171615563:1 gene:Zm00001d012267 transcript:Zm00001d012267_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:NPL4-like protein 1
Sequence

MILRIRSRDGTDRITVPDSASVTVADLQRLIESHLTVPVPLQRLSLDPALLLPNPSAVVP
LLTDSAAPLASLRLANGAFVYLAYPPDARSARPPPPKALSAAGSFGKKMTMDDLIARQIR
VTRQENALCAAASFDRDAANAFQLYVAEFLGFGVKRAGFLYGRVDAETKDVFVDFIYEPP
QQGSEDVVHLLRDPDEEARVDTIAEGLGMRRVGLVFTQAVGRKASETGEYTMSNREVVQA
AQLQAEGGIPEWVTAIVKLEVGDDGTGDVHFEAFQMSEICVKLFKDGVLETEVQDADDPR
LSKMRKEVVAGGKDTMEVDNDFFLVPVKISDHQGPLSVGFPIENRGNPVSISALRSHLER
MKHLAFVKRISDFHLLLKLATFLDVKADMPTIAACVKTQSRVPEGYQLLIESFASQG

Transcript Sequence

Transcript ID

Zm00001d012267_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:171610394:171615563:1 gene:Zm00001d012267 gene_biotype:protein_coding transcript_biotype:protein_coding description:NPL4-like protein 1
Sequence

GGAGACATTCTATTTCACTTTCCAAACACCGCTGTCCCTTCCCCTCCCAGCGCTACCCAC
CATCTCCGCTCTTCCCTCTCCGGCTCATCCCCGCCGGGCTTCCGCCTTCCTGCACACCTC
GCCCCGTTTCTTCCTCGAACAGATTCTCTGCCCCACCCCGATTCTACCTATAAATCACAA
CTGCACACCCCCGAATCCCGGCAAAACCCAACGGCCGAAGCTAAGCTCGAGCCGCCGCCG
CGATGATCCTCCGTATCCGCAGCCGCGACGGCACGGACCGCATCACGGTCCCAGACTCGG
CCTCAGTCACCGTCGCCGACCTGCAGCGCCTCATCGAGTCGCACCTCACCGTGCCCGTCC
CGCTCCAGCGCCTCTCCCTCGACCCGGCCCTCCTGCTCCCTAACCCCTCCGCCGTTGTCC
CACTCCTCACCGACTCGGCGGCGCCGCTTGCCTCGCTCCGCCTCGCCAACGGCGCCTTCG
TCTACCTCGCATACCCGCCCGACGCGCGCTCGGCCCGCCCGCCGCCGCCCAAGGCACTTT
CCGCCGCTGGCTCTTTCGGCAAAAAGATGACCATGGATGACCTTATCGCGCGCCAGATCC
GCGTCACACGCCAGGAGAACGCGCTCTGCGCCGCCGCCTCTTTTGACCGCGATGCCGCCA
ACGCGTTCCAGCTCTACGTCGCCGAGTTCCTCGGCTTCGGCGTCAAGCGGGCGGGTTTCC
TCTACGGCCGCGTCGACGCAGAGACCAAGGATGTCTTCGTCGACTTTATCTATGAGCCGC
CGCAGCAGGGCTCCGAGGACGTGGTCCACCTCTTGAGGGACCCCGACGAGGAGGCCCGCG
TCGATACCATCGCCGAGGGGCTCGGGATGCGCCGGGTCGGCCTCGTGTTCACGCAGGCCG
TTGGGAGAAAGGCCAGCGAGACTGGTGAGTACACCATGTCCAACCGGGAGGTCGTGCAGG
CGGCCCAGCTGCAGGCTGAGGGCGGGATCCCGGAGTGGGTCACCGCCATAGTCAAACTGG
AGGTGGGGGATGACGGCACCGGGGATGTGCACTTCGAGGCCTTCCAGATGAGTGAGATTT
GTGTCAAGCTCTTCAAGGATGGGGTACTGGAAACTGAGGTTCAGGATGCTGATGATCCCC
GTCTGTCAAAGATGCGGAAAGAGGTGGTGGCTGGGGGGAAGGATACTATGGAGGTGGATA
ATGACTTCTTCCTCGTGCCCGTCAAGATCTCTGATCACCAGGGTCCACTCTCAGTAGGCT
TTCCTATAGAGAACCGTGGAAATCCTGTGAGCATCAGCGCGTTGAGAAGTCACCTGGAGC
GGATGAAGCATTTGGCATTTGTGAAGCGGATCTCGGACTTCCATTTGCTCCTCAAGCTCG
CTACTTTCCTAGATGTAAAGGCAGACATGCCTACTATAGCTGCATGTGTGAAAACTCAGA
GCAGGGTGCCCGAGGGGTACCAGCTTCTGATCGAGTCCTTTGCTAGCCAGGGATAATATC
GCATCTGAAAGCATGGCATGGCGATGCATAATTTGTTTACTTGATCACATCATGCATGTG
TAACTTATGGATGTCTCTTGGTGTATAAGTATTGTGTGAATTCCTTCTTTGCCATCAAAA
TATATGTTTATTCCTTCTCATGTCATGAAATAAAAGTTGCCTTCAGTGC