Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012263_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:8:171421260:171426869:-1 gene:Zm00001d012263 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative snRK/SAPK family protein kinase

Sequence

ATGATTGTGATGGAGTTCGCAGCAGGTGGAGAGCTTTTCGATCAGATCTGTGATCGTGGG
CGGTTTAGTGAGGATGAGGCCCGGTATTTCTTTCAGCAGTTGATCTGTGGCGTGAGCTAC
TGCCATTACATGCAAATATGCCATAGAGATCTGAAGCTGGAGAATGTTCTCTTGGATGGC
AGTCCAGCTCCACGGCTTAAGATATGCGATTTTGGCTATTCCAAGTCATCAGTGTTGCAT
TCAAGACCCAAATCAGCTGTGGGAACACCAGCATATATTGCACCCGAGGTGCTATCCCGT
CACGAATACGATGGAAAGCTTGCAGACGTATGGTCCTGTGGGGTGACTCTTTACGTCATG
CTTGTGGGAGCATACCCATTTGAAGACCCAGATGACCCCAAGAATATACGCAAGACCATT
CAGCAAATAATGCAAGTGCAGTACAAGATACCAGATTATGTCCACATATCTACGGAATGC
CAGCAACTTATTGCCCGTATCTTTGTTGCCAATCCAGTGAGGAGAATCACAATGAAGGAA
ATAAAGAGCCATCCATGGTTTTTGAAGAACCTACCACGGGAACTCACGGAGACTGCACAA
GGCATGTACTACAGGAGGGATAACAAGGTGCCTTCTTATTCAGACCAAACGTCGGAAGAA
ATCATGAAGATAGTTCGTGATGCAAGGACCATGCCGAAATCATCCAGATCAGGCTATGGG
TGGAGCGCTGAGTATTCGGATGAAGAAGAGAAGGAAGAGGAACACAGACTAGAGGAAGAT
GAATACGATAGGAGGGTGAAGGAGGTCCATGCAAGCGGAGAACTCCGTATGGACACTCTT
CACATATGA

Peptide Sequence

PEP ID

Zm00001d012263_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:8:171421260:171426869:-1 gene:Zm00001d012263 transcript:Zm00001d012263_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative snRK/SAPK family protein kinase

Sequence

MIVMEFAAGGELFDQICDRGRFSEDEARYFFQQLICGVSYCHYMQICHRDLKLENVLLDG
SPAPRLKICDFGYSKSSVLHSRPKSAVGTPAYIAPEVLSRHEYDGKLADVWSCGVTLYVM
LVGAYPFEDPDDPKNIRKTIQQIMQVQYKIPDYVHISTECQQLIARIFVANPVRRITMKE
IKSHPWFLKNLPRELTETAQGMYYRRDNKVPSYSDQTSEEIMKIVRDARTMPKSSRSGYG
WSAEYSDEEEKEEEHRLEEDEYDRRVKEVHASGELRMDTLHI

Transcript Sequence

Transcript ID

Zm00001d012263_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:171421260:171426869:-1 gene:Zm00001d012263 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative snRK/SAPK family protein kinase

Sequence

ACCGACCCACCGTCCGCCGAGGCGCAACCGCCGCAACGCAAACCCACAAACCCTCCGCCG
CCGCCGCCGCCGCCGTACCACGTACCGTCCCGCTTCTCCTCCGCCCTTGTGCGAGCAGGC
AACGGCAGCAGAGCCCGCACAGGTTGCTCCCGGACGGAGGGAGAACGCGCGGGGCTGGGC
TAGCCGGGGGCGGCCGGAGGAGATTGACGAGAATGTGTACAGGGAGATCATCAACCACCG
CTCCCTGCGCCATCCTAACATTATTCGCTTCAAGGAGGTGATACTTACACCAACACATCT
TATGATTGTGATGGAGTTCGCAGCAGGTGGAGAGCTTTTCGATCAGATCTGTGATCGTGG
GCGGTTTAGTGAGGATGAGGCCCGGTATTTCTTTCAGCAGTTGATCTGTGGCGTGAGCTA
CTGCCATTACATGCAAATATGCCATAGAGATCTGAAGCTGGAGAATGTTCTCTTGGATGG
CAGTCCAGCTCCACGGCTTAAGATATGCGATTTTGGCTATTCCAAGTCATCAGTGTTGCA
TTCAAGACCCAAATCAGCTGTGGGAACACCAGCATATATTGCACCCGAGGTGCTATCCCG
TCACGAATACGATGGAAAGCTTGCAGACGTATGGTCCTGTGGGGTGACTCTTTACGTCAT
GCTTGTGGGAGCATACCCATTTGAAGACCCAGATGACCCCAAGAATATACGCAAGACCAT
TCAGCAAATAATGCAAGTGCAGTACAAGATACCAGATTATGTCCACATATCTACGGAATG
CCAGCAACTTATTGCCCGTATCTTTGTTGCCAATCCAGTGAGGAGAATCACAATGAAGGA
AATAAAGAGCCATCCATGGTTTTTGAAGAACCTACCACGGGAACTCACGGAGACTGCACA
AGGCATGTACTACAGGAGGGATAACAAGGTGCCTTCTTATTCAGACCAAACGTCGGAAGA
AATCATGAAGATAGTTCGTGATGCAAGGACCATGCCGAAATCATCCAGATCAGGCTATGG
GTGGAGCGCTGAGTATTCGGATGAAGAAGAGAAGGAAGAGGAACACAGACTAGAGGAAGA
TGAATACGATAGGAGGGTGAAGGAGGTCCATGCAAGCGGAGAACTCCGTATGGACACTCT
TCACATATGAAAGCTAGTGGAAGAAAGTTACATGTAGATAACTTGTTGTTGTTGATCTGA
AGGATCCAGTGGGATGTATGCAGTTTTGGCTTCTGAATTGCTTGTGCTCGGTCAATTTTC
ATGTAACATAATTC