Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012244_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:170881851:170885565:1 gene:Zm00001d012244 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-like domain-containing CTD phosphatase
Sequence	ATGGCGGCCTCATCATCAGCGGGACCCTCGGCGGTAGACGCGGCCTCTCTCGCCGCGGTG GCGGAGGCGGCGCCGCCGGAGGAGATGACGCTGGTGGTGAAGTGGCGCGGGCAGGAGCAA ACGGTGCGGATGGTGGGGGACGATACGCTCGGTGAGCTCAAACTGCGCATCTGCGAGGTC ACCGGGGTGCTCCCCAAGCGTCAGACGCTACTCTACCCCAAGCTCATACTTAAGGACATG GACGACTCCACCCTCCTCTCCTCCATCCCTTTCAAGCCCAACGGGAAGATCAGCATGATC GGTACAATTGAAGAAGAAATATTTGTCGGCCAAGAAGATGATCCGGAGTTACTTGACGAT TTTGACTTTGAGCAGAATGAAGCTACACCCATTAAGGATAAAGATGTCTACAAGCAAAAA TTAAAGCGACGCGCAAGTCGTTATAAGATCAAGCTCTTGAATCCGTGCCGCAAAGGAAAG AAGCTGCTTGTCCTTGACATTGACTATACTCTGTTTGACCATAAGTCAACAGCTGAGAAT CCTATGGAACTCATGCGCCCATATCTTCACCAGTTCCTCACAGCTGCATATGCAAAATAT GACATCATGATATGGTCAGCAACTAGTATGAAATGGGTGGAGTTGAAAATGGAACAACTT GGAGTTCTTAGCAACCCTGACTTCAAAATTACTGCTCTTATGGATCACTTGGCTATGATA ACTGTGCAATCTGAAAATCAAAGTAGAAAGAAGACTTTTGACTGCAAGCCTCTTGGTGTC ATTTGGGCTCAGTTCCCTGAGTACTACAACGAAAAGAACACCATAATGTTTGATGATCTA AGAAGGAATTTCGTCATGAATCCACAGAACGGTCTCGTGATCAAGCCATTCAGGAAAGCG CACTCGAACAGGCATGATGATCACGAGCTGGTAAAGCTTACACACTACCTGCTTTCGATC GGAGACCTAGAAGATCTCAGCAAGCTTGACCACGGTAAATGGGAGTCCTTTGTAGATGAG AGCGTAAAGAGACGCAAGCGCTCTTAG

Peptide Sequence

PEP ID	Zm00001d012244_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:170881851:170885565:1 gene:Zm00001d012244 transcript:Zm00001d012244_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-like domain-containing CTD phosphatase
Sequence	MAASSSAGPSAVDAASLAAVAEAAPPEEMTLVVKWRGQEQTVRMVGDDTLGELKLRICEV TGVLPKRQTLLYPKLILKDMDDSTLLSSIPFKPNGKISMIGTIEEEIFVGQEDDPELLDD FDFEQNEATPIKDKDVYKQKLKRRASRYKIKLLNPCRKGKKLLVLDIDYTLFDHKSTAEN PMELMRPYLHQFLTAAYAKYDIMIWSATSMKWVELKMEQLGVLSNPDFKITALMDHLAMI TVQSENQSRKKTFDCKPLGVIWAQFPEYYNEKNTIMFDDLRRNFVMNPQNGLVIKPFRKA HSNRHDDHELVKLTHYLLSIGDLEDLSKLDHGKWESFVDESVKRRKRS

Transcript Sequence

Transcript ID	Zm00001d012244_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:170881851:170885565:1 gene:Zm00001d012244 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-like domain-containing CTD phosphatase
Sequence	AGTGCTCTAACTAAACCAAATATGGCCATAGTACTAGAGAATCCCCGACAGGATTTAGCA CTCCATACATTTTCCCTGCAACTCGGTCGGTTCTCCTTCCCCATATCGTTCCTCTCCTGA TACGTGGCGAAGGAGGAACTGAACGTCTGAATCTGAACCCTTTCGTTCCTCTCCTATTCG AACTCCTCGCAGCCAAATCCGATGGCGGCCTCATCATCAGCGGGACCCTCGGCGGTAGAC GCGGCCTCTCTCGCCGCGGTGGCGGAGGCGGCGCCGCCGGAGGAGATGACGCTGGTGGTG AAGTGGCGCGGGCAGGAGCAAACGGTGCGGATGGTGGGGGACGATACGCTCGGTGAGCTC AAACTGCGCATCTGCGAGGTCACCGGGGTGCTCCCCAAGCGTCAGACGCTACTCTACCCC AAGCTCATACTTAAGGACATGGACGACTCCACCCTCCTCTCCTCCATCCCTTTCAAGCCC AACGGGAAGATCAGCATGATCGGTACAATTGAAGAAGAAATATTTGTCGGCCAAGAAGAT GATCCGGAGTTACTTGACGATTTTGACTTTGAGCAGAATGAAGCTACACCCATTAAGGAT AAAGATGTCTACAAGCAAAAATTAAAGCGACGCGCAAGTCGTTATAAGATCAAGCTCTTG AATCCGTGCCGCAAAGGAAAGAAGCTGCTTGTCCTTGACATTGACTATACTCTGTTTGAC CATAAGTCAACAGCTGAGAATCCTATGGAACTCATGCGCCCATATCTTCACCAGTTCCTC ACAGCTGCATATGCAAAATATGACATCATGATATGGTCAGCAACTAGTATGAAATGGGTG GAGTTGAAAATGGAACAACTTGGAGTTCTTAGCAACCCTGACTTCAAAATTACTGCTCTT ATGGATCACTTGGCTATGATAACTGTGCAATCTGAAAATCAAAGTAGAAAGAAGACTTTT GACTGCAAGCCTCTTGGTGTCATTTGGGCTCAGTTCCCTGAGTACTACAACGAAAAGAAC ACCATAATGTTTGATGATCTAAGAAGGAATTTCGTCATGAATCCACAGAACGGTCTCGTG ATCAAGCCATTCAGGAAAGCGCACTCGAACAGGCATGATGATCACGAGCTGGTAAAGCTT ACACACTACCTGCTTTCGATCGGAGACCTAGAAGATCTCAGCAAGCTTGACCACGGTAAA TGGGAGTCCTTTGTAGATGAGAGCGTAAAGAGACGCAAGCGCTCTTAGTTTCCGTCAGTA TAGTGACTGTCAGAAAGAAAAACAGAACACCCATTTTCTTTTCTTTTCAGTGCTACGGAT ACCTCGCAGATTAGAGTAACCGAATGACCAGGATTTACTTTGAACAATCTGGGGCTTCAG CCTCGTCAAGTTACAGTGCTTCCTGCTTCCTGAATCTATGCTCAAAACTTTTAATCTTGC GCTGATTTTTGCCC