Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012240_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:8:170777884:170781491:1 gene:Zm00001d012240 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUN domain protein4 description:SUN4
Sequence	ATGTCCTTGTCGTGTTGGAGGGTGCGGTTTCCTGGTGCGGATGTGAGGGAAGCCGGGAGG GGCAGGGAAGGAATGCAGAGGTCGCGGAAGGCCCTTCTGCGGAGGACGGCGGCGGCGCAG GTGCAGAGCGCAGTGGCGGAGGCTGCTGGTAACGGGAGGAAGAGGCGTCTGTACGGCTTC TCCGTCTCCCTCGTCGTCACCTTGTGGGTCGCCGTGCTCCTGCTCCACTCCCTGGTCGGG CACGGCGATGGTCAACGAGATGGAGGCGGTTCTGGTGTCGATATTACTTTTATCGAGCCT GCCTTGAATGGTGGTCCTGTTAATTCGGCTGTACAGGAAGTGCATGGAGAGAATTTGGCA GTGCCGGGTGATACCTGTGTTGGATCTGTCGAAAATGCTGTGCTTCCAGAGGACACGCTG GTGCAAGCAGCTCAGTTGTGCTCCAATGATGAGGCACGGAGTGAGAACACAGAAGCTCTA ACAAAAAACAATCAGGTTGAGCTTTCAGGGGATCAGTGTGGGTATCTTCCTCAGCCAGAT TTTGATTCTGGAGTTCAACCAGGGGAGAAGGTGGAGAGTGAAGATTTGCCGAGACCACCA AGACTATCACGGGTTGCTCCTCCTGATCTTGATGAATTCAAGACAAGAGCAATTGCTGAA AGGGGACCTGGTATTTCTAGTCAACCTGGTAATGTCATCCACCGAAGGGAGCCTAGCGGG AAGTTGTATAATTATGCCGCGGCATCTAAAGGGGCTAAGGTTCTGGATTTCAATAAGGAG GCTAAGGGTGCTTCCAACATCTTAGATAAAGACAAAGACAAGTACCTCCGCAATGCTTGC TCAGCAGAGGGGAAGTTTGTCATCATAGAGCTTTCTGAAGAAACTTTAGTAGATACAATT GCAATCGCAAATTTTGAGCATTATTCGTCTAATCCAAAAGAATTTGAACTGCTGAGCAGT CTGACATATCCCACAGAAAACTGGGAAACTCTTGGAAGATTCACTGCCGCAAATGCAAGG CTTGCTCAGAATTTTACTTTTCTTGAGCCAAAGTGGGCTAGATATTTGAAACTGAACTTG GTAAGCCATTATGGTTCTGAGTTCTACTGTACTCTCAGTATGCTCGAAGTGTATGGAATG GATGCTGTAGAAAAGATGCTTGAAAACTTGATTCCAGTTGAGCATAAGAAAACGGAACCT GGTGGCAAGTTAAAGGAACCCATTGAGCAAATTCCTTTGAAAGAGTCTGCTGGAGGAAAG GAATCCTCACAGGAACCACTTGACGAAGATGAATTTGAACTAGAAGATGGTAAACCAAAT GGACATGGTGATCCATCGAAGAATGGTGCTAGTGATCCAGTTTCAGAGACAAGGACACTT CAGGCTGGCAGGATTCCTGGAGATACTGTTCTTAAGGTGCTAATGCAGAAAGTTCAATCT CTTGACGTGAGCTTCTCTGTCTTGGAGAGGTACCTAGTGGAGTTGAACAACAGATATGGG CAAATATTTAAAGATTTTGATTCCGATATTGATAGCAAAGATGCCTTGTTAGAGAAGATC AAAACAGAGCTGAAGAATCTTGAGAGCAGCAAGGACAGCATTGTATGTATATGTCTGTAC TTAAATTTTCCTTGA

Peptide Sequence

PEP ID	Zm00001d012240_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:8:170777884:170781491:1 gene:Zm00001d012240 transcript:Zm00001d012240_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUN domain protein4 description:SUN4
Sequence	MSLSCWRVRFPGADVREAGRGREGMQRSRKALLRRTAAAQVQSAVAEAAGNGRKRRLYGF SVSLVVTLWVAVLLLHSLVGHGDGQRDGGGSGVDITFIEPALNGGPVNSAVQEVHGENLA VPGDTCVGSVENAVLPEDTLVQAAQLCSNDEARSENTEALTKNNQVELSGDQCGYLPQPD FDSGVQPGEKVESEDLPRPPRLSRVAPPDLDEFKTRAIAERGPGISSQPGNVIHRREPSG KLYNYAAASKGAKVLDFNKEAKGASNILDKDKDKYLRNACSAEGKFVIIELSEETLVDTI AIANFEHYSSNPKEFELLSSLTYPTENWETLGRFTAANARLAQNFTFLEPKWARYLKLNL VSHYGSEFYCTLSMLEVYGMDAVEKMLENLIPVEHKKTEPGGKLKEPIEQIPLKESAGGK ESSQEPLDEDEFELEDGKPNGHGDPSKNGASDPVSETRTLQAGRIPGDTVLKVLMQKVQS LDVSFSVLERYLVELNNRYGQIFKDFDSDIDSKDALLEKIKTELKNLESSKDSIVCICLY LNFP

Transcript Sequence

Transcript ID	Zm00001d012240_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:170777884:170781491:1 gene:Zm00001d012240 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUN domain protein4 description:SUN4
Sequence	GGAGCTCCGGCCGTTTCAAAAACCCCTATCCCCCGCCCCGCGCCACGCGGCTGCGTCTGC GCATCCTCGGCCCTTGGCCCGCGTCGCCTTGCGCCGGACGCCGCGCTGCTTCTGATTTCC GACCTCTCCTACTGGGGGGTCGGCCGGATTCCGCATGTCCTTGTCGTGTTGGAGGGTGCG GTTTCCTGGTGCGGATGTGAGGGAAGCCGGGAGGGGCAGGGAAGGAATGCAGAGGTCGCG GAAGGCCCTTCTGCGGAGGACGGCGGCGGCGCAGGTGCAGAGCGCAGTGGCGGAGGCTGC TGGTAACGGGAGGAAGAGGCGTCTGTACGGCTTCTCCGTCTCCCTCGTCGTCACCTTGTG GGTCGCCGTGCTCCTGCTCCACTCCCTGGTCGGGCACGGCGATGGTCAACGAGATGGAGG CGGTTCTGGTGTCGATATTACTTTTATCGAGCCTGCCTTGAATGGTGGTCCTGTTAATTC GGCTGTACAGGAAGTGCATGGAGAGAATTTGGCAGTGCCGGGTGATACCTGTGTTGGATC TGTCGAAAATGCTGTGCTTCCAGAGGACACGCTGGTGCAAGCAGCTCAGTTGTGCTCCAA TGATGAGGCACGGAGTGAGAACACAGAAGCTCTAACAAAAAACAATCAGGTTGAGCTTTC AGGGGATCAGTGTGGGTATCTTCCTCAGCCAGATTTTGATTCTGGAGTTCAACCAGGGGA GAAGGTGGAGAGTGAAGATTTGCCGAGACCACCAAGACTATCACGGGTTGCTCCTCCTGA TCTTGATGAATTCAAGACAAGAGCAATTGCTGAAAGGGGACCTGGTATTTCTAGTCAACC TGGTAATGTCATCCACCGAAGGGAGCCTAGCGGGAAGTTGTATAATTATGCCGCGGCATC TAAAGGGGCTAAGGTTCTGGATTTCAATAAGGAGGCTAAGGGTGCTTCCAACATCTTAGA TAAAGACAAAGACAAGTACCTCCGCAATGCTTGCTCAGCAGAGGGGAAGTTTGTCATCAT AGAGCTTTCTGAAGAAACTTTAGTAGATACAATTGCAATCGCAAATTTTGAGCATTATTC GTCTAATCCAAAAGAATTTGAACTGCTGAGCAGTCTGACATATCCCACAGAAAACTGGGA AACTCTTGGAAGATTCACTGCCGCAAATGCAAGGCTTGCTCAGAATTTTACTTTTCTTGA GCCAAAGTGGGCTAGATATTTGAAACTGAACTTGGTAAGCCATTATGGTTCTGAGTTCTA CTGTACTCTCAGTATGCTCGAAGTGTATGGAATGGATGCTGTAGAAAAGATGCTTGAAAA CTTGATTCCAGTTGAGCATAAGAAAACGGAACCTGGTGGCAAGTTAAAGGAACCCATTGA GCAAATTCCTTTGAAAGAGTCTGCTGGAGGAAAGGAATCCTCACAGGAACCACTTGACGA AGATGAATTTGAACTAGAAGATGGTAAACCAAATGGACATGGTGATCCATCGAAGAATGG TGCTAGTGATCCAGTTTCAGAGACAAGGACACTTCAGGCTGGCAGGATTCCTGGAGATAC TGTTCTTAAGGTGCTAATGCAGAAAGTTCAATCTCTTGACGTGAGCTTCTCTGTCTTGGA GAGGTACCTAGTGGAGTTGAACAACAGATATGGGCAAATATTTAAAGATTTTGATTCCGA TATTGATAGCAAAGATGCCTTGTTAGAGAAGATCAAAACAGAGCTGAAGAATCTTGAGAG CAGCAAGGACAGCATTGTATGTATATGTCTGTACTTAAATTTTCCTTGAGCTATTGAGCA TCTGCTAATTTGGTATTTAATGATATATTTTCTTGGTTTCAGATGAATGAAATTGAAGGT ATCATCTCCTGGAAAGTAGTTGCTTCCTCGCAACTAAACCAGCTTGTCCTAGATAATGCT CTACTCAGATCGGAATTTGAAACATTTCGGCAAAAACAGGCTGACATGGAGAACAGGAGT CTTGCCGTTATTTTCCTCAGTTTTGTTTTCGCTTGCCTAGCTCTTGCTAAGCTGTCTATA GGCATCATGTCCAGATTTTGTAGATTCTATGACTTTGAGAAGTTCCATAATGTAAGATCC GGGTGGCTTGTGCTGCTGCTTAGCAGTTGCATCATATCCACCATTTTGATAATACAGTAA CACAAGCATTCAACCTCACATGTTCAAGGAATCAAGGCTGTACATTATAGTCGCATGAGG TTTCTGTTTCAAAAACAAACTATACCTCTTTCACAGCTCATGCAATTTCAAACAGCGCAG TTGTTTCGCGCCATTAGTTGCTGTCTCAGTTCGGAGGTCCTTTTACAGCCGCAGCAGCAG CAGCAGACTACTGCGAGTAGAATATTTTTCTTGTTCCGCTCAAGGTTTTGGGGAATGTAA AGCAAATCGACCTGGAAAGCATGTGCAGTCTACCTGGCATACTTGTGGATCGGCGCGCTT CTTTATTTGTTCAAGGAACCAGAGCATGGTCCCCATGTGGCTTCCATGTTGCCAATGTAT TCATTGTCATGGAGGCATGGGTTAATAATTAATATACTAGTAGTATTCCTCCTTCCATGA GCACTGTGCAGTCCATGTTCTTCAGCTGGCCTTCTGGCTCGTGCACATGGCCTCAACGCT GGGACTGCCTTGAAAGGCACTGTGGAGTCCATGTTTGTTTCCAGCAGGAAAGGCGTCGCT GATAACTTCAGTCAGCACTCAGCAGCAAAGTCAACGCGGAAAAATACTACTACACGATTG TGTGAAGTGAAATCCACTCCTGTCTGGAGCTCTTTTGAGTTGGTTGAGAGTTGAGACCGT GGTTGGGTTGCAGTAGGTCGCTGATGCGGACTAGTCCAAACAGTTTCAGAAATGGTCGGT CATCCACGATGGCTGACAGATTTTGTTTCATATTATGTACAGAAGACGCGAACTGTATGC AAACTATGAATGTGACCAACGGTCAGCTTACTGGGTGTC