Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012239_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:8:170751693:170756148:-1 gene:Zm00001d012239 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

ATGGCGAGGGACCCAGCCCGCACCGTCTTCATAGGTAACTTGGACGAAAAGGTATCTGAG
AGAATCTTGTATGAGATTCTTATTCAGGCAGGCCATGTAGTAGACCTGCATGTACCCAGT
GACAAGGAGAGTAACAGTCTCAAAGGTTACGCTTTTGTTGAGTATGAAACCGAGGAAATC
GCACAATACGCTGTTAAGCTTTTCTCAGGACTTGTTCGGATCAGTGGTAAAACGCTTAAG
TTCATGATTGCTGGTTATGACAAACCGTCTTCAAATGTCAATACCTCAGTAATGCTCAAT
CCTGTACCCTCTTCAAATGGCAATAATCCAGTAACGCCTAAGCTCAACCCTATACCATTA
CCAAAACAGACTCAAATAATGTGTTGTAGTGACATGCCTGTCTCTCGTACCCTAGCATAT
CAGGTGGTAAACGGGAGGATTGGAGGTTATGTCTTTTCTCTCACTCCTTATCCATATGGT
TTTCAAGCTTTATCAGGTGGACAAGTACACGGCCATGGCCAGGTAAGCAACCGTACCTAT
GATTACAATAGGCAGGAATTTGGTTCTGTTCTGAGCATTGTCCATGGAGCGACACATGCA
CGAACAAGAGCACCTGCCCGACTGAGCGTGCACGACCTCGCGCCGATCAGGGCCAAGAAC
TCACCCCCGTCGTGTGTGCCGATGGAGGTGGAGGCCGACGGGATCCAGGAAGCCACCGCA
GGCGCAGGAGACGGCGGCGGCGTGGACGATGTCTTCTTCTGCGTCGCCGCGACGTCCAGG
GGCAACAAGAACAGCATCTCCTACTTCCACACCAACGCGGTCGGCGAGGACGCCGAGTCG
GCGCTCGCGCTCGCCGCGCTCTGCCTCGACCACGCCCCCGACCACCACCGGTGGCACCAC
CACACCGTCGCCGGGGCGAAGACGTTCGCGTTCCTCTCGGCCGACGACGGCCGCACGTAC
TTCGCCGCGGCCGACCCGAGCCCCGGCGCCGCCGAGGTGGTCCGGTTCCTGGAGCGCGTC
CGCGACGCGTGCGACGCCGCGCCCAGGAAGCGCCTGCGCGACGAGGCGGTGGCCCCCGTC
GCTCGCCAGTTCGCCAGGACGCTGCGGGCGGCGGCGGCGGGCCCGAGCTCAGGCGCGGAG
CTACCGGAGGCCTCGCTGCAGGCGAAGGAGCCGTCCACGCCGCTGGCGCCGGTCTGCGAG
AAAGACGAGGAGGAGCGCCAGAGGGCCGGAGAGCGACGTCGCGCCTTCTTGCAGCCGGAG
GAAAGCGCAAGCGCGCTTCCGGGGTGGCGCCCGTGGTGGCGCCACGCGTCGGTCGTGATC
GTCGTGGATGTGGTGCTGTGCCTCGTGCTGTTCGCCGTGTGGATGGGGGTTTGCAAAGGC
TTCGGGTGTCTGACGCGATGA

Peptide Sequence

PEP ID

Zm00001d012239_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:8:170751693:170756148:-1 gene:Zm00001d012239 transcript:Zm00001d012239_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

MARDPARTVFIGNLDEKVSERILYEILIQAGHVVDLHVPSDKESNSLKGYAFVEYETEEI
AQYAVKLFSGLVRISGKTLKFMIAGYDKPSSNVNTSVMLNPVPSSNGNNPVTPKLNPIPL
PKQTQIMCCSDMPVSRTLAYQVVNGRIGGYVFSLTPYPYGFQALSGGQVHGHGQVSNRTY
DYNRQEFGSVLSIVHGATHARTRAPARLSVHDLAPIRAKNSPPSCVPMEVEADGIQEATA
GAGDGGGVDDVFFCVAATSRGNKNSISYFHTNAVGEDAESALALAALCLDHAPDHHRWHH
HTVAGAKTFAFLSADDGRTYFAAADPSPGAAEVVRFLERVRDACDAAPRKRLRDEAVAPV
ARQFARTLRAAAAGPSSGAELPEASLQAKEPSTPLAPVCEKDEEERQRAGERRRAFLQPE
ESASALPGWRPWWRHASVVIVVDVVLCLVLFAVWMGVCKGFGCLTR

Transcript Sequence

Transcript ID

Zm00001d012239_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:170751693:170756148:-1 gene:Zm00001d012239 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

GTGCTGCACTGCATCACACCGATTCCCACGTGATTGCGGCGCGGCCGCGCGAGGAGTGCT
CGTAGCCCTCCCCCCCGCCCGCCCGCCCAGATTCGGTCGCCCATGGCGAGGGACCCAGCC
CGCACCGTCTTCATAGGTAACTTGGACGAAAAGGTATCTGAGAGAATCTTGTATGAGATT
CTTATTCAGGCAGGCCATGTAGTAGACCTGCATGTACCCAGTGACAAGGAGAGTAACAGT
CTCAAAGGTTACGCTTTTGTTGAGTATGAAACCGAGGAAATCGCACAATACGCTGTTAAG
CTTTTCTCAGGACTTGTTCGGATCAGTGGTAAAACGCTTAAGTTCATGATTGCTGGTTAT
GACAAACCGTCTTCAAATGTCAATACCTCAGTAATGCTCAATCCTGTACCCTCTTCAAAT
GGCAATAATCCAGTAACGCCTAAGCTCAACCCTATACCATTACCAAAACAGACTCAAATA
ATGTGTTGTAGTGACATGCCTGTCTCTCGTACCCTAGCATATCAGGTGGTAAACGGGAGG
ATTGGAGGTTATGTCTTTTCTCTCACTCCTTATCCATATGGTTTTCAAGCTTTATCAGGT
GGACAAGTACACGGCCATGGCCAGGTAAGCAACCGTACCTATGATTACAATAGGCAGGAA
TTTGGTTCTGTTCTGAGCATTGTCCATGGAGCGACACATGCACGAACAAGAGCACCTGCC
CGACTGAGCGTGCACGACCTCGCGCCGATCAGGGCCAAGAACTCACCCCCGTCGTGTGTG
CCGATGGAGGTGGAGGCCGACGGGATCCAGGAAGCCACCGCAGGCGCAGGAGACGGCGGC
GGCGTGGACGATGTCTTCTTCTGCGTCGCCGCGACGTCCAGGGGCAACAAGAACAGCATC
TCCTACTTCCACACCAACGCGGTCGGCGAGGACGCCGAGTCGGCGCTCGCGCTCGCCGCG
CTCTGCCTCGACCACGCCCCCGACCACCACCGGTGGCACCACCACACCGTCGCCGGGGCG
AAGACGTTCGCGTTCCTCTCGGCCGACGACGGCCGCACGTACTTCGCCGCGGCCGACCCG
AGCCCCGGCGCCGCCGAGGTGGTCCGGTTCCTGGAGCGCGTCCGCGACGCGTGCGACGCC
GCGCCCAGGAAGCGCCTGCGCGACGAGGCGGTGGCCCCCGTCGCTCGCCAGTTCGCCAGG
ACGCTGCGGGCGGCGGCGGCGGGCCCGAGCTCAGGCGCGGAGCTACCGGAGGCCTCGCTG
CAGGCGAAGGAGCCGTCCACGCCGCTGGCGCCGGTCTGCGAGAAAGACGAGGAGGAGCGC
CAGAGGGCCGGAGAGCGACGTCGCGCCTTCTTGCAGCCGGAGGAAAGCGCAAGCGCGCTT
CCGGGGTGGCGCCCGTGGTGGCGCCACGCGTCGGTCGTGATCGTCGTGGATGTGGTGCTG
TGCCTCGTGCTGTTCGCCGTGTGGATGGGGGTTTGCAAAGGCTTCGGGTGTCTGACGCGA
TGA