Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012237_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:170724735:170730425:1 gene:Zm00001d012237 gene_biotype:protein_coding transcript_biotype:protein_coding description:SnRK1-interacting protein 1

Sequence

ATGGCTCTCGGTGCCCTAGCCCGCCTCCTCCGCCTTGCGCCCACCCCTCGCCTCGCGCGC
CCCTTCGCTGCAAAGGTCCGTGCGTCTCGGCCGCAGGAACCGGAGCTTCCGTCGGAGGAC
GACAACGACTTCGCCGGCGGCGAGCTCACCGCCCCCACCGAGGGCATCGGCAAGCCGCTC
GCCGAGGTGCTCAAAGAGCTCGGGAAGAGGGTTCCGGACTCCCTTGTCAAGACCCGCGTC
GAGAATAATGGCTTCGCTATCAAGTACATCCCATGGCACATTGTGAACAAAATTCTCAAC
ATACATGCTCCAGAGTGGTCGGGTGAGGTACGCAGCATTGTTTACTCATTTGACGGGAAA
ACAGTATCTGTTGTCTATCGAGTGACTCTTCATGGGATTGATGCAGAGATCTATAGAGAG
GCTACTGGAACTGCTTCTGTTGATGATACAAGCTATGGTGATCCCATACAGAAGGCAGAA
GCTATGGCTTTTCGTCGTGCTTGTGCACGTCTTGGTCTTGGACTCCATCTCTACCATGAA
GATATGTCATAG

Peptide Sequence

PEP ID

Zm00001d012237_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:170724735:170730425:1 gene:Zm00001d012237 transcript:Zm00001d012237_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:SnRK1-interacting protein 1

Sequence

MALGALARLLRLAPTPRLARPFAAKVRASRPQEPELPSEDDNDFAGGELTAPTEGIGKPL
AEVLKELGKRVPDSLVKTRVENNGFAIKYIPWHIVNKILNIHAPEWSGEVRSIVYSFDGK
TVSVVYRVTLHGIDAEIYREATGTASVDDTSYGDPIQKAEAMAFRRACARLGLGLHLYHE
DMS

Transcript Sequence

Transcript ID

Zm00001d012237_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:170724735:170730425:1 gene:Zm00001d012237 gene_biotype:protein_coding transcript_biotype:protein_coding description:SnRK1-interacting protein 1

Sequence

TTCAAAAACTGAACTAAACCCACCGAAAAACCCTCCGTTTCCCCGAGGGCTCAGTTCGCA
CGCTTCCCAACATGGCTCTCGGTGCCCTAGCCCGCCTCCTCCGCCTTGCGCCCACCCCTC
GCCTCGCGCGCCCCTTCGCTGCAAAGGTCCGTGCGTCTCGGCCGCAGGAACCGGAGCTTC
CGTCGGAGGACGACAACGACTTCGCCGGCGGCGAGCTCACCGCCCCCACCGAGGGCATCG
GCAAGCCGCTCGCCGAGGTGCTCAAAGAGCTCGGGAAGAGGGTTCCGGACTCCCTTGTCA
AGACCCGCGTCGAGAATAATGGCTTCGCTATCAAGTACATCCCATGGCACATTGTGAACA
AAATTCTCAACATACATGCTCCAGAGTGGTCGGGTGAGGTACGCAGCATTGTTTACTCAT
TTGACGGGAAAACAGTATCTGTTGTCTATCGAGTGACTCTTCATGGGATTGATGCAGAGA
TCTATAGAGAGGCTACTGGAACTGCTTCTGTTGATGATACAAGCTATGGTGATCCCATAC
AGAAGGCAGAAGCTATGGCTTTTCGTCGTGCTTGTGCACGTCTTGGTCTTGGACTCCATC
TCTACCATGAAGATATGTCATAGACTCGTAGTTGACTAATGTTAGTGTTTGTGGCGGACC
ATTGTCCCTTAATGGGCTACCCATTTGCACTGGGCATGCTTCTTTTTCTTAAATGTGGTA
TGTATGTGCAAGTGTTTGAAGTTTAGGCTGTCATGCTATATGTCAGCTATCAAAGTACCA
AATGCAACTACTGTTCTGAGCTGTTTGCTTGTTACGAAACAGCTTTCCAGTATCTAAATT
CCCGAGTTTCATGAAATCTTCATAGCTTTGTTT