Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012199_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:8:170004552:170010616:1 gene:Zm00001d012199 gene_biotype:protein_coding transcript_biotype:protein_coding description:CLP protease regulatory subunit CLPX3 mitochondrial
Sequence	ATGTTCCGGACCTTCACGAGGCTTCGGGATGCAGCGGCGCCGCTAGCCGCCTCGGCGGTA CGGCGGTGCTCAGGCGTCAGCGGCCGGATCCGGGCCGAGGCCAATTGCCCGCGCTGCGAC GCCCACATGTCGGTCCAATTCTCCCTCCAGCAGCTCCCGGCGCCCCCTCCGGCCTCCGCC GGGGCCATTGACGGCGCCCAGCACCACAACCACGACGGGGCGGGCGTGTGCCCGGCCTGC CGGGGCGCGTTCCTGTTCCGCGCCCAGCGGATCGACCCGCTGCGGGGCGCCTTCCTCGAG ATCCCTGCCGGCGTAGCGGCCGGCGACGAGGACGCGGAGAGCGGAGGGTTCGCCGATCGG ATCAAGAGGATGTTGTCGGAGCGCCCGCCGGACGAGTTCCCCCCGCTGCCGCAGTCGCCC CCGATGCAGATGCCGCACTATCCGATTCGACGGAAGCCGCGGAGGAGACCGAGGGAGGAA GGAGGAGGAGGAGGCGGCGGCGGCGGTGGCGGTAACGGCAACGGTAACGGCGGGGACTCG TCCTCGGGAGGGGACGGCACTAGCGCTTCGCCTAAGAGGGAGTGGTGGGGTGGAGCCAGC CTCGGCGATGACCTGCCGACCCCTCGGGAGTTGTGCCGGAGGCTTGATGAGTTCGTCATC GGCCAGGCCAAGGCAAAAAAGGTGCTATCTGTAGCTGTATACAACCATTACAAGAGAATA TATAATGCAAATGTACAGAAAGAATTTGCTGGTAATTCTGGGTTTCCTGATGCTGGACAT GATGATCAAAATATTGTAGAAATAGATAAAAGCAATGTACTCTTGATGGGCCCAACTGGC TCAGGAAAAACATTGCTTGCGAAAACATTAGCACGTATTGTAAATGTTCCATTCGTTATA GCTGATGCGACATCATTAACGCAGGCTGGCTATGTAGGGGAGGATGTAGAGTCGATACTT CAGAAATTGCTTGTGGCTGCTGAGTATAATGTTCAGGCTGCACAACAAGGGATAGTGTAC ATAGATGAAATAGATAAAATAACAAAGAAGGCAGAGAGTGCAAATGTTAGTAGAGATGTA TCTGGAGAAGGTGTTCAACAAGCATTGTTGAAAATCCTAGAAGGAACTGTTGTCAGTATT CCTGAGAAAGGATCACGCAAGAATTCTCGCAATGACAGTATACAGGTTACATGCTCTATA TGGTCTTTAATGAATACATGTGCCATATATCATATGGGTTAA

Peptide Sequence

PEP ID	Zm00001d012199_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:8:170004552:170010616:1 gene:Zm00001d012199 transcript:Zm00001d012199_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:CLP protease regulatory subunit CLPX3 mitochondrial
Sequence	MFRTFTRLRDAAAPLAASAVRRCSGVSGRIRAEANCPRCDAHMSVQFSLQQLPAPPPASA GAIDGAQHHNHDGAGVCPACRGAFLFRAQRIDPLRGAFLEIPAGVAAGDEDAESGGFADR IKRMLSERPPDEFPPLPQSPPMQMPHYPIRRKPRRRPREEGGGGGGGGGGGNGNGNGGDS SSGGDGTSASPKREWWGGASLGDDLPTPRELCRRLDEFVIGQAKAKKVLSVAVYNHYKRI YNANVQKEFAGNSGFPDAGHDDQNIVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVI ADATSLTQAGYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEIDKITKKAESANVSRDV SGEGVQQALLKILEGTVVSIPEKGSRKNSRNDSIQVTCSIWSLMNTCAIYHMG

Transcript Sequence

Transcript ID	Zm00001d012199_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:170004552:170010616:1 gene:Zm00001d012199 gene_biotype:protein_coding transcript_biotype:protein_coding description:CLP protease regulatory subunit CLPX3 mitochondrial
Sequence	ACTCCTCCTCCCTATCTCCACCATCCTCCACCTCCGCATCGTCGTCCTCCCCTCCGGGCT CCGGCTCCGCCCCCACCCACCCAGCCATGTTCCGGACCTTCACGAGGCTTCGGGATGCAG CGGCGCCGCTAGCCGCCTCGGCGGTACGGCGGTGCTCAGGCGTCAGCGGCCGGATCCGGG CCGAGGCCAATTGCCCGCGCTGCGACGCCCACATGTCGGTCCAATTCTCCCTCCAGCAGC TCCCGGCGCCCCCTCCGGCCTCCGCCGGGGCCATTGACGGCGCCCAGCACCACAACCACG ACGGGGCGGGCGTGTGCCCGGCCTGCCGGGGCGCGTTCCTGTTCCGCGCCCAGCGGATCG ACCCGCTGCGGGGCGCCTTCCTCGAGATCCCTGCCGGCGTAGCGGCCGGCGACGAGGACG CGGAGAGCGGAGGGTTCGCCGATCGGATCAAGAGGATGTTGTCGGAGCGCCCGCCGGACG AGTTCCCCCCGCTGCCGCAGTCGCCCCCGATGCAGATGCCGCACTATCCGATTCGACGGA AGCCGCGGAGGAGACCGAGGGAGGAAGGAGGAGGAGGAGGCGGCGGCGGCGGTGGCGGTA ACGGCAACGGTAACGGCGGGGACTCGTCCTCGGGAGGGGACGGCACTAGCGCTTCGCCTA AGAGGGAGTGGTGGGGTGGAGCCAGCCTCGGCGATGACCTGCCGACCCCTCGGGAGTTGT GCCGGAGGCTTGATGAGTTCGTCATCGGCCAGGCCAAGGCAAAAAAGGTGCTATCTGTAG CTGTATACAACCATTACAAGAGAATATATAATGCAAATGTACAGAAAGAATTTGCTGGTA ATTCTGGGTTTCCTGATGCTGGACATGATGATCAAAATATTGTAGAAATAGATAAAAGCA ATGTACTCTTGATGGGCCCAACTGGCTCAGGAAAAACATTGCTTGCGAAAACATTAGCAC GTATTGTAAATGTTCCATTCGTTATAGCTGATGCGACATCATTAACGCAGGCTGGCTATG TAGGGGAGGATGTAGAGTCGATACTTCAGAAATTGCTTGTGGCTGCTGAGTATAATGTTC AGGCTGCACAACAAGGGATAGTGTACATAGATGAAATAGATAAAATAACAAAGAAGGCAG AGAGTGCAAATGTTAGTAGAGATGTATCTGGAGAAGGTGTTCAACAAGCATTGTTGAAAA TCCTAGAAGGAACTGTTGTCAGTATTCCTGAGAAAGGATCACGCAAGAATTCTCGCAATG ACAGTATACAGGTTACATGCTCTATATGGTCTTTAATGAATACATGTGCCATATATCATA TGGGTTAAATTTGGATTCAATTGAATGAAAAAGGATCTTTAAAACGTTCTTTTTTACGTC ATAAGGACTCTGTACTACAGTACATAGTGAACAGAGGAAGTATTACCTCAAAAGCATTTC TTGACACCCAGATAACAGCAACACACGCTGGTTGTGTTAAAAATGTGCAAGGCATAAATA TTGTACTCCCTCCGTCTTAAAATATATAAGGGATCTAGAGTTCAAAAATTGTACCAAAAT ACAAGTATTCTGGAGCCTCCCTCCTTTGTCTTTTTAGCAGCAAATATTGAGATTCCTTTT TAACTTGGCATCACTCAAACAGACACTCAGTACTTAAGGAAAATAACAACTGAAGTACTC CCTCCATCCTAATTAGTGAAGGACAAGGTGGTCTTTTGCCAGGATTCTTATTTCGTCTGG AAATCGCTTGGATACCTTGTATTTAAGGATGGAGGGAGTATATGTTTGCCACTTTGTATT TGCTTATATATTATGGGCATCGTAAATCCATAGTGGTACTTCACTGTTTTCAGTGCGACA ATACAGAATCTTTTGAATCATGATACTGCAGATAGACACGACAGATATTCTTTTTATATG TGGTGGTGCTTTTGTGGACTTGGAAAAGACTATTTCTGAAAGGCGCCAAGATTCATCCAT AGGATTTGGGGCACCCATTCGTACGAACATGAGAAGTTCTGGAGCTAGCTGTCCAATGGT TACCTCATCTTTATTAGAATCTGTTGAAAGTGGTGATCTTGTAAGATATGGTCTAATTCC GGAGTTCATTGGTCGTTTGCCCATTCTAGTAAGTTTGGCAGCTCTGAATGAAGGTCAGCT CGTTCAGGTTCTGACAGAACCAAAGAATTCACTTTCCAAACAATACAGGAAAATGTTTAA CCTGAACAAAGTTAAGCTGCACTTTACTGATGGTGCACTTAGATTGTTAGCTAAGAAGGC GATAGCTAAAAGCACTGGTGCTCGTGGTTTAAGAGCCATCTTGGAAACTGTTCTTTTGGA GGCCATGTATGAGGTTCCAGACGAAAAAACAGGAAATGAGCGAGTTGACGCTGTTGTGGT GGATGAGGAGGCGATTGGTTCCGTTGATAGGCCAGGTTGTGGGGCTAAAATTCTCCGAGG GGATGGTGCATTGGACCAGTACATAACAAGAACCAATGTGATGAATTTACAGGAAACTAA CGATGGTTTGGCCGGGGAGCTCGAGGAAGCGTACATGCTGTCTAGAATTGTTAGCTTGTA ATTTGAAAGGCTGGGGAGGAAGCGTATATGCTGAGTTCTGACCAACTTCGTACATCGTGT AACATGTCTACCCCAACACAGGCCGGCTACTTTTTGCTCACAAAATCACCTGTACTCTGT CTCCATTCCTGTTAAGCTCTAACGAGCAGATAGATCCGGGGCACCTTTTCCATGTAAACA GGAGTTGCCTTTTGATTGAGCAACCGTCCTGCGGAGTAAATTGTTGCCCATTTTTCCCCG CTGCCCCCAACTGGGCAGCTCGATTGTGGTTGACAGAGTTGTAAAGATCATCAATTTACT GATATGATATGATAAGAAGGAGCACTTTC