Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012198_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:8:169939739:169944620:-1 gene:Zm00001d012198 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein root UVB sensitive 6
Sequence

ATGGCGCCAGCGGTGAGGCTCAAGCGCTCCTCCACCCAGACTATCACACTGCCGCCGCCC
GACGCGCGGCTGGCTGTGCGCGATGTCATGCGGTCCACGATCCCGTCGCGGCCCGCCGAG
GCTCCGGCGTCCACGGAGAGGCCGGCGCCCGCCGCGGCGCTGCAGGGGTTCCTGTGCCTG
GAGGAGGTGGACGGGAGGCGCTGGAGCTATGTGGTGGACGGCGGGTCCGCGAAGGGGAGG
GGCAGTGGCGGGGTCGCTGTCCCCGCTGGCGCCTCCGTCAGGGCCGTACCGCTGCAGTCG
CCGCTTCCGCCTGCCGAGGAAATAATGTCATTCATAAGATCATATGTTGTGCCTGAAGGG
TTTCCAGACAGTGTTACTCCTTCATATGTACCTTACATGAACTGGAGGGCTCTGAAGCAT
TTCTTTGGTGGTGCCATGGGGGTGTTTACGACAAGAACCTTGCTGAGTTCTGTTGGAGTC
TCTCAAAGCAAGGTAATACCAGGTGCCATTGCTATCAACTGGATCCTCAAGGATGGTGCT
GGGCGTGTTGGAAAAATGCTTTTTGCACGTCAAGGAAAGAAGTTTGACAATGACCTAAAG
CAGTTGCGGTTTTCTAGTGATCTCTTGTTGGAAATAGGAGCTGGGATAGAATTAACTACT
GCTGCATTCCCTCAGTTTTTCTTGCCTATGGCCTGTGTAGCCAATGTTGTAAAGAACGTC
GCTGCTGTTACATCAACTTCAACTCGCACTCCTATCTATAAGGCCTATGCTAGAGGAGAA
AACATTGGAGATGTCACTGCTAAAGGCGAATCTGTCGGGAACATTGCAGATCTGCTTGGT
ACTGGTTTGAGTATCTTTATCTCAAAAAGGAACCCGTCACTGGTGACTTCGTTTGCCTTC
CTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAGGTGAGATCTGTTGTGCTGAATACC
CTAAACAGAGCGAGGTTCACCGTCGCAGTAGATTCCTTCATTAAAACTGGTCACATTCCC
TCCTTGAAGGAAGGAAACTCACAGGAGACGATATTTAATCCACCTTGGCGGCACGAGACA
GTCGCCATAGGTTCAAGGTTTGGAGAAGCATTTCAAGAGCCAGCTTCATTTCTTGCCATA
AGACCCCTGTTTGAGGACGAGAGATACATGGTAACATATAACCCGACAAAGGATAAAGTG
TATGCTTTGCTCAAGGACCAAGCAAAATCAGATGACATTATCAAAGCTGCTTTTCATGCT
CATGTGCTACTGCATTTTATTAATGCATCACATGCACGGAGGCTGAAGCTGAAGCAGAAG
CAGGCAAACCCTGACCAATCAGAGCATCTGTACTCTAGAAACGTGGATTTCCTGGCGCAC
ATAGCTGAATCTTGCAAAATTGTTTCCTCATCGTACGGAACATTCAAGAAGAAAGCAAGG
GAACAGGGTTGGATAATGTCAGAATCTTTGCTCAACCCTGGCAAGGCTCGATTATGTGCA
GCAAAACCACAATGA

Peptide Sequence

PEP ID

Zm00001d012198_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:8:169939739:169944620:-1 gene:Zm00001d012198 transcript:Zm00001d012198_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein root UVB sensitive 6
Sequence

MAPAVRLKRSSTQTITLPPPDARLAVRDVMRSTIPSRPAEAPASTERPAPAAALQGFLCL
EEVDGRRWSYVVDGGSAKGRGSGGVAVPAGASVRAVPLQSPLPPAEEIMSFIRSYVVPEG
FPDSVTPSYVPYMNWRALKHFFGGAMGVFTTRTLLSSVGVSQSKVIPGAIAINWILKDGA
GRVGKMLFARQGKKFDNDLKQLRFSSDLLLEIGAGIELTTAAFPQFFLPMACVANVVKNV
AAVTSTSTRTPIYKAYARGENIGDVTAKGESVGNIADLLGTGLSIFISKRNPSLVTSFAF
LSCGYLLSSYQEVRSVVLNTLNRARFTVAVDSFIKTGHIPSLKEGNSQETIFNPPWRHET
VAIGSRFGEAFQEPASFLAIRPLFEDERYMVTYNPTKDKVYALLKDQAKSDDIIKAAFHA
HVLLHFINASHARRLKLKQKQANPDQSEHLYSRNVDFLAHIAESCKIVSSSYGTFKKKAR
EQGWIMSESLLNPGKARLCAAKPQ

Transcript Sequence

Transcript ID

Zm00001d012198_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:169939739:169944620:-1 gene:Zm00001d012198 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein root UVB sensitive 6
Sequence

ACTCTATATTATCTCTCTTTCGCCCACCTGATCAGGCGTCGCCGCCATCCACCGGACGCG
GCAGCCATGGCGCCAGCGGTGAGGCTCAAGCGCTCCTCCACCCAGACTATCACACTGCCG
CCGCCCGACGCGCGGCTGGCTGTGCGCGATGTCATGCGGTCCACGATCCCGTCGCGGCCC
GCCGAGGCTCCGGCGTCCACGGAGAGGCCGGCGCCCGCCGCGGCGCTGCAGGGGTTCCTG
TGCCTGGAGGAGGTGGACGGGAGGCGCTGGAGCTATGTGGTGGACGGCGGGTCCGCGAAG
GGGAGGGGCAGTGGCGGGGTCGCTGTCCCCGCTGGCGCCTCCGTCAGGGCCGTACCGCTG
CAGTCGCCGCTTCCGCCTGCCGAGGAAATAATGTCATTCATAAGATCATATGTTGTGCCT
GAAGGGTTTCCAGACAGTGTTACTCCTTCATATGTACCTTACATGAACTGGAGGGCTCTG
AAGCATTTCTTTGGTGGTGCCATGGGGGTGTTTACGACAAGAACCTTGCTGAGTTCTGTT
GGAGTCTCTCAAAGCAAGGTAATACCAGGTGCCATTGCTATCAACTGGATCCTCAAGGAT
GGTGCTGGGCGTGTTGGAAAAATGCTTTTTGCACGTCAAGGAAAGAAGTTTGACAATGAC
CTAAAGCAGTTGCGGTTTTCTAGTGATCTCTTGTTGGAAATAGGAGCTGGGATAGAATTA
ACTACTGCTGCATTCCCTCAGTTTTTCTTGCCTATGGCCTGTGTAGCCAATGTTGTAAAG
AACGTCGCTGCTGTTACATCAACTTCAACTCGCACTCCTATCTATAAGGCCTATGCTAGA
GGAGAAAACATTGGAGATGTCACTGCTAAAGGCGAATCTGTCGGGAACATTGCAGATCTG
CTTGGTACTGGTTTGAGTATCTTTATCTCAAAAAGGAACCCGTCACTGGTGACTTCGTTT
GCCTTCCTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAGGTGAGATCTGTTGTGCTG
AATACCCTAAACAGAGCGAGGTTCACCGTCGCAGTAGATTCCTTCATTAAAACTGGTCAC
ATTCCCTCCTTGAAGGAAGGAAACTCACAGGAGACGATATTTAATCCACCTTGGCGGCAC
GAGACAGTCGCCATAGGTTCAAGGTTTGGAGAAGCATTTCAAGAGCCAGCTTCATTTCTT
GCCATAAGACCCCTGTTTGAGGACGAGAGATACATGGTAACATATAACCCGACAAAGGAT
AAAGTGTATGCTTTGCTCAAGGACCAAGCAAAATCAGATGACATTATCAAAGCTGCTTTT
CATGCTCATGTGCTACTGCATTTTATTAATGCATCACATGCACGGAGGCTGAAGCTGAAG
CAGAAGCAGGCAAACCCTGACCAATCAGAGCATCTGTACTCTAGAAACGTGGATTTCCTG
GCGCACATAGCTGAATCTTGCAAAATTGTTTCCTCATCGTACGGAACATTCAAGAAGAAA
GCAAGGGAACAGGGTTGGATAATGTCAGAATCTTTGCTCAACCCTGGCAAGGCTCGATTA
TGTGCAGCAAAACCACAATGAATCTACTGTTTCAGTTCAGTGTCGATGAGATGATACCAA
TCTCATGTTTGTAAAGACTAACTTTTCTAACCAGACAGGATGCTCAGTTCTTAGGAGCTG
AACTAACATATGTTGGTTCCCAGCAATAGGCGTGAATCTGAAACTACCAAATTCTAG