Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012195_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:8:169913707:169917855:1 gene:Zm00001d012195 gene_biotype:protein_coding transcript_biotype:protein_coding description:protein serine/threonine kinases;ATP binding;catalytics
Sequence

ATGAAGCTTGACGTGAATGCCCTTCGCTACCTCGCCAAGGACGACTTCCGCGTCCTTACC
GCCGTCGAGATGGGCATGCGCAACCACGAGATTGTTCCAGCAGAACTTGTCGACAGGATC
GCCAGACTGAAGCATGGAGGCACATACAAAGTGCTGAGGAATCTTTTGAAGAACAAGCTA
GTGCATCATGATGCCACTAAATACGATGGGTATAGACTCACCTATCTAGGATATGACTTC
CTTGCCATCAAGACTTTGGTTAATCGGGGAGTTTTTGCTTCAGTTGGCCGTCAGATCGGT
GTTGGAAAGGAGTCTGATATATTTGAGGTTGCCACAGAGGATGGTACAGTACTCGCCATG
AAACTTCATAGGCTGGGAAGGACATCTTTTAGGGCTGTGAAATCTAAACGTGACTATCTA
AGGCACAGAAGGAGCTTTAATTGGCTGTACCTCTCACGACTTGCAGCCTTGAAAGAATTT
GCCTTTATGAAGGCTTTAGGGGACCATGGTTTCCCTGTTCCAGCTGCTGTAGATTGCAAT
CGCCATTGTGTGATCATGTCACTTGTGCAGGGATATCCTCTTGTTCAAGTGAAAGAGTTA
CAAAATCCAGATGACGTTTTTGACACAATTCTTGGTCTTATTGTTCGTTTGGCAGAGCAT
GGACTGATACATTGTGACTTTAATGAGTTCAATATCATGATTGATGATGATGAAAAAATT
ACGGTTATTGATTTTCCACAGATGGTATCTGTTTCTCATCGTAATGCCCAAATGTTTTTT
GACCGAGACATTGAATGTATCTACAAGTTCTTTAACAAAAGGTTCAATCTGACATCAGAG
AAAAATGAAGAACAAGCTGGGTCTGAAAGTGATGATGAAGGGAATAGCAGACCTTCCTTT
TTGTCTGTGAAAAAGACTGCTGGTTCCTTGGACAAGGAACTAGCTGCAAGTGGATATACC
AGGAAAGAGCAAGTGGAGATGGACAAGTACATTGAGGAAGATGCTGAAAGACATGATTCC
AGCTCAGATGATGATGACGACGACGGACGATTCTGCTGA

Peptide Sequence

PEP ID

Zm00001d012195_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:8:169913707:169917855:1 gene:Zm00001d012195 transcript:Zm00001d012195_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:protein serine/threonine kinases;ATP binding;catalytics
Sequence

MKLDVNALRYLAKDDFRVLTAVEMGMRNHEIVPAELVDRIARLKHGGTYKVLRNLLKNKL
VHHDATKYDGYRLTYLGYDFLAIKTLVNRGVFASVGRQIGVGKESDIFEVATEDGTVLAM
KLHRLGRTSFRAVKSKRDYLRHRRSFNWLYLSRLAALKEFAFMKALGDHGFPVPAAVDCN
RHCVIMSLVQGYPLVQVKELQNPDDVFDTILGLIVRLAEHGLIHCDFNEFNIMIDDDEKI
TVIDFPQMVSVSHRNAQMFFDRDIECIYKFFNKRFNLTSEKNEEQAGSESDDEGNSRPSF
LSVKKTAGSLDKELAASGYTRKEQVEMDKYIEEDAERHDSSSDDDDDDGRFC

Transcript Sequence

Transcript ID

Zm00001d012195_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:169913707:169917855:1 gene:Zm00001d012195 gene_biotype:protein_coding transcript_biotype:protein_coding description:protein serine/threonine kinases;ATP binding;catalytics
Sequence

CATCGTGCGGTGGTCTGCCTTGGCTGCAGCCAGCAGCAGAAGGAGGACACCATGAAGCTT
GACGTGAATGCCCTTCGCTACCTCGCCAAGGACGACTTCCGCGTCCTTACCGCCGTCGAG
ATGGGCATGCGCAACCACGAGATTGTTCCAGCAGAACTTGTCGACAGGATCGCCAGACTG
AAGCATGGAGGCACATACAAAGTGCTGAGGAATCTTTTGAAGAACAAGCTAGTGCATCAT
GATGCCACTAAATACGATGGGTATAGACTCACCTATCTAGGATATGACTTCCTTGCCATC
AAGACTTTGGTTAATCGGGGAGTTTTTGCTTCAGTTGGCCGTCAGATCGGTGTTGGAAAG
GAGTCTGATATATTTGAGGTTGCCACAGAGGATGGTACAGTACTCGCCATGAAACTTCAT
AGGCTGGGAAGGACATCTTTTAGGGCTGTGAAATCTAAACGTGACTATCTAAGGCACAGA
AGGAGCTTTAATTGGCTGTACCTCTCACGACTTGCAGCCTTGAAAGAATTTGCCTTTATG
AAGGCTTTAGGGGACCATGGTTTCCCTGTTCCAGCTGCTGTAGATTGCAATCGCCATTGT
GTGATCATGTCACTTGTGCAGGGATATCCTCTTGTTCAAGTGAAAGAGTTACAAAATCCA
GATGACGTTTTTGACACAATTCTTGGTCTTATTGTTCGTTTGGCAGAGCATGGACTGATA
CATTGTGACTTTAATGAGTTCAATATCATGATTGATGATGATGAAAAAATTACGGTTATT
GATTTTCCACAGATGGTATCTGTTTCTCATCGTAATGCCCAAATGTTTTTTGACCGAGAC
ATTGAATGTATCTACAAGTTCTTTAACAAAAGGTTCAATCTGACATCAGAGAAAAATGAA
GAACAAGCTGGGTCTGAAAGTGATGATGAAGGGAATAGCAGACCTTCCTTTTTGTCTGTG
AAAAAGACTGCTGGTTCCTTGGACAAGGAACTAGCTGCAAGTGGATATACCAGGAAAGAG
CAAGTGGAGATGGACAAGTACATTGAGGAAGATGCTGAAAGACATGATTCCAGCTCAGAT
GATGATGACGACGACGGACGATTCTGCTGAGCCTGATTGTAATCTTGCCTCAAGGGATTC
AGATGTGCCTGGAACTTTTTCTGAAGAGAATGAAACAAGCTGTAGCAGTGAGAAGAGATT
GGAAAGTCCCTCGGGTGACAATGGAGAGGCTATGAAACCGCTTGAATCTGAGGGCAAGAC
GCTTTCCCAGAAAGACGACAACAATGATGATGACTCATCAGAGGATGCTGATGAAGAAGA
AGAAGATGCCGAGCTCACGAAACAATTGAACAAGCAAAGGAAAAAGGCAATAGCAGCTGC
CAGTGGTCGGAGAAGGCCAGTGTCGTCCAGGAACGCCTGCAAGGACAAGGGTAAGGGCAC
CATGAACTCCAAAATCCAGAGGCAGGCGTGCCAGTGGTGATGGTCACTCGAATGTCTGCA
GTGCCTCTTTCGACAATCGTAAAGTAGACCAAGAGTAGGATTTTCCATGAGGGTAGAACC
GAGGGATCCCTGTACTAGAATCAACTCTGGTTTTATTCTTTTA