Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012166_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:8:169364121:169370270:-1 gene:Zm00001d012166 gene_biotype:protein_coding transcript_biotype:protein_coding description:Faciata 1-like protein
Sequence	ATGAAAAGCGGCGTCATGGTTCTCGGTGTCGGCAGCCCTGAAGAGGCCCCTGACCGCAAC GATGCGGAGCCACGGCGCGATATGGGCCAATCGCAGATGCAGGTCGGTGGCCCCGTTGTT CTCAACCGATCAGCTGAGCTCGGGTCAGGTGATTTTATGGCTATCGATGACGCTCCAGTT CAAGCACCATCGGGCCAGCCGGCGGCGGCAAAACATCAGTCTCCTGCTGCTCTGACGGAC ACCATCATGGAGGTGCAGAAGCAACTGAAGCGAAAGAGGGCTTCTAATAACCCAGTGATT GCTGCCGCGGACAAGGACGCTCTCGCTGCCGGGTGCCGGCAAGAGCTTGAGGGTCTCTTC CAGTTTTACAAGGAGGTTTCTGACCGTAAGGTGCAGCTTGACGGTGGTAACCTGTCCGTC AACGGAATGGTTGGCTGCTTGCTTGAGGAGAGCAGCCTTGGGCTGACCAAGTTGGTGGAC GGGATATATGAAAAGTTGAAGGGATTGGATGGTGTGTCTGTGGCTTCAGTCCGTGGCTCT GTGCTGCTCGTTGGGCAGAGGATGATGTACGGGAAATCATCCTTGGACGCTGATGTGTTG GAAGATGATACAGAGTCGGCTCTTTGGTGCTGGGAGACAAGAGATCTGAAATTGATGCCT GTGAAAGCACGCAGTGTTCTTAGTACACGGAGGTCTGTCAGAAAGAAAATCCATGAGAGA ATCACTGCCATCTATTCAACTCTATCGGTTCTTGAAAACCCAGGAGTTTACGTCCAAGTA AATGATCTAAAAAAGGCATCATTAAGATTAAACAAATCGCTGAACCTGGAAGGGATCAGA TCAATGGTGGAAAGAGTGGCACAAAAGAACCTAGAACGGGGTGTGAAAGTTGCTGGATCA GCAATTAAGGAATTGAAGCAAGAGACAGAAAAAAATGACCAAAATCTTAGAAGACTTGAG GATACTAGCGTCTCTGAGCTGCAGAATGGAAATTCGCCTGATAATGAAAAAGAGGTTCAA AAGGCACAAAAACAGGTGGAGAAGGAAATAAAGCGCCAGGAGAAAGAAGAAGCTCGGATG AAAAAACTGCAAAAGAAACAGCAAGAAGATGTCCTAAGAGAACAGAAGAGACGTGAAAAG GAGGAAGCTGAAGCTAAGAAACAACAAAAGAAGCAGGAGGAGGAAGCACTGAAAGAACAG AAGCGTCGTGAAAAGGAAGAAGCTGAAATGAAGAAACAACATAAAAAACAGCAAGAGGAA GCTGAGAAAGAACAGAAGCGCCTTGAGAAGGAAGCTGCACAACTCAAGAAGCAACTAGCC GTGCAAAAGCAAGCTTCTATGATGCAAAGATTTTTCAAAAGTAAGAAAGACAATGGAAAA CTTCAAAAATCTGGAGAGAACAACTCAGCTGATGGTCCGTGCAATGACAACAAAGAGACC GTACCATCAACCACATCAAAAATTGATTATTCATTGTCTCAACAAGAGAGCTGGGTTTTG GAGGATCTTTGGAGGTTGCAGATCACTGGTTGGAAGAAGCTATCTAGCCACAATAGGTCC TCCAGATGGGGTGTAAGATGCAAACCCAAGACGAAAGCATTTAATGAACTGAAGCTTCAG AAATCCTCAGATGATATGGTTGATGAAATACTTTCTACTCCAAATAAAGATGGCTGCCAC ACTTCAAGTCAGGAAAATGAACATGCTACGCTTGAAAGTGACATTGACATGCTACAAGCT ATTGAGGTGCAATGTCATGACACCAATAACCCTAAACCTCTGCAAACTAGATTAATTAGA AGGAAACTTCTGCAATTTGACAAAAGTAACAGGCCAGCGTATTATGGATCCTGGAGGAAG AAAAGTGTTGTTATTGGTCCAAGGTGTCCACTTAAGATGGATCCTAATCTTGACTATGAG GTTGATAGTGATGATGAATGGGAAGAGGAGGATCCTGGTGAGAGTCTTTCTGACTGTGAG AAGGATAATGATGAATTTATGGAAGAAGATTCCAAAATTACAGATGAAGAAGATGAAGAT AGCTTTGTTGTGCCTGATGGCTATCTATCGGACAATGAGGGAATACAAATTGAAAGCCTA TTGGATGATAAAGATGAGGAAGCCAGTAGCTCACCAACTGGTCAGTGTGCAGAAGTTGAA GAGTTCAGGTCTCTACTGCGCCAACAAAGAGTCCTGAACATTTTAACCGAGCAAGCTCTC CGGAAGAGCCAACCTCTTATTATATCCAACCTAAATCATGAAAAAGCTGAATTACTGACT GCCGAAGACCTCAAGGGGACAGCAAAGATCGAACAGCTATGTTTGCAAGTTCTTTCAATG CACATCTGTCCAGGAGGCGCAGTTGTTGATGTGCCTCTAACTGACAGCTCATCTGCAACT GTTGAAGAAATTAACCAGCCCAATCCGAAGGATGGTTCTCCTGGGGCTGCATCTGCTATA CCAGAAACAGATCTGCCAGAAATTGTCCAGGTGATAAGATCATGTCGAGATGGTATCCAT AAGGTGGTGGAATTACTGCAGCACAAGTTTCCAAATGTTTCAAAGACTCAGCTGAATCGC AAAGTGAGAGAGATATCTGACTTTGTTGACAATCATTGGAAGGTAAAGAAAGAGGTGCTT GACAAGCTGGGATTGGATTCGTCACCAGTGAAATCCAAGAAGAATAAAAGCATAGCCATG TACTTCTCGAAGAGATGTTTACCTCCTGAAGAGGCTGTCAATGCTCTGTCTGCTTCTCCT GAGTTGCGGTTGAAATCTAGAACCATTCAAAATGGCAATGGTGGCACCGAAGCTCCTCAG ATCAATCTGTTCCCTTCAAAGCAGTAG

Peptide Sequence

PEP ID	Zm00001d012166_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:8:169364121:169370270:-1 gene:Zm00001d012166 transcript:Zm00001d012166_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Faciata 1-like protein
Sequence	MKSGVMVLGVGSPEEAPDRNDAEPRRDMGQSQMQVGGPVVLNRSAELGSGDFMAIDDAPV QAPSGQPAAAKHQSPAALTDTIMEVQKQLKRKRASNNPVIAAADKDALAAGCRQELEGLF QFYKEVSDRKVQLDGGNLSVNGMVGCLLEESSLGLTKLVDGIYEKLKGLDGVSVASVRGS VLLVGQRMMYGKSSLDADVLEDDTESALWCWETRDLKLMPVKARSVLSTRRSVRKKIHER ITAIYSTLSVLENPGVYVQVNDLKKASLRLNKSLNLEGIRSMVERVAQKNLERGVKVAGS AIKELKQETEKNDQNLRRLEDTSVSELQNGNSPDNEKEVQKAQKQVEKEIKRQEKEEARM KKLQKKQQEDVLREQKRREKEEAEAKKQQKKQEEEALKEQKRREKEEAEMKKQHKKQQEE AEKEQKRLEKEAAQLKKQLAVQKQASMMQRFFKSKKDNGKLQKSGENNSADGPCNDNKET VPSTTSKIDYSLSQQESWVLEDLWRLQITGWKKLSSHNRSSRWGVRCKPKTKAFNELKLQ KSSDDMVDEILSTPNKDGCHTSSQENEHATLESDIDMLQAIEVQCHDTNNPKPLQTRLIR RKLLQFDKSNRPAYYGSWRKKSVVIGPRCPLKMDPNLDYEVDSDDEWEEEDPGESLSDCE KDNDEFMEEDSKITDEEDEDSFVVPDGYLSDNEGIQIESLLDDKDEEASSSPTGQCAEVE EFRSLLRQQRVLNILTEQALRKSQPLIISNLNHEKAELLTAEDLKGTAKIEQLCLQVLSM HICPGGAVVDVPLTDSSSATVEEINQPNPKDGSPGAASAIPETDLPEIVQVIRSCRDGIH KVVELLQHKFPNVSKTQLNRKVREISDFVDNHWKVKKEVLDKLGLDSSPVKSKKNKSIAM YFSKRCLPPEEAVNALSASPELRLKSRTIQNGNGGTEAPQINLFPSKQ

Transcript Sequence

Transcript ID	Zm00001d012166_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:169364121:169370270:-1 gene:Zm00001d012166 gene_biotype:protein_coding transcript_biotype:protein_coding description:Faciata 1-like protein
Sequence	CTCTCTTCCAAATCTCTAGTCTTCTCCAGTTCCCACCCCGCGCCCCAAATCCAGATCCAC TGCCCACCACCCGCCTATTAGTCTCCAACGCGGACGCCCCCGCCCCCGGCTGCACTCGTC GCGCCATCCTCTGGTGCCTGGTCTCCGGGATTCTGCAGGTTCGGCTCCGAACTTGGGCAG AAATGGGCTCTCGTGCAGTTTATCTCTTGCAGAAATGAACTTGCTTCATCTCTATTGCAG TTTATTTCTTTTCTCATAACTCCTAGTTTCTATGACGTGCAAAATCCTAGCGCACCAGTG TGTCTATAACGCCATGTCTGAATGCATCCGCTTTTCGTTATCCTGGTTCAGGTTCAGTTG AGTAGACCAGTGTTTGAGCAAGGGTTGAACATAGGAATGCGCTGTTTGTTCCTAGAGTAG CAGTTCAAAATCCAAACCCGCCCGCGATGAAAAGCGGCGTCATGGTTCTCGGTGTCGGCA GCCCTGAAGAGGCCCCTGACCGCAACGATGCGGAGCCACGGCGCGATATGGGCCAATCGC AGATGCAGGTCGGTGGCCCCGTTGTTCTCAACCGATCAGCTGAGCTCGGGTCAGGTGATT TTATGGCTATCGATGACGCTCCAGTTCAAGCACCATCGGGCCAGCCGGCGGCGGCAAAAC ATCAGTCTCCTGCTGCTCTGACGGACACCATCATGGAGGTGCAGAAGCAACTGAAGCGAA AGAGGGCTTCTAATAACCCAGTGATTGCTGCCGCGGACAAGGACGCTCTCGCTGCCGGGT GCCGGCAAGAGCTTGAGGGTCTCTTCCAGTTTTACAAGGAGGTTTCTGACCGTAAGGTGC AGCTTGACGGTGGTAACCTGTCCGTCAACGGAATGGTTGGCTGCTTGCTTGAGGAGAGCA GCCTTGGGCTGACCAAGTTGGTGGACGGGATATATGAAAAGTTGAAGGGATTGGATGGTG TGTCTGTGGCTTCAGTCCGTGGCTCTGTGCTGCTCGTTGGGCAGAGGATGATGTACGGGA AATCATCCTTGGACGCTGATGTGTTGGAAGATGATACAGAGTCGGCTCTTTGGTGCTGGG AGACAAGAGATCTGAAATTGATGCCTGTGAAAGCACGCAGTGTTCTTAGTACACGGAGGT CTGTCAGAAAGAAAATCCATGAGAGAATCACTGCCATCTATTCAACTCTATCGGTTCTTG AAAACCCAGGAGTTTACGTCCAAGTAAATGATCTAAAAAAGGCATCATTAAGATTAAACA AATCGCTGAACCTGGAAGGGATCAGATCAATGGTGGAAAGAGTGGCACAAAAGAACCTAG AACGGGGTGTGAAAGTTGCTGGATCAGCAATTAAGGAATTGAAGCAAGAGACAGAAAAAA ATGACCAAAATCTTAGAAGACTTGAGGATACTAGCGTCTCTGAGCTGCAGAATGGAAATT CGCCTGATAATGAAAAAGAGGTTCAAAAGGCACAAAAACAGGTGGAGAAGGAAATAAAGC GCCAGGAGAAAGAAGAAGCTCGGATGAAAAAACTGCAAAAGAAACAGCAAGAAGATGTCC TAAGAGAACAGAAGAGACGTGAAAAGGAGGAAGCTGAAGCTAAGAAACAACAAAAGAAGC AGGAGGAGGAAGCACTGAAAGAACAGAAGCGTCGTGAAAAGGAAGAAGCTGAAATGAAGA AACAACATAAAAAACAGCAAGAGGAAGCTGAGAAAGAACAGAAGCGCCTTGAGAAGGAAG CTGCACAACTCAAGAAGCAACTAGCCGTGCAAAAGCAAGCTTCTATGATGCAAAGATTTT TCAAAAGTAAGAAAGACAATGGAAAACTTCAAAAATCTGGAGAGAACAACTCAGCTGATG GTCCGTGCAATGACAACAAAGAGACCGTACCATCAACCACATCAAAAATTGATTATTCAT TGTCTCAACAAGAGAGCTGGGTTTTGGAGGATCTTTGGAGGTTGCAGATCACTGGTTGGA AGAAGCTATCTAGCCACAATAGGTCCTCCAGATGGGGTGTAAGATGCAAACCCAAGACGA AAGCATTTAATGAACTGAAGCTTCAGAAATCCTCAGATGATATGGTTGATGAAATACTTT CTACTCCAAATAAAGATGGCTGCCACACTTCAAGTCAGGAAAATGAACATGCTACGCTTG AAAGTGACATTGACATGCTACAAGCTATTGAGGTGCAATGTCATGACACCAATAACCCTA AACCTCTGCAAACTAGATTAATTAGAAGGAAACTTCTGCAATTTGACAAAAGTAACAGGC CAGCGTATTATGGATCCTGGAGGAAGAAAAGTGTTGTTATTGGTCCAAGGTGTCCACTTA AGATGGATCCTAATCTTGACTATGAGGTTGATAGTGATGATGAATGGGAAGAGGAGGATC CTGGTGAGAGTCTTTCTGACTGTGAGAAGGATAATGATGAATTTATGGAAGAAGATTCCA AAATTACAGATGAAGAAGATGAAGATAGCTTTGTTGTGCCTGATGGCTATCTATCGGACA ATGAGGGAATACAAATTGAAAGCCTATTGGATGATAAAGATGAGGAAGCCAGTAGCTCAC CAACTGGTCAGTGTGCAGAAGTTGAAGAGTTCAGGTCTCTACTGCGCCAACAAAGAGTCC TGAACATTTTAACCGAGCAAGCTCTCCGGAAGAGCCAACCTCTTATTATATCCAACCTAA ATCATGAAAAAGCTGAATTACTGACTGCCGAAGACCTCAAGGGGACAGCAAAGATCGAAC AGCTATGTTTGCAAGTTCTTTCAATGCACATCTGTCCAGGAGGCGCAGTTGTTGATGTGC CTCTAACTGACAGCTCATCTGCAACTGTTGAAGAAATTAACCAGCCCAATCCGAAGGATG GTTCTCCTGGGGCTGCATCTGCTATACCAGAAACAGATCTGCCAGAAATTGTCCAGGTGA TAAGATCATGTCGAGATGGTATCCATAAGGTGGTGGAATTACTGCAGCACAAGTTTCCAA ATGTTTCAAAGACTCAGCTGAATCGCAAAGTGAGAGAGATATCTGACTTTGTTGACAATC ATTGGAAGGTAAAGAAAGAGGTGCTTGACAAGCTGGGATTGGATTCGTCACCAGTGAAAT CCAAGAAGAATAAAAGCATAGCCATGTACTTCTCGAAGAGATGTTTACCTCCTGAAGAGG CTGTCAATGCTCTGTCTGCTTCTCCTGAGTTGCGGTTGAAATCTAGAACCATTCAAAATG GCAATGGTGGCACCGAAGCTCCTCAGATCAATCTGTTCCCTTCAAAGCAGTAGAGTTTGT AACAGGACACCCTGAAAGTCGGATCAGGTATAAATGAGGCTATGCACCCAGGTGAGCACA AAGCTCAGAGGTCCATGTCCCTCCCATGGCTATGGAAGTGCGTGCAACTTGGTTTTGCAT ATGGATGATCTGGATCGATTATGTTTCCAGTGACATGTTGTAATTTTAGCCAGAAAGTAG GTTTGTTCATGAAGGACATTCAGTTCAAATGTTTGACCTATTGTTAAGGCAAGGCATTGT TCTCTGCAACATGTGGTGTTATGAACATTATGTGCACTCGTGATTCT