Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012141_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:168732016:168736038:1 gene:Zm00001d012141 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plastid transcriptionally active chromosome 10 homolog description:Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10
Sequence	ATGGCGGCCTCCCCAGCGGCCGCCGCTACCTTCCTTCACCATCACCTCCCCTTTCCCAGT CGCCCCAAGACACTTCTCAGACCACGCCTCCACCGCCTCGCCGCGTCCATCAACCCCTCG TCCACCGACGAGACCCCCGCCGCGGACCCACCGGTCATCCCCTCGATCAGCATCAAGAAC ACTGAGCCCGAGGAGGTCGCCCGCCGCCGCAGTTGGGTGGAGCACGGATGGGCTCCGTGG GAGGAAATCATGACGCCGGAGGTCGCCTTTGCGCGCCACAGCCTCAACGAGGGCGAGGAG GTGCCGCTTCAGTCGCCGGAGTCCCTCGAGGCTTTCCGGATGCTCACGCCTTCCTACCGG AAGAAGGTGGAGGCTGAGCCAGGATACCTGGAGCGCCTCTTCGCGACGCGCGACACGCCC GAGCCTCTCGAGACGACGTGGGCCGGCCGGCTCCCGCTGCGGCTCGTGCCGCCGCGGGAC TGGCCGCCGCCTGGCTGGGAGGTGGACCCGGACGAGCTGGAGTTCATAAGGGAGGCGCAC AGGGCGGCCTCTGAGAGGCTGGACATGGAGGCGGCGGCTGCGGCAGGGGTGACCAACGTG GAGAAGCTGGAGGATGCGCCACAGGATCTGGCGCTAGAGAGGTACAAAATGTTCCTGAAG CAGTACAAGGAATGGGTGGAGGCAAACCGAGATAGGTTGGAGCAGGAGTCCTACCAGTTT GATCAGGATTACTTCCCTGGCAGACGAAAAAGAGGTAAGGACTACAGTGAGGATATGCGT GAACTTCCATTCTACTATCCCGGACAGATATGTTACGGGCAAGTAACGACTGTTCACCTC TACCAGGGAGCCTTTGTGAACATTGGTTGTGTCCATGAGGGGTGGGTACCGATAAAAGGA AATGACTGGTACTGGATCCGACATCACATCAAGCCTGGCATGAAAGTCTACGTGGAGATT CTGGCCAAACGAGACCCTTACCGCTTCCGCTTCCCACTTGAGATGCGATTTGTATATCCT AACATTGATCACCTAATATTTAATAGATTCGACTTCCCACCAATATTTCACCGTAAGGAG GATACTAACCTAGAGCAGTTGTGGCGTGAAGCCGGACGGCCACCCATTCCTAGGAAAAAA CCTTTAAAAGATATGGAAAAGGAACCTTTGGTATCAGACCATCCTTTTGTTGACACGCTT TGGGAATGGCATAATGCAGAGCAGATGATTTTAGACTACGAGGAACAAAATCCAGATAAA TTCAAGAATACAACATATGAGTCCACAGTTGATGCACCCTCAATCGATGAAGAAAAAAGA GTTGAATACACCGAAGGATATTTCAAAGAAACACTGCTAAAAAAGAAAGTTGTGAATATT AGCATCAAAGAACTTGATCTGGATGCTGCCCGTGCTGAACGCCAGCTGATAAAAAGGCTG AAAAAGGAAGCCGAGGAGAGAGGGGAGGAATACAAGGTTAGGAAGCTCCGACGAAACAAA GAAATGGATGAGTATGATCTGATGCAATGGCGTCGTTCATTTGAAGAGAGGGAAGCGCTT ATCAGAGACATCTGCTGCCGGAAAGCGCTTGATCTTCCTATCGAAGAGCCCGGGCGATAC GACGTGGACGAGACAGAGGTGTACGGGAAGGATTACTATGACCCAGAGAAGCCAATGTAC CGGTACGACTACTGGGGCGAGCCCAAGAACACGGAGAAGACGAAGCTGGAGCGGGACGTG GAGCGCCACAACCAGCAGGTGGTCGGCGACGCGAAGAAGTGGTGCGAGATGTCGTACGAC GACTACGTCCGCAAGAAGCTGCGGTTGGAAGCGGCTGAGGCGAGGGAAAGGCGGAGGAAG GCGGCCGAGGCGCAAGAGGACGAGCAGGAGTACGATGACGGCATGGACCTGGACCTGAAG AAGATGACCGATCCACGCGCCCCGCACAACCGGTTTTACATCACGAAATGA

Peptide Sequence

PEP ID	Zm00001d012141_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:168732016:168736038:1 gene:Zm00001d012141 transcript:Zm00001d012141_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plastid transcriptionally active chromosome 10 homolog description:Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10
Sequence	MAASPAAAATFLHHHLPFPSRPKTLLRPRLHRLAASINPSSTDETPAADPPVIPSISIKN TEPEEVARRRSWVEHGWAPWEEIMTPEVAFARHSLNEGEEVPLQSPESLEAFRMLTPSYR KKVEAEPGYLERLFATRDTPEPLETTWAGRLPLRLVPPRDWPPPGWEVDPDELEFIREAH RAASERLDMEAAAAAGVTNVEKLEDAPQDLALERYKMFLKQYKEWVEANRDRLEQESYQF DQDYFPGRRKRGKDYSEDMRELPFYYPGQICYGQVTTVHLYQGAFVNIGCVHEGWVPIKG NDWYWIRHHIKPGMKVYVEILAKRDPYRFRFPLEMRFVYPNIDHLIFNRFDFPPIFHRKE DTNLEQLWREAGRPPIPRKKPLKDMEKEPLVSDHPFVDTLWEWHNAEQMILDYEEQNPDK FKNTTYESTVDAPSIDEEKRVEYTEGYFKETLLKKKVVNISIKELDLDAARAERQLIKRL KKEAEERGEEYKVRKLRRNKEMDEYDLMQWRRSFEEREALIRDICCRKALDLPIEEPGRY DVDETEVYGKDYYDPEKPMYRYDYWGEPKNTEKTKLERDVERHNQQVVGDAKKWCEMSYD DYVRKKLRLEAAEARERRRKAAEAQEDEQEYDDGMDLDLKKMTDPRAPHNRFYITK

Transcript Sequence

Transcript ID	Zm00001d012141_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:168732016:168736038:1 gene:Zm00001d012141 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plastid transcriptionally active chromosome 10 homolog description:Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10
Sequence	ACCAGTCCGTGCTCCCAAAATGGCGGCCTCCCCAGCGGCCGCCGCTACCTTCCTTCACCA TCACCTCCCCTTTCCCAGTCGCCCCAAGACACTTCTCAGACCACGCCTCCACCGCCTCGC CGCGTCCATCAACCCCTCGTCCACCGACGAGACCCCCGCCGCGGACCCACCGGTCATCCC CTCGATCAGCATCAAGAACACTGAGCCCGAGGAGGTCGCCCGCCGCCGCAGTTGGGTGGA GCACGGATGGGCTCCGTGGGAGGAAATCATGACGCCGGAGGTCGCCTTTGCGCGCCACAG CCTCAACGAGGGCGAGGAGGTGCCGCTTCAGTCGCCGGAGTCCCTCGAGGCTTTCCGGAT GCTCACGCCTTCCTACCGGAAGAAGGTGGAGGCTGAGCCAGGATACCTGGAGCGCCTCTT CGCGACGCGCGACACGCCCGAGCCTCTCGAGACGACGTGGGCCGGCCGGCTCCCGCTGCG GCTCGTGCCGCCGCGGGACTGGCCGCCGCCTGGCTGGGAGGTGGACCCGGACGAGCTGGA GTTCATAAGGGAGGCGCACAGGGCGGCCTCTGAGAGGCTGGACATGGAGGCGGCGGCTGC GGCAGGGGTGACCAACGTGGAGAAGCTGGAGGATGCGCCACAGGATCTGGCGCTAGAGAG GTACAAAATGTTCCTGAAGCAGTACAAGGAATGGGTGGAGGCAAACCGAGATAGGTTGGA GCAGGAGTCCTACCAGTTTGATCAGGATTACTTCCCTGGCAGACGAAAAAGAGGTAAGGA CTACAGTGAGGATATGCGTGAACTTCCATTCTACTATCCCGGACAGATATGTTACGGGCA AGTAACGACTGTTCACCTCTACCAGGGAGCCTTTGTGAACATTGGTTGTGTCCATGAGGG GTGGGTACCGATAAAAGGAAATGACTGGTACTGGATCCGACATCACATCAAGCCTGGCAT GAAAGTCTACGTGGAGATTCTGGCCAAACGAGACCCTTACCGCTTCCGCTTCCCACTTGA GATGCGATTTGTATATCCTAACATTGATCACCTAATATTTAATAGATTCGACTTCCCACC AATATTTCACCGTAAGGAGGATACTAACCTAGAGCAGTTGTGGCGTGAAGCCGGACGGCC ACCCATTCCTAGGAAAAAACCTTTAAAAGATATGGAAAAGGAACCTTTGGTATCAGACCA TCCTTTTGTTGACACGCTTTGGGAATGGCATAATGCAGAGCAGATGATTTTAGACTACGA GGAACAAAATCCAGATAAATTCAAGAATACAACATATGAGTCCACAGTTGATGCACCCTC AATCGATGAAGAAAAAAGAGTTGAATACACCGAAGGATATTTCAAAGAAACACTGCTAAA AAAGAAAGTTGTGAATATTAGCATCAAAGAACTTGATCTGGATGCTGCCCGTGCTGAACG CCAGCTGATAAAAAGGCTGAAAAAGGAAGCCGAGGAGAGAGGGGAGGAATACAAGGTTAG GAAGCTCCGACGAAACAAAGAAATGGATGAGTATGATCTGATGCAATGGCGTCGTTCATT TGAAGAGAGGGAAGCGCTTATCAGAGACATCTGCTGCCGGAAAGCGCTTGATCTTCCTAT CGAAGAGCCCGGGCGATACGACGTGGACGAGACAGAGGTGTACGGGAAGGATTACTATGA CCCAGAGAAGCCAATGTACCGGTACGACTACTGGGGCGAGCCCAAGAACACGGAGAAGAC GAAGCTGGAGCGGGACGTGGAGCGCCACAACCAGCAGGTGGTCGGCGACGCGAAGAAGTG GTGCGAGATGTCGTACGACGACTACGTCCGCAAGAAGCTGCGGTTGGAAGCGGCTGAGGC GAGGGAAAGGCGGAGGAAGGCGGCCGAGGCGCAAGAGGACGAGCAGGAGTACGATGACGG CATGGACCTGGACCTGAAGAAGATGACCGATCCACGCGCCCCGCACAACCGGTTTTACAT CACGAAATGAAAGGTTAGAGATAGTTGTTAGTTGTGCAAAAGGTTCGATTGCCTTGGTTG TTGTTGTTGGGCCACCGCTTCCGCCTATGGTGCAAGAGTTGGGGGCGCTTGATCAGGTCG TCTGACATTCTCCTTGTTGACCCAACCCCATTCCGATTGGGGCGACCTGGTCAAACGCGG GGGCGTGCTAGCTACGCTCAGTACAAGTATTCAGCATGGAATCTCCAGTATTTTATTCTA GAGAACATATCTTGTGTATATTGAAGTTTAGTGCACATGTTACATATATTAAATCAGTAT CACTCATTTTAGATTTAGCATCTCTAGTTGTTTGATATATTTTGTTAAAGACACGCTCCG ACATTGTGGGTAGTGGTGGACGATGTTATTTATAAATTGCAATGATCAAC