Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012097_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:168219475:168220941:-1 gene:Zm00001d012097 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCCGCCTCTCGCCGCCTCGCGCGGAAGCTGCCGTCTCTGATCTCCCGGTATGAGCGC CTCATCTCCCCGGAGACTGACGCGCCTGAACTCACCGAAGCCCCCACCACCTCCGCATCC ATCCCGTTTGACCCCTCACTCCCTGTCCTTCCGCTCGCCGTCTCCCACCTCTCGCCGCCT AACCCGCTCCCGGTGCTCCCCTCCGCTCACGCTTCCTCCCCCGCCTCTCTCTTTCGTCTC CTCCGCCGAGCCCGCCACCACCCCCGACTCGTGGCGCTCGACCTCCACATCCTGCTGGCC GCCGCAGACGCGTCCTCCGCTTTCCGACCCGACCACAGCCTCACGTCCCTCGTCGCCGCC CGCCTCGCGGCTTCCCGCCGCCTCCCTTCGCTCCAGCGCCTCCTGGAGCTCGTCCTCACC CGCCCCTGCCCCTGTGCCGACGACTCCATCTTTGCATGCCCCGAGCTCCTCCCCACCTTC CGCAAGGCCATCGTCGCCTTCGCCGCCTCCGGCGACATCCCCTCCGCATCGCATGCCCTC GCCTCTCTCCGGCGCGTCGCTGACTCCCCACTACCCGCCGAGTTCTACAACATCATCCTC CAAGCTCTCTCCCGCCTCCGTCGCCACGACGATGCCATTCGCTTCTACGGCGAAATGACC TCCGTCTACCGCGTCGCTCCGGATGTCCACACCTTCAACATACTCATCAGTAGCTCATGC CGGGTGGAAGGCGTAGACGCCGCCATGCGGTGGTTTGGTGAGATGCAGCGCCGGAGCTGT GCACCGACGGTCGTTAGTTTCAACACACTTATGCGTGGGTTCATCAGAGAAGGCAGGTAT AAGGAGGGAACAAAGGTGGCACGCGAGATGCTTGAGCTTGGGGTTGGGCTGTCCGTTGCG TCCATGGAGATTTTGATCGGTGGATTGTGCCGTGGTAGCAAGGCTCTAGAGGCGGCTGAG CTGTTTGTTGAGTTTTTGGGGGATGGGGTGGTGCCAGAAGGGTTTGATTGCTTTGAAGTC GTTGAGGCTCTTTGCCGTGGTGGGAAGGTGGACAGAGCAGTGGAAGCAGTAGACATGGTA TTAGAGAGGAATACCAAATGCTGTATGAGTGCACCTGCTGGCGCCACAGTTTTGGAGTGC CTGATGGAGGCAGGGAAGCTGGATGAGGTTTACCGGTTGATGTGGAGAATGATTGATCAA GGGATTGTTCCGGATTCAATTTCTTGTAACTGCATCTTTGAGGCGCTTTGCGAAGCTGGG AGGACAGCTGATGCTAACCAGCTAAGGGTGTTCGCTAAGGAGAAGGGTTTTGAGGCTGAC GGTGAAACTTATCGTATGCTGGTGCAAGGATTTGGGAGGCAGGGGAAAAGAAAGGAAGGG AAGGCTGTGTTGGATGAAATGCTTGATTTAGGATTTATACCAAATATTGCCTCTTATAAT AGGCTTCTTGGTGGCTTGCATAAGTGA

Peptide Sequence

PEP ID	Zm00001d012097_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:168219475:168220941:-1 gene:Zm00001d012097 transcript:Zm00001d012097_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MAASRRLARKLPSLISRYERLISPETDAPELTEAPTTSASIPFDPSLPVLPLAVSHLSPP NPLPVLPSAHASSPASLFRLLRRARHHPRLVALDLHILLAAADASSAFRPDHSLTSLVAA RLAASRRLPSLQRLLELVLTRPCPCADDSIFACPELLPTFRKAIVAFAASGDIPSASHAL ASLRRVADSPLPAEFYNIILQALSRLRRHDDAIRFYGEMTSVYRVAPDVHTFNILISSSC RVEGVDAAMRWFGEMQRRSCAPTVVSFNTLMRGFIREGRYKEGTKVAREMLELGVGLSVA SMEILIGGLCRGSKALEAAELFVEFLGDGVVPEGFDCFEVVEALCRGGKVDRAVEAVDMV LERNTKCCMSAPAGATVLECLMEAGKLDEVYRLMWRMIDQGIVPDSISCNCIFEALCEAG RTADANQLRVFAKEKGFEADGETYRMLVQGFGRQGKRKEGKAVLDEMLDLGFIPNIASYN RLLGGLHK

Transcript Sequence

Transcript ID	Zm00001d012097_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:168219475:168220941:-1 gene:Zm00001d012097 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCCGCCTCTCGCCGCCTCGCGCGGAAGCTGCCGTCTCTGATCTCCCGGTATGAGCGC CTCATCTCCCCGGAGACTGACGCGCCTGAACTCACCGAAGCCCCCACCACCTCCGCATCC ATCCCGTTTGACCCCTCACTCCCTGTCCTTCCGCTCGCCGTCTCCCACCTCTCGCCGCCT AACCCGCTCCCGGTGCTCCCCTCCGCTCACGCTTCCTCCCCCGCCTCTCTCTTTCGTCTC CTCCGCCGAGCCCGCCACCACCCCCGACTCGTGGCGCTCGACCTCCACATCCTGCTGGCC GCCGCAGACGCGTCCTCCGCTTTCCGACCCGACCACAGCCTCACGTCCCTCGTCGCCGCC CGCCTCGCGGCTTCCCGCCGCCTCCCTTCGCTCCAGCGCCTCCTGGAGCTCGTCCTCACC CGCCCCTGCCCCTGTGCCGACGACTCCATCTTTGCATGCCCCGAGCTCCTCCCCACCTTC CGCAAGGCCATCGTCGCCTTCGCCGCCTCCGGCGACATCCCCTCCGCATCGCATGCCCTC GCCTCTCTCCGGCGCGTCGCTGACTCCCCACTACCCGCCGAGTTCTACAACATCATCCTC CAAGCTCTCTCCCGCCTCCGTCGCCACGACGATGCCATTCGCTTCTACGGCGAAATGACC TCCGTCTACCGCGTCGCTCCGGATGTCCACACCTTCAACATACTCATCAGTAGCTCATGC CGGGTGGAAGGCGTAGACGCCGCCATGCGGTGGTTTGGTGAGATGCAGCGCCGGAGCTGT GCACCGACGGTCGTTAGTTTCAACACACTTATGCGTGGGTTCATCAGAGAAGGCAGGTAT AAGGAGGGAACAAAGGTGGCACGCGAGATGCTTGAGCTTGGGGTTGGGCTGTCCGTTGCG TCCATGGAGATTTTGATCGGTGGATTGTGCCGTGGTAGCAAGGCTCTAGAGGCGGCTGAG CTGTTTGTTGAGTTTTTGGGGGATGGGGTGGTGCCAGAAGGGTTTGATTGCTTTGAAGTC GTTGAGGCTCTTTGCCGTGGTGGGAAGGTGGACAGAGCAGTGGAAGCAGTAGACATGGTA TTAGAGAGGAATACCAAATGCTGTATGAGTGCACCTGCTGGCGCCACAGTTTTGGAGTGC CTGATGGAGGCAGGGAAGCTGGATGAGGTTTACCGGTTGATGTGGAGAATGATTGATCAA GGGATTGTTCCGGATTCAATTTCTTGTAACTGCATCTTTGAGGCGCTTTGCGAAGCTGGG AGGACAGCTGATGCTAACCAGCTAAGGGTGTTCGCTAAGGAGAAGGGTTTTGAGGCTGAC GGTGAAACTTATCGTATGCTGGTGCAAGGATTTGGGAGGCAGGGGAAAAGAAAGGAAGGG AAGGCTGTGTTGGATGAAATGCTTGATTTAGGATTTATACCAAATATTGCCTCTTATAAT AGGCTTCTTGGTGGCTTGCATAAGTGA