Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012083_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:167838170:167839670:-1 gene:Zm00001d012083 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin F-type chloroplastic
Sequence

ATGGCGACCCCCACCGCCACCGCACTCACCTGCTCCTGCCGCCCTTCGTCGCCCTCCTCA
TCATCCGCCGCCTTCCGCCGGCTGAACATCTTCGCCCCCGTCTCGGGCGCCCATTCTCCT
CCTCGACGCCGCCTCCGTCTCGCGCCATTGCACGTCGTCGACGACTCCAAGAACCCCCCC
GAGGAGAGGTCTGAGACGGATAAGATGGTGGACGGCATGGACTTCGGGGAGCTCTGCAGC
GACTTCGAGTGCATAAGCAGCCCCTACGTGGAGTCGACGGCGAGGCAGGTCGCGCGGGAC
ATCCTGGAGCTCCGCGAGGACAACCGCGCATTCAACTGCTACGCCGTCTCCGTCAAGTAC
AAGGACCCACTCAGGACATTTGTTGGGCGTGAGAAGTACAGGAGGCCGTTGTGGATCACC
AAGGCGTTGGAAAACCCTGTAGTGACAGTCCAGGAAATGTCAATGCAGTCGACGAGCAAC
CTGACCATCAGATGGGCGTTGAGAGGGAAGCCTAAGAACCCGTTGTTCGCGAGCGTCGGA
GGAGACGTCATCGTCCGCGTCGAGTCACGGTTCGTCCTGAACCAGATAAGCGGGCAGGTG
CTGGAGCAGGCCGAGTCCTGGGACCTCTCCGCCTCGTCCCTCCCTGCCCAGGCCTACTTC
TGGCTGTCCCGAAGGGTCTACTCCGCCGTGGAGTCCGGGAAGGACGCGATCGAAGCCGCC
AAGAGCGCGGCGTCGTCTGGGCTGACGACCAAGGGAGACCAGAATCTCGAGGCCTATCCG
GATCCTTCTGCTGATCCTACAAAGTTCTTTCAGAGGCCGGATGATGGGTTCAGCCAAGAC
GTGTACCAGATCGGCCTTCTCCTGGCCGTGATCTACTTCATTGTACAGTTTCTGAAGGCG
ACCCTGTGA

Peptide Sequence

PEP ID

Zm00001d012083_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:167838170:167839670:-1 gene:Zm00001d012083 transcript:Zm00001d012083_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin F-type chloroplastic
Sequence

MATPTATALTCSCRPSSPSSSSAAFRRLNIFAPVSGAHSPPRRRLRLAPLHVVDDSKNPP
EERSETDKMVDGMDFGELCSDFECISSPYVESTARQVARDILELREDNRAFNCYAVSVKY
KDPLRTFVGREKYRRPLWITKALENPVVTVQEMSMQSTSNLTIRWALRGKPKNPLFASVG
GDVIVRVESRFVLNQISGQVLEQAESWDLSASSLPAQAYFWLSRRVYSAVESGKDAIEAA
KSAASSGLTTKGDQNLEAYPDPSADPTKFFQRPDDGFSQDVYQIGLLLAVIYFIVQFLKA
TL

Transcript Sequence

Transcript ID

Zm00001d012083_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:167838170:167839670:-1 gene:Zm00001d012083 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin F-type chloroplastic
Sequence

GGCCACCAATGGCGACCCCCACCGCCACCGCACTCACCTGCTCCTGCCGCCCTTCGTCGC
CCTCCTCATCATCCGCCGCCTTCCGCCGGCTGAACATCTTCGCCCCCGTCTCGGGCGCCC
ATTCTCCTCCTCGACGCCGCCTCCGTCTCGCGCCATTGCACGTCGTCGACGACTCCAAGA
ACCCCCCCGAGGAGAGGTCTGAGACGGATAAGATGGTGGACGGCATGGACTTCGGGGAGC
TCTGCAGCGACTTCGAGTGCATAAGCAGCCCCTACGTGGAGTCGACGGCGAGGCAGGTCG
CGCGGGACATCCTGGAGCTCCGCGAGGACAACCGCGCATTCAACTGCTACGCCGTCTCCG
TCAAGTACAAGGACCCACTCAGGACATTTGTTGGGCGTGAGAAGTACAGGAGGCCGTTGT
GGATCACCAAGGCGTTGGAAAACCCTGTAGTGACAGTCCAGGAAATGTCAATGCAGTCGA
CGAGCAACCTGACCATCAGATGGGCGTTGAGAGGGAAGCCTAAGAACCCGTTGTTCGCGA
GCGTCGGAGGAGACGTCATCGTCCGCGTCGAGTCACGGTTCGTCCTGAACCAGATAAGCG
GGCAGGTGCTGGAGCAGGCCGAGTCCTGGGACCTCTCCGCCTCGTCCCTCCCTGCCCAGG
CCTACTTCTGGCTGTCCCGAAGGGTCTACTCCGCCGTGGAGTCCGGGAAGGACGCGATCG
AAGCCGCCAAGAGCGCGGCGTCGTCTGGGCTGACGACCAAGGGAGACCAGAATCTCGAGG
CCTATCCGGATCCTTCTGCTGATCCTACAAAGTTCTTTCAGAGGCCGGATGATGGGTTCA
GCCAAGACGTGTACCAGATCGGCCTTCTCCTGGCCGTGATCTACTTCATTGTACAGTTTC
TGAAGGCGACCCTGTGACCGGCTGCAGCCTGTCGAAGAATGTAGCCTGTGTGCAGTATAC
ATGTATGTAACTATGCCTAGCAACATTATAAAATACGGGCATATATCATCCTG