Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012061_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:8:167518601:167528413:1 gene:Zm00001d012061 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-4 complex subunit epsilon
Sequence	ATGGGTTTAAGCTTTCAGTTGTCACCATGCTATCCGGCTATCTGCCTTAGATTTTGTTTC TGTCATCGGCAGATAAAACTATTGAAGATACTTGCTGTGCTTGGCAGTGGTGATAAACAA GCAAGTGGACATATGTACACTGTATTGGGCGACATATTCAAGAAGGGTGACACTGCGAGC AACATTGGCAATGCTATACTGTATGAATGCATATGCTGCATTTCATCCATTTTCCCAAAC CCTAAGATGCTAGTGGCTGCAGCTGAAACAACATCAAAGTTTCTGAAGAGTGATAGTCAT AATCTTAAGTACATGGGCATTGATGCTCTTGGCAGGTTAATAAAAATAAATCCAGATATT GCAGAAGAGCACCAGCTGGCTGTCATTGATTGCTTAGAGGACCCAGATGACACTTTGAAG CGCAAGACATTTGAGCTTCTTTATAAGATGACAAAGTCAACAAATGTTGAGGTGATTGTT GATAGGATGATTGAGTACATGATCAACATAACTGATCATCATTACAAGACAGAAATTGCA TCACGTTGTGTCGAACTCGCAGAGCAATTTGCGCCTAGCAATCAGTGGTTCATCCAGACC ATGAACAGAGTTTTTGAGCATGCTGGAGATCTTGTCAACATCAGAGTGGCACACAATTTG ATGCGGCTAATTGCTGAAGGCTTTGGAGATGAGGACGAAGGTGCTGACAGTCAGCTAAGA TCATCGGCTGTAGATTCTTATGTCCGCATTGTCGGAGAGCCAAAGCTTCCTTCTTCTTTC CTTCAGATAATATGCTGGGTGTTGGGGGAATATGGAACAGCAGATGGAAAACATTCGGCT TCTTATATTATTGGGAAATTGTGTGATGTGGCAGAGGCCCACCTCACTGATGACACTGTC AAGGCGTATGCAATCTCAGCAATTCTGAAGATATTTGCGTTTGAAATCGCTCTTGGAAGG AGGATTGATTTGCTGCCTGAGTGTCAAACATTGGTAGATGAATTGTTAGCTTCACATTCA ACAGACCTGCAGCAACGGGCATACGAGCTACATGCTTTACTAGGCTTGGGCAAAAATGAT GTTGAAAGTGTTATGCCTGCAGATGCAAGCTGTGAAGATATTGAGGTCGACAGAAACCTC TCATTTCTAGACAGTTATGTGCAGCAAGCCTTGGAAAACGGTGCATCACCTTACATTCCA GAGAGTGAACGCTCTGGTCTTACAAGTGTTGGCAGCTACAGAAGCCAAGAACAACAGGAA ACATCTGCCCATACTCTTAGATTCGAGGCCTATGAGATGCCTAAACCTTCTTTGCCACTA GCAACTTCACAAACCAGCATGTCCACACCAAATACTGACCTTGTTCCAGTTTCAGAGCCA GGCTACTATAAGGAAGACCATCAAACATCAAGGCCTCAACCACCAAGCGATGCGGTTTCT GGTGAGTTTGGTGTCAAACTCCGCCTTGATGGGGTTCAAAAGAAATGGGGAAGGTCAACA TATTCCTCTTCCACACCCTCAAGCTCGATGTCCAGTCAACAAACAACAAATGGGGCCTCT CATTCTGATGGGGGAGGGCCAAGTTCACAGCCACGGGAGTCCTCATACGGTTCGAAGAGA CAGCAGGGCACAGAAGTCTCAGCAGAAAAGCAACGGCTGGCTGCTTCGCTTTTTGGTTCG GCAGCAGCTAGAGCTGACAGGAAAGCACAAGCTTCTCGAAAGACAGGGAAGGACAGTCCC TCAACTGAGAAAGTAGCTACCACTAATGTGGCTGCCCAGTCTGTTAAGGAGCAAGTAATC CCAGCTGCTGCACCACCGCCTGATCTGCTGGATCTGGGTGACGAGACAGTTCCATCGAGC CGTCCATCGGCTGACCCTTTCTCACAGTTGGTGGGTCTTCTTGGACCAGCATCTGCTGCT CCGGCGCTTTCTGGGACTCCGGCTACCACTACCAGTACTTCCAAAGCACCAGATCTTATG TCAATCTTCTCAGATGATGTACCAACTGGAGTGACTAGTAGTGGGTCCACCGATCCCACT CCAGGTGATGCTATTTCGGTGAGCTCCCACAAAGGAGCGACGGCAGTGGCACCAAAGAAG GGCTCGAGCCTTCAAGATGCCTTGCAAAAGGACTCGACTGCACGGCAAGTAGGTGTGACA CCGACAGGGAACAACCCCAATCTTTTCAAGGACTTGCTAGGCTAA

Peptide Sequence

PEP ID	Zm00001d012061_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:8:167518601:167528413:1 gene:Zm00001d012061 transcript:Zm00001d012061_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-4 complex subunit epsilon
Sequence	MGLSFQLSPCYPAICLRFCFCHRQIKLLKILAVLGSGDKQASGHMYTVLGDIFKKGDTAS NIGNAILYECICCISSIFPNPKMLVAAAETTSKFLKSDSHNLKYMGIDALGRLIKINPDI AEEHQLAVIDCLEDPDDTLKRKTFELLYKMTKSTNVEVIVDRMIEYMINITDHHYKTEIA SRCVELAEQFAPSNQWFIQTMNRVFEHAGDLVNIRVAHNLMRLIAEGFGDEDEGADSQLR SSAVDSYVRIVGEPKLPSSFLQIICWVLGEYGTADGKHSASYIIGKLCDVAEAHLTDDTV KAYAISAILKIFAFEIALGRRIDLLPECQTLVDELLASHSTDLQQRAYELHALLGLGKND VESVMPADASCEDIEVDRNLSFLDSYVQQALENGASPYIPESERSGLTSVGSYRSQEQQE TSAHTLRFEAYEMPKPSLPLATSQTSMSTPNTDLVPVSEPGYYKEDHQTSRPQPPSDAVS GEFGVKLRLDGVQKKWGRSTYSSSTPSSSMSSQQTTNGASHSDGGGPSSQPRESSYGSKR QQGTEVSAEKQRLAASLFGSAAARADRKAQASRKTGKDSPSTEKVATTNVAAQSVKEQVI PAAAPPPDLLDLGDETVPSSRPSADPFSQLVGLLGPASAAPALSGTPATTTSTSKAPDLM SIFSDDVPTGVTSSGSTDPTPGDAISVSSHKGATAVAPKKGSSLQDALQKDSTARQVGVT PTGNNPNLFKDLLG

Transcript Sequence

Transcript ID	Zm00001d012061_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:167518601:167528413:1 gene:Zm00001d012061 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-4 complex subunit epsilon
Sequence	TTGAGTTAAATTAAACATTATTTATTTGTTAGGTGCTGCTAGGTTGCTATTGCGAGTTAT GCTTCTTTTATGGGTTTAAGCTTTCAGTTGTCACCATGCTATCCGGCTATCTGCCTTAGA TTTTGTTTCTGTCATCGGCAGATAAAACTATTGAAGATACTTGCTGTGCTTGGCAGTGGT GATAAACAAGCAAGTGGACATATGTACACTGTATTGGGCGACATATTCAAGAAGGGTGAC ACTGCGAGCAACATTGGCAATGCTATACTGTATGAATGCATATGCTGCATTTCATCCATT TTCCCAAACCCTAAGATGCTAGTGGCTGCAGCTGAAACAACATCAAAGTTTCTGAAGAGT GATAGTCATAATCTTAAGTACATGGGCATTGATGCTCTTGGCAGGTTAATAAAAATAAAT CCAGATATTGCAGAAGAGCACCAGCTGGCTGTCATTGATTGCTTAGAGGACCCAGATGAC ACTTTGAAGCGCAAGACATTTGAGCTTCTTTATAAGATGACAAAGTCAACAAATGTTGAG GTGATTGTTGATAGGATGATTGAGTACATGATCAACATAACTGATCATCATTACAAGACA GAAATTGCATCACGTTGTGTCGAACTCGCAGAGCAATTTGCGCCTAGCAATCAGTGGTTC ATCCAGACCATGAACAGAGTTTTTGAGCATGCTGGAGATCTTGTCAACATCAGAGTGGCA CACAATTTGATGCGGCTAATTGCTGAAGGCTTTGGAGATGAGGACGAAGGTGCTGACAGT CAGCTAAGATCATCGGCTGTAGATTCTTATGTCCGCATTGTCGGAGAGCCAAAGCTTCCT TCTTCTTTCCTTCAGATAATATGCTGGGTGTTGGGGGAATATGGAACAGCAGATGGAAAA CATTCGGCTTCTTATATTATTGGGAAATTGTGTGATGTGGCAGAGGCCCACCTCACTGAT GACACTGTCAAGGCGTATGCAATCTCAGCAATTCTGAAGATATTTGCGTTTGAAATCGCT CTTGGAAGGAGGATTGATTTGCTGCCTGAGTGTCAAACATTGGTAGATGAATTGTTAGCT TCACATTCAACAGACCTGCAGCAACGGGCATACGAGCTACATGCTTTACTAGGCTTGGGC AAAAATGATGTTGAAAGTGTTATGCCTGCAGATGCAAGCTGTGAAGATATTGAGGTCGAC AGAAACCTCTCATTTCTAGACAGTTATGTGCAGCAAGCCTTGGAAAACGGTGCATCACCT TACATTCCAGAGAGTGAACGCTCTGGTCTTACAAGTGTTGGCAGCTACAGAAGCCAAGAA CAACAGGAAACATCTGCCCATACTCTTAGATTCGAGGCCTATGAGATGCCTAAACCTTCT TTGCCACTAGCAACTTCACAAACCAGCATGTCCACACCAAATACTGACCTTGTTCCAGTT TCAGAGCCAGGCTACTATAAGGAAGACCATCAAACATCAAGGCCTCAACCACCAAGCGAT GCGGTTTCTGGTGAGTTTGGTGTCAAACTCCGCCTTGATGGGGTTCAAAAGAAATGGGGA AGGTCAACATATTCCTCTTCCACACCCTCAAGCTCGATGTCCAGTCAACAAACAACAAAT GGGGCCTCTCATTCTGATGGGGGAGGGCCAAGTTCACAGCCACGGGAGTCCTCATACGGT TCGAAGAGACAGCAGGGCACAGAAGTCTCAGCAGAAAAGCAACGGCTGGCTGCTTCGCTT TTTGGTTCGGCAGCAGCTAGAGCTGACAGGAAAGCACAAGCTTCTCGAAAGACAGGGAAG GACAGTCCCTCAACTGAGAAAGTAGCTACCACTAATGTGGCTGCCCAGTCTGTTAAGGAG CAAGTAATCCCAGCTGCTGCACCACCGCCTGATCTGCTGGATCTGGGTGACGAGACAGTT CCATCGAGCCGTCCATCGGCTGACCCTTTCTCACAGTTGGTGGGTCTTCTTGGACCAGCA TCTGCTGCTCCGGCGCTTTCTGGGACTCCGGCTACCACTACCAGTACTTCCAAAGCACCA GATCTTATGTCAATCTTCTCAGATGATGTACCAACTGGAGTGACTAGTAGTGGGTCCACC GATCCCACTCCAGGTGATGCTATTTCGGTGAGCTCCCACAAAGGAGCGACGGCAGTGGCA CCAAAGAAGGGCTCGAGCCTTCAAGATGCCTTGCAAAAGGACTCGACTGCACGGCAAGTA GGTGTGACACCGACAGGGAACAACCCCAATCTTTTCAAGGACTTGCTAGGCTAAAGGGGA CAGTAAGGCACACCGTATGCTCCGCGTGGCCTCTTTGGGTAGATGGAGTTCATCTCCGAC ATGTCTCGATCACTGAAACAGCGATGATCTCGCTGTTTGATCAGCGTAGGAAAAGGGTTG CAACTTGCAAGGGCTATATTTGTTCTCGAGTCACAAGACACGACCTGTCCTCCTTCCAGT TGGGAGGGGGGTTGCGCTGTTGAGATCTGTGAATGGTTGCGGGTATTTTTCCTTTAACCT CTTGTGATTTTGTGCTGAGACTATTGTACATGTGTTTACATGACGTGTAATCTGTACATG AGACCGTGGTACAGAAGCGTGTGCCGGCGCATTTTTGTTCAGCTGGGCTAGATACACTAC AATTGCTGGGCACTGGAAAGTAAAACAATGAAAGAATTGGTGTCATTCTCTGGCTGGAAT AAAAATATAAAACGGTAAATGTGTAGTGTTGTTTATTGTTGATGAAAACAGTCGCAGATT TGTTTTTGCAACTTTTAACTGTTGAGAAGTAATGCAATTCTTTTTTTTTCGGTT