Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012060_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:8:167470951:167476347:1 gene:Zm00001d012060 gene_biotype:protein_coding transcript_biotype:protein_coding description:WW domain-containing protein
Sequence

ATGACAGCTGATCATCGTGCAGAGATGGCAAGCAAAAGGGGGAAGCCACTTCATCCAAAC
AATGGCAACTGTGAAATTGGCAATGGCTATGGTGTACCTGGAGGCGGTGCTTATTATGCT
GCAAACTTGCCAAGTCCTCAAATGAATAAACCTAGAGATGAAACTGATAAAGCTAAATGT
GCAAACGATCTCCCTGATTTTTTAAAGCAGAGGTTAAGGGCAAGGGGAATTCTCAAAGAT
GAGACTACAAATAAGAATTACACGAGTACGCAGACTGTGGATTCTCAAGAAATCGAGAAC
AAATCTGCACAAGAGTTGCCTCCTGGTTGGATTGAAGTGAAGGACCCGACAACTGGAGCG
CCATACTTCTACAATCAAAGCACTGGAGTGAGTCAATGGGATCGCCCTGACAGTGTTGTG
AATATCATGCAACATCAAGTTTCTCCATCCTTGCCAGAGAACTGGGAGGAGGCAATTGAC
AAATCAACAGGCCACAAATACTATTATAACACGAAGACACAGACCACACAATGGGAACCT
CCTACTTCTGTGAACACCAGTGTTAGACCTCCAGCTTCCACCAACACTGCAGTTGAGCCA
GTCGCTCAAGCTGCAGATATTTGGAACTCTCAAATGCAGAGATGTTTGGGCTGTGGTGGA
TGGGGAGTTGGTCTTGTCCAGCCTTGGGGATACTGCAATCACTGCACAAGGGTTCAAAAT
CGTCCTTTTCAACAGTACCCATCTTACACAAATAATACGATGCACGCCAGTGGTAACAAT
GCTCCCAAAGCTCAGGGGAATGTTTCAGCTAAGAACAGATCAAGCTCAAAGCCACCTTTA
GGGAAACCAAACAGAAAAGACCACCGCAAAAGAAATCGCCCCGAGGATGATGAACTTGAC
CCAATGGACCCGAGTTCTTACTCAGATGCTCCACGCGGTGGCTGGGTTGTTGGTTTGAAG
GGTGTTCAACCACGAGCAGCAGATACTACCGCAGCTGGACCTTTGTTCCAACAAAGACCA
TATCCCTCACCGGGTGCTGTGTTGAGAAAAAATGCAGAGGTAGCAACCCATGGCAAGAAA
CGTGGTGGTATGGCTCCGATAACAAAAAGAGGAGATGGCAGCGACGGACTTGGGGAGGCA
GATTAG

Peptide Sequence

PEP ID

Zm00001d012060_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:8:167470951:167476347:1 gene:Zm00001d012060 transcript:Zm00001d012060_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:WW domain-containing protein
Sequence

MTADHRAEMASKRGKPLHPNNGNCEIGNGYGVPGGGAYYAANLPSPQMNKPRDETDKAKC
ANDLPDFLKQRLRARGILKDETTNKNYTSTQTVDSQEIENKSAQELPPGWIEVKDPTTGA
PYFYNQSTGVSQWDRPDSVVNIMQHQVSPSLPENWEEAIDKSTGHKYYYNTKTQTTQWEP
PTSVNTSVRPPASTNTAVEPVAQAADIWNSQMQRCLGCGGWGVGLVQPWGYCNHCTRVQN
RPFQQYPSYTNNTMHASGNNAPKAQGNVSAKNRSSSKPPLGKPNRKDHRKRNRPEDDELD
PMDPSSYSDAPRGGWVVGLKGVQPRAADTTAAGPLFQQRPYPSPGAVLRKNAEVATHGKK
RGGMAPITKRGDGSDGLGEAD

Transcript Sequence

Transcript ID

Zm00001d012060_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:167470951:167476347:1 gene:Zm00001d012060 gene_biotype:protein_coding transcript_biotype:protein_coding description:WW domain-containing protein
Sequence

GCGCGTTCGCTCGCTCTCGTGGCGCAACTCGTAGACCGCCGCCGCCTCCGCTCTACGCCA
GGTGCCTAGGTCTAGCTTCGTCGGTCCCTTCGCCAACGACGAGCACCCACCCGATTGCGA
GATCTGACGCCAGAAGTTCAGCTAGGAGTGCATCTTGTTTACCTGTTGCTTAATCATGGA
CAACTCTCAGAATCAACCACCACCACCTGGTGTTGGAACATGGCCGCAGACACCTCCTAG
TCACCCGCCACAATGCCATGCTGATCCACAGTCTTATCATCCACAATTTGCTGCTAGACC
TGACAATGCTAGTGCCAATAATAGTGGTAGTTCAGCAAACATTGAGTCAGCTGTCCAGGA
GGCTGTTCTTCACGCGCAGAGACTCAGCAAGTCATACAGAATCAAAGATATGCAAACACA
ACAAGTGAACCTACAAAATATGGGGAAGACTTACTTTCGAACCGCCGTGACCCTAATGCA
TTGAAGGAGCATTTACTAAAGATGACAGCTGATCATCGTGCAGAGATGGCAAGCAAAAGG
GGGAAGCCACTTCATCCAAACAATGGCAACTGTGAAATTGGCAATGGCTATGGTGTACCT
GGAGGCGGTGCTTATTATGCTGCAAACTTGCCAAGTCCTCAAATGAATAAACCTAGAGAT
GAAACTGATAAAGCTAAATGTGCAAACGATCTCCCTGATTTTTTAAAGCAGAGGTTAAGG
GCAAGGGGAATTCTCAAAGATGAGACTACAAATAAGAATTACACGAGTACGCAGACTGTG
GATTCTCAAGAAATCGAGAACAAATCTGCACAAGAGTTGCCTCCTGGTTGGATTGAAGTG
AAGGACCCGACAACTGGAGCGCCATACTTCTACAATCAAAGCACTGGAGTGAGTCAATGG
GATCGCCCTGACAGTGTTGTGAATATCATGCAACATCAAGTTTCTCCATCCTTGCCAGAG
AACTGGGAGGAGGCAATTGACAAATCAACAGGCCACAAATACTATTATAACACGAAGACA
CAGACCACACAATGGGAACCTCCTACTTCTGTGAACACCAGTGTTAGACCTCCAGCTTCC
ACCAACACTGCAGTTGAGCCAGTCGCTCAAGCTGCAGATATTTGGAACTCTCAAATGCAG
AGATGTTTGGGCTGTGGTGGATGGGGAGTTGGTCTTGTCCAGCCTTGGGGATACTGCAAT
CACTGCACAAGGGTTCAAAATCGTCCTTTTCAACAGTACCCATCTTACACAAATAATACG
ATGCACGCCAGTGGTAACAATGCTCCCAAAGCTCAGGGGAATGTTTCAGCTAAGAACAGA
TCAAGCTCAAAGCCACCTTTAGGGAAACCAAACAGAAAAGACCACCGCAAAAGAAATCGC
CCCGAGGATGATGAACTTGACCCAATGGACCCGAGTTCTTACTCAGATGCTCCACGCGGT
GGCTGGGTTGTTGGTTTGAAGGGTGTTCAACCACGAGCAGCAGATACTACCGCAGCTGGA
CCTTTGTTCCAACAAAGACCATATCCCTCACCGGGTGCTGTGTTGAGAAAAAATGCAGAG
GTAGCAACCCATGGCAAGAAACGTGGTGGTATGGCTCCGATAACAAAAAGAGGAGATGGC
AGCGACGGACTTGGGGAGGCAGATTAGTCTTTTGGTGAACTGAAATGTTGTGCTATCCGA
ATCTCCTTGGTGGTTGTCTCTGGAGCTGCTAAACTATCATTGCACGCCTGAAGAAAATCG
AAAAAATATTGGCTGCCAGATCTGGAATGAGGAAACTCACTACAGTTCGCGAGTTTTTGC
AGCGATTAACGCTAGTGTACTCGCTGGACCTCGAGGCTAGAGCAATGCGAGCTCACCCCG
GCTTGCTGATGACACATTCACTGAGTTCACTGCGGTTTGCCGATGACATTCAATGTGCCC
TTGGTGTGAATTTTATATGAAAATGAACTATAATCTGTAATTGGAAAGAGTGATTTCAAT
GTAAGGAATTAACTT