Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012036_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:166918025:166923213:1 gene:Zm00001d012036 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose phosphate synthase1 description:Sucrose-phosphate synthase

Sequence

ATGAACTTCAACCCCTCTCACTACTTCGTCGAGGAGGTGGTCAAGGGCGTCGACGAGAGC
GACCTCCACCGGACGTGGATCAAGGTCGTCGCCACCCGCAACGCCCGCGAGCGCAGCACC
AGGCTCGAGAACATGTGCTGGCGGATCTGGCACCTCGCGCGCAAGAAGAAGCAGCTGGAG
CTGGAGGGCATCCAGAGAATCTCGGCAAGAAGGAAGGAACAGGAGCAGGTGCGTCGTGAG
GCGACGGAGGACCTGGCCGAGGATCTGTCAGAAGGCGAGAAGGGAGACACCATCGGCGAG
CTTGCGCCGGTTGAGACGACCAAGAAGAAGTTCCAGAGGAACTTCTCTGACCTTACCGTC
TGGTCTGACGACAATAAGGAGAAGAAGCTTTACATTGTGCTCATCAGCGTGCATGGTCTT
GTTCGTGGAGAAAACATGGAACTAGGTCGTGATTCTGATACAGGTGGCCAGGTGAAATAT
GTGGTCGAACTTGCAAGAGCGATGTCAATGATGCCTGGAGTGTACAGGGTGGACCTCTTC
ACTCGTCAAGTGTCATCTCCTGACGTGGACTGGAGCTACGGTGAGCCAACCGAGATGTTA
TGCGCCGGTTCCAATGATGGAGAGGGGATGGGTGAGAGTGGCGGAGCCTACATTGTGCGC
ATACCGTGTGGGCCGCGGGATAAATACCTCAAGAAGGAAGCGTTGTGGCCTTACCTCCAA
GAGTTTGTCGATGGAGCCCTTGCGCATATCCTGAACATGTCCAAGGCTCTGGGAGAGCAG
GTTGGAAATGGGAGGCCAGTACTGCCTTACGTGATACATGGGCACTATGCCGATGCTGGA
GATGTTGCTGCTCTCCTTTCTGGTGCGCTGAATGTGCCAATGGTGCTCACTGGCCACTCA
CTTGGGAGGAACAAGCTGGAACAACTGCTGAAGCAAGGGCGCATGTCCAAGGAGGAGATC
GATTCGACATACAAGATCATGAGGCGTATCGAGGGTGAGGAGCTGGCCCTGGATGCGTCA
GAGCTTGTAATCACGAGCACAAGGCAGGAGATTGATGAGCAGTGGGGATTGTACGATGGA
TTTGATGTCAAGCTTGAGAAAGTGCTGAGGGCACGGGCGAGGCGCGGGGTTAGCTGCCAT
GGTCGTTACATGCCTAGGATGGTGGTGATTCCTCCGGGAATGGATTTCAGCAATGTTGTA
GTTCATGAAGACATTGATGGGGATGGTGACGTCAAAGATGATATCGTTGGTTTGGAGGGT
GCCTCACCCAAGTCAATGCCCCCAATTTGGGCCGAAGTGATGCGGTTCCTGACCAACCCT
CACAAGCCGATGATCCTGGCGTTATCAAGACCAGACCCGAAGAAGAACATCACTACCCTC
GTCAAAGCGTTTGGAGAGTGTCGTCCACTCAGGGAACTTGCAAACCTTACTCTGATCATG
GGTAACAGAGATGACATCGACGACATGTCTGCTGGCAATGCCAGTGTCCTCACCACAGTT
CTGAAGCTGATTGACAAGTATGATCTGTACGGAAGCGTGGCGTTCCCTAAGCATCACAAT
CAGGCTGACGTCCCGGAGATCTATCGCCTCGCGGCCAAAATGAAGGGCGTCTTCATCAAC
CCTGCTCTCGTTGAGCCGTTTGGTCTCACCCTGATCGAGGCTGCGGCACACGGACTCCCG
ATAGTCGCTACCAAGAATGGTGGTCCGGTCGACATTACAAATGCATTAAACAACGGACTG
CTCGTTGACCCACACGACCAGAACGCCATCGCTGATGCACTGCTGAAGCTTGTGGCAGAC
AAGAACCTGTGGCAGGAATGCCGGAGAAACGGGCTGCGCAACATCCACCTCTACTCATGG
CCGGAGCACTGCCGCACTTACCTCACCAGGGTGGCCGGGTGCCGGTTAAGGAACCCGAGG
TGGCTGAAGGACACACCAGCAGATGCCGGAGCCGATGAGGAGGAGTTCCTGGAGGATTCC
ATGGACGCTCAGGACCTGTCACTCCGTCTGTCCATCGACGGTGAGAAGAGCTCGCTGAAC
ACTAACGATCCACTGTGGTTCGACCCCCAGGATCAAGTGCAGAAGATCATGAACAACATC
AAGCAGTCGTCAGCGCTTCCTCCGTCCATGTCCTCAGTCGCAGCCGAGGGCACAGGCAGC
ACCATGAACAAATACCCACTCCTGCGCCGGCGCCGGCGCTTGTTCGTCATAGCTGTGGAC
TGCTACCAGGACGATGGCCGTGCTAGCAAGAAGATGCTGCAGGTGATCCAGGAAGTTTTC
AGAGCAGTCCGATCGGACTCCCAGATGTTCAAGATCTCAGGGTTCACGCTGTCGACTGCC
ATGCCGTTGTCCGAGACACTCCAGCTTCTGCAGCTCGGCAAGATCCCAGCGACCGACTTC
GACGCCCTCATCTGTGGCAGCGGCAGCGAGGTGTACTATCCTGGCACGGCGAACTGCATG
GACGCTGAAGGAAAGCTGCGCCCAGATCAGGACTATCTGATGCACATCATGTACTGCAGG
AACTCGACAAGGCTTCAGGTTGTCCCTCTGCTAGCATCAAGGTCACAGGCACTCAGGTAT
CTTTCCGTGCGCTGGGGCGTATCTGTGGGGAACATGTATCTGATCACCGGGGAACATGGC
GACACCGATCTAGAGGAGATGCTATCCGGGCTACACAAGACCGTGATCGTCCGTGGCGTC
ACCGAGAAGGGTTCGGAAGCACTGGTGAGGAGCCCAGGAAGCTACAAGAGGGACGATGTC
GTCCCGTCTGAGACCCCCTTGGCTGCGTACACGACTGGTGAGCTGAAGGCCGACGAGATC
ATGCGGGCTCTGAAGCAAGTCTCCAAGACTTCCAGCGGCATGTGA

Peptide Sequence

PEP ID

Zm00001d012036_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:166918025:166923213:1 gene:Zm00001d012036 transcript:Zm00001d012036_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose phosphate synthase1 description:Sucrose-phosphate synthase

Sequence

MNFNPSHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQLE
LEGIQRISARRKEQEQVRREATEDLAEDLSEGEKGDTIGELAPVETTKKKFQRNFSDLTV
WSDDNKEKKLYIVLISVHGLVRGENMELGRDSDTGGQVKYVVELARAMSMMPGVYRVDLF
TRQVSSPDVDWSYGEPTEMLCAGSNDGEGMGESGGAYIVRIPCGPRDKYLKKEALWPYLQ
EFVDGALAHILNMSKALGEQVGNGRPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHS
LGRNKLEQLLKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGLYDG
FDVKLEKVLRARARRGVSCHGRYMPRMVVIPPGMDFSNVVVHEDIDGDGDVKDDIVGLEG
ASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIM
GNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVFIN
PALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALLKLVAD
KNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGADEEEFLEDS
MDAQDLSLRLSIDGEKSSLNTNDPLWFDPQDQVQKIMNNIKQSSALPPSMSSVAAEGTGS
TMNKYPLLRRRRRLFVIAVDCYQDDGRASKKMLQVIQEVFRAVRSDSQMFKISGFTLSTA
MPLSETLQLLQLGKIPATDFDALICGSGSEVYYPGTANCMDAEGKLRPDQDYLMHIMYCR
NSTRLQVVPLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGV
TEKGSEALVRSPGSYKRDDVVPSETPLAAYTTGELKADEIMRALKQVSKTSSGM

Transcript Sequence

Transcript ID

Zm00001d012036_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:166918025:166923213:1 gene:Zm00001d012036 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose phosphate synthase1 description:Sucrose-phosphate synthase

Sequence

TACCTGGAGGCGATCCTCGACAGCCACACCTCGTCGCGGGGTGCCGGCGGCGGCGGCGGC
GGCGGGGACCCCAGGTCGCCGACGAAGGCGGCGAGCCCCCGCGGCGCGCACATGAACTTC
AACCCCTCTCACTACTTCGTCGAGGAGGTGGTCAAGGGCGTCGACGAGAGCGACCTCCAC
CGGACGTGGATCAAGGTCGTCGCCACCCGCAACGCCCGCGAGCGCAGCACCAGGCTCGAG
AACATGTGCTGGCGGATCTGGCACCTCGCGCGCAAGAAGAAGCAGCTGGAGCTGGAGGGC
ATCCAGAGAATCTCGGCAAGAAGGAAGGAACAGGAGCAGGTGCGTCGTGAGGCGACGGAG
GACCTGGCCGAGGATCTGTCAGAAGGCGAGAAGGGAGACACCATCGGCGAGCTTGCGCCG
GTTGAGACGACCAAGAAGAAGTTCCAGAGGAACTTCTCTGACCTTACCGTCTGGTCTGAC
GACAATAAGGAGAAGAAGCTTTACATTGTGCTCATCAGCGTGCATGGTCTTGTTCGTGGA
GAAAACATGGAACTAGGTCGTGATTCTGATACAGGTGGCCAGGTGAAATATGTGGTCGAA
CTTGCAAGAGCGATGTCAATGATGCCTGGAGTGTACAGGGTGGACCTCTTCACTCGTCAA
GTGTCATCTCCTGACGTGGACTGGAGCTACGGTGAGCCAACCGAGATGTTATGCGCCGGT
TCCAATGATGGAGAGGGGATGGGTGAGAGTGGCGGAGCCTACATTGTGCGCATACCGTGT
GGGCCGCGGGATAAATACCTCAAGAAGGAAGCGTTGTGGCCTTACCTCCAAGAGTTTGTC
GATGGAGCCCTTGCGCATATCCTGAACATGTCCAAGGCTCTGGGAGAGCAGGTTGGAAAT
GGGAGGCCAGTACTGCCTTACGTGATACATGGGCACTATGCCGATGCTGGAGATGTTGCT
GCTCTCCTTTCTGGTGCGCTGAATGTGCCAATGGTGCTCACTGGCCACTCACTTGGGAGG
AACAAGCTGGAACAACTGCTGAAGCAAGGGCGCATGTCCAAGGAGGAGATCGATTCGACA
TACAAGATCATGAGGCGTATCGAGGGTGAGGAGCTGGCCCTGGATGCGTCAGAGCTTGTA
ATCACGAGCACAAGGCAGGAGATTGATGAGCAGTGGGGATTGTACGATGGATTTGATGTC
AAGCTTGAGAAAGTGCTGAGGGCACGGGCGAGGCGCGGGGTTAGCTGCCATGGTCGTTAC
ATGCCTAGGATGGTGGTGATTCCTCCGGGAATGGATTTCAGCAATGTTGTAGTTCATGAA
GACATTGATGGGGATGGTGACGTCAAAGATGATATCGTTGGTTTGGAGGGTGCCTCACCC
AAGTCAATGCCCCCAATTTGGGCCGAAGTGATGCGGTTCCTGACCAACCCTCACAAGCCG
ATGATCCTGGCGTTATCAAGACCAGACCCGAAGAAGAACATCACTACCCTCGTCAAAGCG
TTTGGAGAGTGTCGTCCACTCAGGGAACTTGCAAACCTTACTCTGATCATGGGTAACAGA
GATGACATCGACGACATGTCTGCTGGCAATGCCAGTGTCCTCACCACAGTTCTGAAGCTG
ATTGACAAGTATGATCTGTACGGAAGCGTGGCGTTCCCTAAGCATCACAATCAGGCTGAC
GTCCCGGAGATCTATCGCCTCGCGGCCAAAATGAAGGGCGTCTTCATCAACCCTGCTCTC
GTTGAGCCGTTTGGTCTCACCCTGATCGAGGCTGCGGCACACGGACTCCCGATAGTCGCT
ACCAAGAATGGTGGTCCGGTCGACATTACAAATGCATTAAACAACGGACTGCTCGTTGAC
CCACACGACCAGAACGCCATCGCTGATGCACTGCTGAAGCTTGTGGCAGACAAGAACCTG
TGGCAGGAATGCCGGAGAAACGGGCTGCGCAACATCCACCTCTACTCATGGCCGGAGCAC
TGCCGCACTTACCTCACCAGGGTGGCCGGGTGCCGGTTAAGGAACCCGAGGTGGCTGAAG
GACACACCAGCAGATGCCGGAGCCGATGAGGAGGAGTTCCTGGAGGATTCCATGGACGCT
CAGGACCTGTCACTCCGTCTGTCCATCGACGGTGAGAAGAGCTCGCTGAACACTAACGAT
CCACTGTGGTTCGACCCCCAGGATCAAGTGCAGAAGATCATGAACAACATCAAGCAGTCG
TCAGCGCTTCCTCCGTCCATGTCCTCAGTCGCAGCCGAGGGCACAGGCAGCACCATGAAC
AAATACCCACTCCTGCGCCGGCGCCGGCGCTTGTTCGTCATAGCTGTGGACTGCTACCAG
GACGATGGCCGTGCTAGCAAGAAGATGCTGCAGGTGATCCAGGAAGTTTTCAGAGCAGTC
CGATCGGACTCCCAGATGTTCAAGATCTCAGGGTTCACGCTGTCGACTGCCATGCCGTTG
TCCGAGACACTCCAGCTTCTGCAGCTCGGCAAGATCCCAGCGACCGACTTCGACGCCCTC
ATCTGTGGCAGCGGCAGCGAGGTGTACTATCCTGGCACGGCGAACTGCATGGACGCTGAA
GGAAAGCTGCGCCCAGATCAGGACTATCTGATGCACATCATGTACTGCAGGAACTCGACA
AGGCTTCAGGTTGTCCCTCTGCTAGCATCAAGGTCACAGGCACTCAGGTATCTTTCCGTG
CGCTGGGGCGTATCTGTGGGGAACATGTATCTGATCACCGGGGAACATGGCGACACCGAT
CTAGAGGAGATGCTATCCGGGCTACACAAGACCGTGATCGTCCGTGGCGTCACCGAGAAG
GGTTCGGAAGCACTGGTGAGGAGCCCAGGAAGCTACAAGAGGGACGATGTCGTCCCGTCT
GAGACCCCCTTGGCTGCGTACACGACTGGTGAGCTGAAGGCCGACGAGATCATGCGGGCT
CTGAAGCAAGTCTCCAAGACTTCCAGCGGCATGTGAATTTGATGCTTCTTTTACATTTTG
TCCTTTTCTTCACTGCTATATAAAATAAGTTGTGAACAGTACCGCGGGTGTGTATATATA
TATTGCAGTGACAAATAAAACAGGACACTGCTAACTATACTGGTGAATATACGACTGTCA
AGATTGTATGCT