Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011984_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:8:165880855:165886284:-1 gene:Zm00001d011984 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy6b description:Beclin-1-like protein
Sequence	ATGAAGCCCACGGCCGGCGCCAGCGGCAAGGGCGGCGCCGTGTATCCTTCTCTGCCGCGG CTCAAGTGCCAGGAGTGCCGCCGTGCCCTCGTCGTCGTCGGGGTCGAGTCCTACGCCGAC AGGCTACCCGCACACGCCGCGCCCGGTAATCATGCATCTTCTGTTCAGGACAGTGTTATG GGTGCAAGCAAGATGGACAATTCTTATGTTGTGCTATCGAGGCAGAACAAAGTTCAGGGT CCTAGAATTCCCCCACGCCCAGGAAGTGCGGTGGCGGCACATACTGATCCCAACCAATCA ACAAGAGCGATAGAGGGGTCATATATAGTGCTACCACCTCCTTCCGCTTCCATATACAAG AAATCTGCCTCTGAAGGAGGTGGTGCGCAGCTCACACCACCAGGTGGAAACTCCAGTAGT CCCTTGTCGGGAAACAATTCTGGGTTTCACTCTAGTGTAACTGTGCTGAAAAGGGCTTTT GAGGTTGCTAGCTCACAAACTCAGGTTGAACAACCACTTTGTCTGGAATGTATGAGGGTT CTTTCTGATAAGATGGACAAGGAGATTGAAGATTGTAATGCTGATATTAAATCTTATGAG GCTTGTCTTCAACGTTTGCAGCAGGAACCCTACAACATCCTCAGTGAAACAGATTTTCAA AAGGAGAAACAAAAGGTGACCATTCCTATTGATATTGAGGAAGAGGAAAAGAAACTTAAA TGTGCTATTGAAGAAGCTGAAAAGCAATATTCTGAAGTTAGTTCTGAGATGAAAGATCTT GAAATAAAGTCTAAACAATTTGAGGAATTGGAAGAGCGGTACTGGCATGAATTCAACAGT TTTCAGTTTCAGTTGACATCTCATCAGGAAGAAAGAGACGCAGTTTTTGCCAAGATAGGA GTTTCTCAGGTTCATTTGGAAATGTTGAAGCATACTAATGTTCTCAATGATGCATTCTAT ATTTCATGTGATGAAGTAATTGCAAGAATAAATAACTTTCGCCTCGGACGCCTTCCTAAT GTAGAGGTTGAGTGGGATGAGATAAATGTTGCGTGGGGTCAGGCTGCACTTCTGTTGCAT ACCATGGCCCATTATTTCACTCCAAAATTCCGATACCGGATCAAGATTCACCCTATGGGA AGCTATCCAAGAGTCACAGACATCCACAATCATACATATGAACTGTTTGGTCCCGTGAAT TTGTTCTGGAGCACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCCTGCAAGAG TTCGCTGAGTTTGCCATAAGTCTGGATAAGGAGAACAATGTTCCACCTGAAAAAACACTG AAGCTTCCCCACAAGATCGATGGTGACAAAGTAGGGAACCACACGATCGTCCTAAGTTTC AATCAGGATGAAACCTGGACCAAGGCGCTCAAGTACATGCTGTACGATCTGAAGTTTGTT CTCTCCTGGTTTATTGGCAATACAAGTTTTGCGCCACCTTCGAGATCACTGCACACCCAA TTTCTGAAGAACAAGAGTTGA

Peptide Sequence

PEP ID	Zm00001d011984_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:8:165880855:165886284:-1 gene:Zm00001d011984 transcript:Zm00001d011984_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy6b description:Beclin-1-like protein
Sequence	MKPTAGASGKGGAVYPSLPRLKCQECRRALVVVGVESYADRLPAHAAPGNHASSVQDSVM GASKMDNSYVVLSRQNKVQGPRIPPRPGSAVAAHTDPNQSTRAIEGSYIVLPPPSASIYK KSASEGGGAQLTPPGGNSSSPLSGNNSGFHSSVTVLKRAFEVASSQTQVEQPLCLECMRV LSDKMDKEIEDCNADIKSYEACLQRLQQEPYNILSETDFQKEKQKVTIPIDIEEEEKKLK CAIEEAEKQYSEVSSEMKDLEIKSKQFEELEERYWHEFNSFQFQLTSHQEERDAVFAKIG VSQVHLEMLKHTNVLNDAFYISCDEVIARINNFRLGRLPNVEVEWDEINVAWGQAALLLH TMAHYFTPKFRYRIKIHPMGSYPRVTDIHNHTYELFGPVNLFWSTRFDKAMTWFLTCLQE FAEFAISLDKENNVPPEKTLKLPHKIDGDKVGNHTIVLSFNQDETWTKALKYMLYDLKFV LSWFIGNTSFAPPSRSLHTQFLKNKS

Transcript Sequence

Transcript ID	Zm00001d011984_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:165880855:165886284:-1 gene:Zm00001d011984 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy6b description:Beclin-1-like protein
Sequence	GCAGTGCTGGCGACTGGCGTGCTGCGTGCCTGCGGGGATACTCCGTCTCCTCCACCTCCA GTCCTCCTCCACGATCCCGCCTCCCCCACCTCTCGCCGGCCGACGACGACGACGATCCGC CGGCAGCAGCCCGCGCGCCGCAGATCTCCCGTTCGGTTCCTTGGAGCCGACAAGACGAGG GCAGCATGAAGCCCACGGCCGGCGCCAGCGGCAAGGGCGGCGCCGTGTATCCTTCTCTGC CGCGGCTCAAGTGCCAGGAGTGCCGCCGTGCCCTCGTCGTCGTCGGGGTCGAGTCCTACG CCGACAGGCTACCCGCACACGCCGCGCCCGGTAATCATGCATCTTCTGTTCAGGACAGTG TTATGGGTGCAAGCAAGATGGACAATTCTTATGTTGTGCTATCGAGGCAGAACAAAGTTC AGGGTCCTAGAATTCCCCCACGCCCAGGAAGTGCGGTGGCGGCACATACTGATCCCAACC AATCAACAAGAGCGATAGAGGGGTCATATATAGTGCTACCACCTCCTTCCGCTTCCATAT ACAAGAAATCTGCCTCTGAAGGAGGTGGTGCGCAGCTCACACCACCAGGTGGAAACTCCA GTAGTCCCTTGTCGGGAAACAATTCTGGGTTTCACTCTAGTGTAACTGTGCTGAAAAGGG CTTTTGAGGTTGCTAGCTCACAAACTCAGGTTGAACAACCACTTTGTCTGGAATGTATGA GGGTTCTTTCTGATAAGATGGACAAGGAGATTGAAGATTGTAATGCTGATATTAAATCTT ATGAGGCTTGTCTTCAACGTTTGCAGCAGGAACCCTACAACATCCTCAGTGAAACAGATT TTCAAAAGGAGAAACAAAAGGTGACCATTCCTATTGATATTGAGGAAGAGGAAAAGAAAC TTAAATGTGCTATTGAAGAAGCTGAAAAGCAATATTCTGAAGTTAGTTCTGAGATGAAAG ATCTTGAAATAAAGTCTAAACAATTTGAGGAATTGGAAGAGCGGTACTGGCATGAATTCA ACAGTTTTCAGTTTCAGTTGACATCTCATCAGGAAGAAAGAGACGCAGTTTTTGCCAAGA TAGGAGTTTCTCAGGTTCATTTGGAAATGTTGAAGCATACTAATGTTCTCAATGATGCAT TCTATATTTCATGTGATGAAGTAATTGCAAGAATAAATAACTTTCGCCTCGGACGCCTTC CTAATGTAGAGGTTGAGTGGGATGAGATAAATGTTGCGTGGGGTCAGGCTGCACTTCTGT TGCATACCATGGCCCATTATTTCACTCCAAAATTCCGATACCGGATCAAGATTCACCCTA TGGGAAGCTATCCAAGAGTCACAGACATCCACAATCATACATATGAACTGTTTGGTCCCG TGAATTTGTTCTGGAGCACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCCTGC AAGAGTTCGCTGAGTTTGCCATAAGTCTGGATAAGGAGAACAATGTTCCACCTGAAAAAA CACTGAAGCTTCCCCACAAGATCGATGGTGACAAAGTAGGGAACCACACGATCGTCCTAA GTTTCAATCAGGATGAAACCTGGACCAAGGCGCTCAAGTACATGCTGTACGATCTGAAGT TTGTTCTCTCCTGGTTTATTGGCAATACAAGTTTTGCGCCACCTTCGAGATCACTGCACA CCCAATTTCTGAAGAACAAGAGTTGATGTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGGGCATGTTTGGG AGCAAGAAGGGGATTTTAGCCCCTTCTCCAATCCTTTGGCTTAGTAACCAGGTTCCCGGA TCGATGGGATCGAGGAACGGGAACGTGGTACGCGGTACGCTACAAAAAGTAGGATTTAAC ACTACCGGAACGAGATTGTTCCCACGTTCCCGGAACGAGGAACGTGGCCAAGTTCCCAGT TCCCGGTTGTTCCCGGAACGAGGAACGTGGCCAAGTTCCCAGTTCCCGGTTACTAAGTCC TTTGGTCCCAAACATGTCGTGACTGTACATAGTTTATATACTTGACCCTAGCTAGCCGTT GGATGTAACCGTAGTGACAATGACGACATGTTTGATGTACATATGTTTACTGTACTATCT AAAGCTCAGCGACTCCATTTTCGCTGCGCTCT