Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011963_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:8:165266827:165275069:1 gene:Zm00001d011963 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent RNA helicase DHX8
Sequence	ATGCCATCCTTCTCTGCCGGCGCCTCATCGCAGAAGCAGCAGTTCGCGAGAGGGAGGCAG CTGATTCGACAACAGCGCAAGTCGCTCCCCATTGCGTCAGTGGAGAAAAGGCTAGTTGAG GAGGTGAGGAATAACGACACACTGATAATTGTTGGTGAGACTGGGAGTGGCAAAACTACT CAGCTTCCACAATTTTTGTATGATGGTGGGCTTTGTCAGGATGGTAAAGTCATTGGCATC ACTCAGCCTCGGAGAGTTGCAGCTGTTACAGTAGCAAAGCGTGTAGCGGAGGAATGCAAT GACCATATTGGCAAAAAGGTTGGATACTCCATCAGATTTGATGATTCCACATCCAATGCA ACAAGGATTAAATACATGACTGATGGTTTGCTTCTGAGGGAAGCACTTTTGGATCCACTC TTATCTAAGTACAGTGTTATAGTTGTTGATGAGGCTCATGAAAGAACTGTTCATACTGAT GTCTTGTTGGGTTTGTTGAAAAAAGTGCAACATTCCCGAGCTAATACCAATAAAAATGGG AAGACCTTGCTTGGGCATTCTCAAAATGTAACTATTAAGGAATGCCAAGGAATAAGATGT GCTCCACTAAAGCTGATAATTATGTCTGCTAGTTTGGATGCTAAGTGTTTTTCTGATTAT TTTGGTGGTGCTAAAGCTGTACATATTCAAGGTCGGCAATACCCGGTTGACATACTATAT ACTTATCAGCCTGAGTCGGATTATATGGATGCCACACTAGTTACTATCTTTCAGATCCAT TTGGAGGAAGGGCCTGGAGACATTCTGGCATTTCTAACTGGCCAAGAGGAGATTGAATCA CTGGAGAGACTTATTCATGAGCGTGCTCGTTTATTTCCACCAGAAAGTAGTAAGATATGT GTTACACCTATCTATTCATCTCTCCCGTCAGAACAGCAAATGAATGCTTTTAAGCCTGCA CCAGCTGGAACTCGCAAGGTAGTTCTAGCTACAAATATTGCTGAGACTTCAGTAACAATA CCTGGCATCAAATATGTTATAGATCCTGGGATGGTAAAAGCTCGTGCTTACAATCCTGTG ACTGGAATGGAATCACTAATCATTATTCCAGTCTCTAAAGCGCAGGCTCTTCAAAGGAGT GGTCGTGCTGGACGTGAGGGACCAGGGAAGTGCTTCCGATTGTTCCAAGAAAGTGAGTTT GATAAGCTGGTGGATTCTACTGTGCCTGAGATTAAGCGGTGTAACCTCTCAAATGTTGTT CTGCAACTCAAGGCTCTTGGAATTGATGACATCATAGGTTTTGATTTTATGGAGAAACCA TCAAGGACTGATGATTATAAGCTCTCAGATCCAGTTGGTCATCAGATGGCTAGGCTACCT TTGGATCCAATGTACTCTAAGTCATTAATAGTATCAAGCAAATTCAAGTGCTTGGAAGAA ATGCTCATTGTTGTATCTATGCTTTCGGTGGAATCAATTTTCTTCTCCGTGCGTGAGAAG TTAGAAGAGGCAAGAGCTGCCAGGAAGAGATTCGAAAGCTCCGAAGGAGACCATATCACA TTGGTGAATGTCTATCGAGGAGCTGCAGAATGCTTGGAGAAGAGCAGAAATGCAAATGCC AAAGAAAAAACAATGGAAAAGGCTCTGAACAGGTGGTGCAGAGAAAACTTCATCAACTAC CGCTCTCTAAGACATGCTCGCGATGTTCACAGACAAATTCAGGGCCATGTCCAACAAATG GGGCTGAGCATGTCGTCATGTGGAGATGACATGGTTCTGTTTCGGAGATGCCTTACGTCT GCCTTCTTCTTGAATGCAGCGATGCGACAGCCAGATGGTTCATACAGGGCCCTTGCAACT GGCCAGAGCGTGCAGATCCACCCTTCATCTGTGCTTTTCAGGACCAAGGTCGACTGTGTC ATCTTCAACGAGCTAGTTCGGACGACACAGAACTATATCAAGAACCTGACCCGTATTGAC CCCTTGTGGCTGGCTGAGCTCGCCCCGCAGTACTACGCTACCGAAGAGTAA

Peptide Sequence

PEP ID	Zm00001d011963_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:8:165266827:165275069:1 gene:Zm00001d011963 transcript:Zm00001d011963_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent RNA helicase DHX8
Sequence	MPSFSAGASSQKQQFARGRQLIRQQRKSLPIASVEKRLVEEVRNNDTLIIVGETGSGKTT QLPQFLYDGGLCQDGKVIGITQPRRVAAVTVAKRVAEECNDHIGKKVGYSIRFDDSTSNA TRIKYMTDGLLLREALLDPLLSKYSVIVVDEAHERTVHTDVLLGLLKKVQHSRANTNKNG KTLLGHSQNVTIKECQGIRCAPLKLIIMSASLDAKCFSDYFGGAKAVHIQGRQYPVDILY TYQPESDYMDATLVTIFQIHLEEGPGDILAFLTGQEEIESLERLIHERARLFPPESSKIC VTPIYSSLPSEQQMNAFKPAPAGTRKVVLATNIAETSVTIPGIKYVIDPGMVKARAYNPV TGMESLIIIPVSKAQALQRSGRAGREGPGKCFRLFQESEFDKLVDSTVPEIKRCNLSNVV LQLKALGIDDIIGFDFMEKPSRTDDYKLSDPVGHQMARLPLDPMYSKSLIVSSKFKCLEE MLIVVSMLSVESIFFSVREKLEEARAARKRFESSEGDHITLVNVYRGAAECLEKSRNANA KEKTMEKALNRWCRENFINYRSLRHARDVHRQIQGHVQQMGLSMSSCGDDMVLFRRCLTS AFFLNAAMRQPDGSYRALATGQSVQIHPSSVLFRTKVDCVIFNELVRTTQNYIKNLTRID PLWLAELAPQYYATEE

Transcript Sequence

Transcript ID	Zm00001d011963_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:165266827:165275069:1 gene:Zm00001d011963 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent RNA helicase DHX8
Sequence	GTTGCGGCAGTGAACCCGTCTCCCCCAGACGCGCAGCACCAAAAACCCTACCACCAATTC TAGACCCTCCCGGCTCTAGCTTCCCCACACTCCGTCGCGGGCTCGTGGGCTCCGGCGGTG GCTAGATTCAGGGTGCGGGAGTCGGCGTCGTCGTCCGAGATGCCATCCTTCTCTGCCGGC GCCTCATCGCAGAAGCAGCAGTTCGCGAGAGGGAGGCAGCTGATTCGACAACAGCGCAAG TCGCTCCCCATTGCGTCAGTGGAGAAAAGGCTAGTTGAGGAGGTGAGGAATAACGACACA CTGATAATTGTTGGTGAGACTGGGAGTGGCAAAACTACTCAGCTTCCACAATTTTTGTAT GATGGTGGGCTTTGTCAGGATGGTAAAGTCATTGGCATCACTCAGCCTCGGAGAGTTGCA GCTGTTACAGTAGCAAAGCGTGTAGCGGAGGAATGCAATGACCATATTGGCAAAAAGGTT GGATACTCCATCAGATTTGATGATTCCACATCCAATGCAACAAGGATTAAATACATGACT GATGGTTTGCTTCTGAGGGAAGCACTTTTGGATCCACTCTTATCTAAGTACAGTGTTATA GTTGTTGATGAGGCTCATGAAAGAACTGTTCATACTGATGTCTTGTTGGGTTTGTTGAAA AAAGTGCAACATTCCCGAGCTAATACCAATAAAAATGGGAAGACCTTGCTTGGGCATTCT CAAAATGTAACTATTAAGGAATGCCAAGGAATAAGATGTGCTCCACTAAAGCTGATAATT ATGTCTGCTAGTTTGGATGCTAAGTGTTTTTCTGATTATTTTGGTGGTGCTAAAGCTGTA CATATTCAAGGTCGGCAATACCCGGTTGACATACTATATACTTATCAGCCTGAGTCGGAT TATATGGATGCCACACTAGTTACTATCTTTCAGATCCATTTGGAGGAAGGGCCTGGAGAC ATTCTGGCATTTCTAACTGGCCAAGAGGAGATTGAATCACTGGAGAGACTTATTCATGAG CGTGCTCGTTTATTTCCACCAGAAAGTAGTAAGATATGTGTTACACCTATCTATTCATCT CTCCCGTCAGAACAGCAAATGAATGCTTTTAAGCCTGCACCAGCTGGAACTCGCAAGGTA GTTCTAGCTACAAATATTGCTGAGACTTCAGTAACAATACCTGGCATCAAATATGTTATA GATCCTGGGATGGTAAAAGCTCGTGCTTACAATCCTGTGACTGGAATGGAATCACTAATC ATTATTCCAGTCTCTAAAGCGCAGGCTCTTCAAAGGAGTGGTCGTGCTGGACGTGAGGGA CCAGGGAAGTGCTTCCGATTGTTCCAAGAAAGTGAGTTTGATAAGCTGGTGGATTCTACT GTGCCTGAGATTAAGCGGTGTAACCTCTCAAATGTTGTTCTGCAACTCAAGGCTCTTGGA ATTGATGACATCATAGGTTTTGATTTTATGGAGAAACCATCAAGGACTGATGATTATAAG CTCTCAGATCCAGTTGGTCATCAGATGGCTAGGCTACCTTTGGATCCAATGTACTCTAAG TCATTAATAGTATCAAGCAAATTCAAGTGCTTGGAAGAAATGCTCATTGTTGTATCTATG CTTTCGGTGGAATCAATTTTCTTCTCCGTGCGTGAGAAGTTAGAAGAGGCAAGAGCTGCC AGGAAGAGATTCGAAAGCTCCGAAGGAGACCATATCACATTGGTGAATGTCTATCGAGGA GCTGCAGAATGCTTGGAGAAGAGCAGAAATGCAAATGCCAAAGAAAAAACAATGGAAAAG GCTCTGAACAGGTGGTGCAGAGAAAACTTCATCAACTACCGCTCTCTAAGACATGCTCGC GATGTTCACAGACAAATTCAGGGCCATGTCCAACAAATGGGGCTGAGCATGTCGTCATGT GGAGATGACATGGTTCTGTTTCGGAGATGCCTTACGTCTGCCTTCTTCTTGAATGCAGCG ATGCGACAGCCAGATGGTTCATACAGGGCCCTTGCAACTGGCCAGAGCGTGCAGATCCAC CCTTCATCTGTGCTTTTCAGGACCAAGGTCGACTGTGTCATCTTCAACGAGCTAGTTCGG ACGACACAGAACTATATCAAGAACCTGACCCGTATTGACCCCTTGTGGCTGGCTGAGCTC GCCCCGCAGTACTACGCTACCGAAGAGTAATTGTGATCAGTGGACATTGGGCACAACAGT AATACTTTATGGTGATGACGAATTATTTATATTTATGCAATTCGTTATTATATTAAAGTA TGGTGCTATTGCCGAGGAGTTTCTAGGGGGTAGATGAAAAAAATTTAAGAGATGGGCTAT TCGTAAAGAGCCCGTTTTTACGATTCCCTATATTTATTGTGTCTTGACTGTATTTATGAT GTAGAGTCTCGAGGTTGTTTC