Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011956_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:8:165140548:165154997:-1 gene:Zm00001d011956 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene118 description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH4
Sequence	ATGGCGAATATGGATTCGGTTGTTGTGATGGAGGTGGCGCCGGTGCCGATCCCGACGTTC ATGGACGCCACTCCCCTGAACCCCCCACTGCCGCTTGTGGTGGAGGAGCTCGTGCTGCGC CGCAGTGCTCGTTACCTCAACAGGCCAACCCGGCCTAACTACGCGGACCAGGAGCCTCCA AAAAACCCCGGCGGCCGGGGCCGGGGCAAGCGAAAGAGGGATGAGGAGAAGCCGGAGCTG GCGGCGCAGCAGGGTACCAAGACCCCAGGCAGGAATGACTCCAATGTTGAGGCGGGTGAG AGGAAGCCGATGCCCGTGACTGCGGCGGTGCCGGCCTGTTGCGCTGGCGTTGCTGCGGAA GACGATGCGACGCCGACTGGGAAGAGCGCCAAGCTGAGGGTGAAGGAGACACTGAGGGCG TTCAACAGCCACTACCTCCACTTTGTCCAGGAGGAGCAGAAAAGAGCTCAGGCTGCGATA CAGGAGATTGAGGCTAAGGGTGGCCTCAAACGTCAGACCAAGGGGGGTAAAAAGAAACGC CCATCAAAGCGACCTGACCTGAAGGCAATCACCAAGATGCAAGAAATGAATGCCGTGCTT TATCAGGAGAAGACGATTGGGCATCTACCAGGGCTCGATGTCGGAGATCAGTTTTATTCT CGCGCTGAAATGGTAGTGTTGGGCATCCACAGCCATTGGCTCAATGGCATTGACTATATG GGGATGAAATACCAAGGAAAGGAGTATGCCAACTTAACTTTCCCATTGGCCACATGTATT GTAATGTCGGGGATATATGAAGATGATCTAGACAAGGCTGATGAAATTATTTATACTGGT CAAGGAGGAAATGATTTACTTGGTAACCACCGCCAAATTGGCTCTCAACAGTTGAAACGT GGGAATTTAGCATTGAAGAATAGCAGGAAGAATGGTAATCCTGTCCGAGTTATTCGAGGT CATTTATCAAAGAATAGCTATACTGGAAAGGTCTACACCTACGATGGGCTTTACAAGGTT GTAGATGACTGGGTGCAGAACGGTGTGCAAGGCCATGTTGTTTTCAAATTTAAGTTGAAG CGGCTTGAGGGTCAGCCATCATTGACAACTTCTGAGGTGCGATTTACTCGTGCAGAAGCT CCGACAACTATTTCTGAATTACCTGGACTGGTTTGTGACGATATCTCTGGAGGGCAAGAA AACATTCCGATTCCTGCCACTAACTTGGTTGATGATCCACCTGTTCCTCCATCTGGTTTC ACATACTTGAAGTCTCTAAAAATTCCAAAGGACATCAAGATCCCATCTAGTATTATTGGC TGTGATTGTGAAGGAGATTGTGCTAGCAACAAAAATTGTTCATGTGCTCAGCGCAATGGT TCTGATCTGCCTTATGTATCATATAAGAACATTGGCAGGTTGGTGGAGCCCAAAGCAGTT GTATTTGAATGCGGGGCTAACTGCAGCTGCAACCATGATTGTGTAAACAGAACATCTCAA CAGGGTTTGCAGTATCACTTAGAGGTATTTAAGACAGCTTCAAAAGGTTGGGGAGTCAGG ACTTGGGACACTATCCTCCCTGGGGCTCCCATCTGTGAGTACACGGGGGTGTTGAGGAGG ACTGAAGATCTGGATGGTTCACAGAACAACTATTGTTTTGACATTGATTGTCTTCAAACC ATGAAAGGTTTGGATGGAAGGGAGAAAAGAGCTGGATCTGAAATGCACCTGCCTAATCTT TATCCAGAGAATGACTCAGATGCACCACCTGCACCTGAGTACTGCATAGACGGCAGTTCC ATTGGCAATTTTGCAAGATTTATAAATCATAGTTGCCAACCTAACCTTTTCGTCCAGTGC GTCATGAGCTCACACAACGATGTTAAACTAGCAAAAGTGATGCTTTTTGCTGCTGACACA ATACTTCCTCTTCAGGAGCTATCCTATGACTACGGTTATCGCTTGGACAGTGTTGTTGGG CCTGATGGTAAAATTGTGAAGCTGCCATGCCACTGTGGTGCTCCAGATTGCCGGAAGCGC CTCTACTAG

Peptide Sequence

PEP ID	Zm00001d011956_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:8:165140548:165154997:-1 gene:Zm00001d011956 transcript:Zm00001d011956_T012 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene118 description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH4
Sequence	MANMDSVVVMEVAPVPIPTFMDATPLNPPLPLVVEELVLRRSARYLNRPTRPNYADQEPP KNPGGRGRGKRKRDEEKPELAAQQGTKTPGRNDSNVEAGERKPMPVTAAVPACCAGVAAE DDATPTGKSAKLRVKETLRAFNSHYLHFVQEEQKRAQAAIQEIEAKGGLKRQTKGGKKKR PSKRPDLKAITKMQEMNAVLYQEKTIGHLPGLDVGDQFYSRAEMVVLGIHSHWLNGIDYM GMKYQGKEYANLTFPLATCIVMSGIYEDDLDKADEIIYTGQGGNDLLGNHRQIGSQQLKR GNLALKNSRKNGNPVRVIRGHLSKNSYTGKVYTYDGLYKVVDDWVQNGVQGHVVFKFKLK RLEGQPSLTTSEVRFTRAEAPTTISELPGLVCDDISGGQENIPIPATNLVDDPPVPPSGF TYLKSLKIPKDIKIPSSIIGCDCEGDCASNKNCSCAQRNGSDLPYVSYKNIGRLVEPKAV VFECGANCSCNHDCVNRTSQQGLQYHLEVFKTASKGWGVRTWDTILPGAPICEYTGVLRR TEDLDGSQNNYCFDIDCLQTMKGLDGREKRAGSEMHLPNLYPENDSDAPPAPEYCIDGSS IGNFARFINHSCQPNLFVQCVMSSHNDVKLAKVMLFAADTILPLQELSYDYGYRLDSVVG PDGKIVKLPCHCGAPDCRKRLY

Transcript Sequence

Transcript ID	Zm00001d011956_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:165140548:165154997:-1 gene:Zm00001d011956 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene118 description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH4
Sequence	GCTCTGCTCTCGACGCTTTGCTCTCCTCCCTTCCCCACCCGCCCACCCGGACTTGGTTCT TCCGCCATTCCCGTTATCGCGGAGCGCAGCTGGTGGATGGCGAATATGGATTCGGTTGTT GTGATGGAGGTGGCGCCGGTGCCGATCCCGACGTTCATGGACGCCACTCCCCTGAACCCC CCACTGCCGCTTGTGGTGGAGGAGCTCGTGCTGCGCCGCAGTGCTCGTTACCTCAACAGG CCAACCCGGCCTAACTACGCGGACCAGGAGCCTCCAAAAAACCCCGGCGGCCGGGGCCGG GGCAAGCGAAAGAGGGATGAGGAGAAGCCGGAGCTGGCGGCGCAGCAGGGTACCAAGACC CCAGGCAGGAATGACTCCAATGTTGAGGCGGGTGAGAGGAAGCCGATGCCCGTGACTGCG GCGGTGCCGGCCTGTTGCGCTGGCGTTGCTGCGGAAGACGATGCGACGCCGACTGGGAAG AGCGCCAAGCTGAGGGTGAAGGAGACACTGAGGGCGTTCAACAGCCACTACCTCCACTTT GTCCAGGAGGAGCAGAAAAGAGCTCAGGCTGCGATACAGGAGATTGAGGCTAAGGGTGGC CTCAAACGTCAGACCAAGGGGGGTAAAAAGAAACGCCCATCAAAGCGACCTGACCTGAAG GCAATCACCAAGATGCAAGAAATGAATGCCGTGCTTTATCAGGAGAAGACGATTGGGCAT CTACCAGGGCTCGATGTCGGAGATCAGTTTTATTCTCGCGCTGAAATGGTAGTGTTGGGC ATCCACAGCCATTGGCTCAATGGCATTGACTATATGGGGATGAAATACCAAGGAAAGGAG TATGCCAACTTAACTTTCCCATTGGCCACATGTATTGTAATGTCGGGGATATATGAAGAT GATCTAGACAAGGCTGATGAAATTATTTATACTGGTCAAGGAGGAAATGATTTACTTGGT AACCACCGCCAAATTGGCTCTCAACAGTTGAAACGTGGGAATTTAGCATTGAAGAATAGC AGGAAGAATGGTAATCCTGTCCGAGTTATTCGAGGTCATTTATCAAAGAATAGCTATACT GGAAAGGTCTACACCTACGATGGGCTTTACAAGGTTGTAGATGACTGGGTGCAGAACGGT GTGCAAGGCCATGTTGTTTTCAAATTTAAGTTGAAGCGGCTTGAGGGTCAGCCATCATTG ACAACTTCTGAGGTGCGATTTACTCGTGCAGAAGCTCCGACAACTATTTCTGAATTACCT GGACTGGTTTGTGACGATATCTCTGGAGGGCAAGAAAACATTCCGATTCCTGCCACTAAC TTGGTTGATGATCCACCTGTTCCTCCATCTGGTTTCACATACTTGAAGTCTCTAAAAATT CCAAAGGACATCAAGATCCCATCTAGTATTATTGGCTGTGATTGTGAAGGAGATTGTGCT AGCAACAAAAATTGTTCATGTGCTCAGCGCAATGGTTCTGATCTGCCTTATGTATCATAT AAGAACATTGGCAGGTTGGTGGAGCCCAAAGCAGTTGTATTTGAATGCGGGGCTAACTGC AGCTGCAACCATGATTGTGTAAACAGAACATCTCAACAGGGTTTGCAGTATCACTTAGAG GTATTTAAGACAGCTTCAAAAGGTTGGGGAGTCAGGACTTGGGACACTATCCTCCCTGGG GCTCCCATCTGTGAGTACACGGGGGTGTTGAGGAGGACTGAAGATCTGGATGGTTCACAG AACAACTATTGTTTTGACATTGATTGTCTTCAAACCATGAAAGGTTTGGATGGAAGGGAG AAAAGAGCTGGATCTGAAATGCACCTGCCTAATCTTTATCCAGAGAATGACTCAGATGCA CCACCTGCACCTGAGTACTGCATAGACGGCAGTTCCATTGGCAATTTTGCAAGATTTATA AATCATAGTTGCCAACCTAACCTTTTCGTCCAGTGCGTCATGAGCTCACACAACGATGTT AAACTAGCAAAAGTGATGCTTTTTGCTGCTGACACAATACTTCCTCTTCAGGAGCTATCC TATGACTACGGTTATCGCTTGGACAGTGTTGTTGGGCCTGATGGTAAAATTGTGAAGCTG CCATGCCACTGTGGTGCTCCAGATTGCCGGAAGCGCCTCTACTAGACCTGCAGTGTGTTT CCATTTTGATTTTGCAGGAAACAACCTATATTGTAGGAAAGCATTCATGTTATTTATGTA GTTGGCATGCTCTGATATATAGCGAAAGAGGAGCAACTTA