Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011953_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:8:164991680:164996225:-1 gene:Zm00001d011953 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 25 description:Auxin response factor 2
Sequence	ATGCCGCCCGCAGCCATGGCGCTGCCGTCCCAGGCCCCGTCTAACTCAGGGGATCCGCTG TACCCGGAGCTCTGGCGCGCCTGCGCCGGCCCGCTCGTCACCGTCCCCCGCGTCGGCGAC CTCGTCTTCTACTTCCCCCAGGGACACATCGAGCAGGTGGAGGCGTCCATGAACCAGGTT GCCGGGAACCCGATGCGTCTCTACGATCTGCCTTCCAAGCTGCTCTGCCGCGTGCTCAAC GTCGAGCTGAAGGCGGAGACCGACACCGACGAGGTGTACGCGCAGATCATGCTCATGCCG GAGCCCGAGCAAAACGATGTGGCTGCCGAGAAGACGAGCTCTGGGTCTGCTGCGCCACCG AGGCCAGCGGTCAGGTCATTCTGCAAGACGCTCACCGCCTCCGACACCAGCACACACGGC GGCTTCTCTGTCCTGCGCCGCCACGCTGACGAGTGCCTCCCTGCCCTGGATATGTCCCAG TCGCCTCCCACTCAGGAGCTGGTGGCGAAGGATCTGCATGGCATGGAGTGGCGATTCCGC CACATCTTCCGCGGGCAACCCAGGAGGCATCTCCTTCAGAGTGGTTGGAGTGTTTTTGTC AGTTCCAAAAGGCTTGTTGCTGGAGACGCCTTCATTTTCCTCAGAGGAGAAAACGGTGAA CTTCGAGTTGGTGTTAGGCGCGCTATGAGGCAGTTGTCTAATGTACCTTCTTCGGTTATA TCTAGCCAAAGCATGCATCTCGGGGTTCTTGCGACTGCATGGCACGCTATTAACACAAAG TCCATGTTCACTGTCTACTACAAACCTAGGACGAGCCCTTCAGAGTTCATCATTCCATAT GATCAATATATGGAGTCAGTAAAAAACAATTATTCTATTGGGATGAGATTCAGGATGAGG TTTGAAGGGGAAGAGGCCCCCGAGCAGAGGTTTACTGGTACAATAGTTGGCTGTGAAAAT CTTGACCCACTATGGCCTGATTCCAGTTGGAGATACTTGAAGGTGCGCTGGGATGAGCCT TCTACTATCCCGCGGCCAGATAAGGTCTCTCCCTGGAAGATAGAGCCTGCTTCATCACCT CCTGTTAATCCTCTCCCTCTTTCTAGAGGAAAAAGACCTAGACAAAATGCACCTCCACCT TCCCCTGAATCATCTGTTCTCACAAAAGAAGGTGCAACCAAGATTGATACTGATTCTGCT CAAACACCACATCAAAATTCGGTCTTGCAAAGTCAAGAGCAGATGAGCTTTAGGAACAAC CTGACTGAAAGCACCGACTCTGATTCCACTGTTCAGAAGCAGATGATGTGGTCCCCATCA CCCAATGGGAAAGTTCACACTAATTTTCAGCCGAGACCTGCTATGGATAACTGGATGCCA TTGGGAAGGCGTGAAACTGACTTCAAGGACACCCGTTCTGCCTTCAAGGATGCCCGCACC GCTTCTCAATCGTTTGGAGATACACAGGGGTTCTTTATGCAAGCTTATGATGACAGTCGT CACCGTCTTTCTTTCAACAATCAGTTTCAAGATCAGGGTTCAGCTCATCGCTTTGCAGAT CCATACTTCTATATGCCTCAACAACCTTCTCTGACGGTTGAATCAGGCACAAGGACGCAA ACAGCGAACAATGACTTGCGTTTTTGGAGTGAGCGGAATTCGATGTATGGTAATCCAAGT GACCAACAGCAGGGTTTCAGCTTTGGGCAAAACACATCAAGTTGGTTGAACCAGCCACTT CCCCAGGTTGAACAGTCACGAGTGGTCAGGCCGCATGCAACGGTTGCTCCATTTGATTTA GAGAAGACTAGAGAAGGCAGTGGGTTCAAAATATTTGGTTTCCAAGTTGATACAACCAAT CCATCACCTGTCCAATTGAGCTCTCCATTGTCTGCTATCCGAGAGCATGTGGTACAAACT CGACCATCGGCACCAGTGAATGAATTGCAACCTGTGCAAATTGAGTGCTTGCCTGAGGTG TCCGTAAGCACAGCTGGAACTGCAGCTGAGAACATTCAGCAAGTCCAGCAAAGTTCGAAA GATATTCAAAGCAAGTCCCAGGGCGCTTCAACAAGGAGCTGTACAAAGGTTCATAAGCAA GGAGTTGCGCTTGGCCGGTCCGTGGACCTCTCTAAATTCACCGACTACGGTGAGCTCAAA GCGGAACTAGACAAGATGTTTGAGTTCGAGGGCGAATTGGTATCTGCTAACCGGAACTGG CAGATCGTTTATACCGACAACGAGGGTGATATGATGCTTGTCGGAGATGACCCGTGGGAG GAGTTCTGCAACATAGTGCGCAAGATCTACATCTACACGAAGGAGGAGGTCCAGAAGATG AACTCGAAATCATCCGTGCCGAGGAAGGAGGAACCCCCAGCAGCAGGCGAAGGCTGCGCC GCCGCCGCCGCAAACGAGTAG

Peptide Sequence

PEP ID	Zm00001d011953_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:8:164991680:164996225:-1 gene:Zm00001d011953 transcript:Zm00001d011953_T009 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 25 description:Auxin response factor 2
Sequence	MPPAAMALPSQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQV AGNPMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPP RPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFR HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVI SSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMR FEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSP PVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRNN LTESTDSDSTVQKQMMWSPSPNGKVHTNFQPRPAMDNWMPLGRRETDFKDTRSAFKDART ASQSFGDTQGFFMQAYDDSRHRLSFNNQFQDQGSAHRFADPYFYMPQQPSLTVESGTRTQ TANNDLRFWSERNSMYGNPSDQQQGFSFGQNTSSWLNQPLPQVEQSRVVRPHATVAPFDL EKTREGSGFKIFGFQVDTTNPSPVQLSSPLSAIREHVVQTRPSAPVNELQPVQIECLPEV SVSTAGTAAENIQQVQQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELK AELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRKIYIYTKEEVQKM NSKSSVPRKEEPPAAGEGCAAAAANE

Transcript Sequence

Transcript ID	Zm00001d011953_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:164991680:164996225:-1 gene:Zm00001d011953 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 25 description:Auxin response factor 2
Sequence	CCCGCACAAAAACATTTGCCCCCCACCCGACTGCTACTGCCGCTGCCTCCTCTCCCTTTC CGCCTGCCTTCGCTCTCCTCGTCGTCTCCTCCGTCTAGGGTTCTCCACCCCACCCGCCCC GCCGCCGCCCGATCCGAGGCAGATGCCGCCCGCAGCCATGGCGCTGCCGTCCCAGGCCCC GTCTAACTCAGGGGATCCGCTGTACCCGGAGCTCTGGCGCGCCTGCGCCGGCCCGCTCGT CACCGTCCCCCGCGTCGGCGACCTCGTCTTCTACTTCCCCCAGGGACACATCGAGCAGGT GGAGGCGTCCATGAACCAGGTTGCCGGGAACCCGATGCGTCTCTACGATCTGCCTTCCAA GCTGCTCTGCCGCGTGCTCAACGTCGAGCTGAAGGCGGAGACCGACACCGACGAGGTGTA CGCGCAGATCATGCTCATGCCGGAGCCCGAGCAAAACGATGTGGCTGCCGAGAAGACGAG CTCTGGGTCTGCTGCGCCACCGAGGCCAGCGGTCAGGTCATTCTGCAAGACGCTCACCGC CTCCGACACCAGCACACACGGCGGCTTCTCTGTCCTGCGCCGCCACGCTGACGAGTGCCT CCCTGCCCTGGATATGTCCCAGTCGCCTCCCACTCAGGAGCTGGTGGCGAAGGATCTGCA TGGCATGGAGTGGCGATTCCGCCACATCTTCCGCGGGCAACCCAGGAGGCATCTCCTTCA GAGTGGTTGGAGTGTTTTTGTCAGTTCCAAAAGGCTTGTTGCTGGAGACGCCTTCATTTT CCTCAGAGGAGAAAACGGTGAACTTCGAGTTGGTGTTAGGCGCGCTATGAGGCAGTTGTC TAATGTACCTTCTTCGGTTATATCTAGCCAAAGCATGCATCTCGGGGTTCTTGCGACTGC ATGGCACGCTATTAACACAAAGTCCATGTTCACTGTCTACTACAAACCTAGGACGAGCCC TTCAGAGTTCATCATTCCATATGATCAATATATGGAGTCAGTAAAAAACAATTATTCTAT TGGGATGAGATTCAGGATGAGGTTTGAAGGGGAAGAGGCCCCCGAGCAGAGGTTTACTGG TACAATAGTTGGCTGTGAAAATCTTGACCCACTATGGCCTGATTCCAGTTGGAGATACTT GAAGGTGCGCTGGGATGAGCCTTCTACTATCCCGCGGCCAGATAAGGTCTCTCCCTGGAA GATAGAGCCTGCTTCATCACCTCCTGTTAATCCTCTCCCTCTTTCTAGAGGAAAAAGACC TAGACAAAATGCACCTCCACCTTCCCCTGAATCATCTGTTCTCACAAAAGAAGGTGCAAC CAAGATTGATACTGATTCTGCTCAAACACCACATCAAAATTCGGTCTTGCAAAGTCAAGA GCAGATGAGCTTTAGGAACAACCTGACTGAAAGCACCGACTCTGATTCCACTGTTCAGAA GCAGATGATGTGGTCCCCATCACCCAATGGGAAAGTTCACACTAATTTTCAGCCGAGACC TGCTATGGATAACTGGATGCCATTGGGAAGGCGTGAAACTGACTTCAAGGACACCCGTTC TGCCTTCAAGGATGCCCGCACCGCTTCTCAATCGTTTGGAGATACACAGGGGTTCTTTAT GCAAGCTTATGATGACAGTCGTCACCGTCTTTCTTTCAACAATCAGTTTCAAGATCAGGG TTCAGCTCATCGCTTTGCAGATCCATACTTCTATATGCCTCAACAACCTTCTCTGACGGT TGAATCAGGCACAAGGACGCAAACAGCGAACAATGACTTGCGTTTTTGGAGTGAGCGGAA TTCGATGTATGGTAATCCAAGTGACCAACAGCAGGGTTTCAGCTTTGGGCAAAACACATC AAGTTGGTTGAACCAGCCACTTCCCCAGGTTGAACAGTCACGAGTGGTCAGGCCGCATGC AACGGTTGCTCCATTTGATTTAGAGAAGACTAGAGAAGGCAGTGGGTTCAAAATATTTGG TTTCCAAGTTGATACAACCAATCCATCACCTGTCCAATTGAGCTCTCCATTGTCTGCTAT CCGAGAGCATGTGGTACAAACTCGACCATCGGCACCAGTGAATGAATTGCAACCTGTGCA AATTGAGTGCTTGCCTGAGGTGTCCGTAAGCACAGCTGGAACTGCAGCTGAGAACATTCA GCAAGTCCAGCAAAGTTCGAAAGATATTCAAAGCAAGTCCCAGGGCGCTTCAACAAGGAG CTGTACAAAGGTTCATAAGCAAGGAGTTGCGCTTGGCCGGTCCGTGGACCTCTCTAAATT CACCGACTACGGTGAGCTCAAAGCGGAACTAGACAAGATGTTTGAGTTCGAGGGCGAATT GGTATCTGCTAACCGGAACTGGCAGATCGTTTATACCGACAACGAGGGTGATATGATGCT TGTCGGAGATGACCCGTGGGAGGAGTTCTGCAACATAGTGCGCAAGATCTACATCTACAC GAAGGAGGAGGTCCAGAAGATGAACTCGAAATCATCCGTGCCGAGGAAGGAGGAACCCCC AGCAGCAGGCGAAGGCTGCGCCGCCGCCGCCGCAAACGAGTAGGATGTCTGCCTGCACTG CAGCAAG