Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011945_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:8:164894308:164898870:-1 gene:Zm00001d011945 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin chaperone subunit family protein
Sequence

ATGGCTGCGCCGAGGAAGGGGACGGCGACGCCGCTGGGCACCGTGTTCTCGCCGGAGGAG
ACGAAGAGGGCCGTGGCGAGGGTGGCCGAGTCCGTCGCTGGGCGCCGCGCCGAGCTCGCC
CGCCTCCAGGGTTTCGCCGCCGACAACGCCGCCCTCGTCTCCCTCGTCAACAGGCTCCCC
GACGAACTCTCTCACGATATCATGGTTCCCTTTGGTGGCGCCGCCTTTTTCCCAGGGCGT
TTAATACACACAAATGAACTCTTGGTGCTTCTGGGTGAGGGGTACTATGCAGAGAGGTCG
GCTAAGCAGACGACTAATATATTGCACAGGAGGGGGCAGGAATTGGAAGCTCAAGTCGAA
GCAATGAAGGCAACTATCGCTGACCTTGAAGCTGAGGCCAAATTCTTTGAATTCACGGCC
ACCGAGGCTTCAGAGGGTCTTGTTGAAATCAGGGAAGAGTATGATGAGGACTTAGAGACG
AATTCATCAAGATCAGAGGCTTCAGTTGCTACTGTGGTTATGTCCGATAAAGACAGGGAA
CATGCTCGAATCATGGCAAGGTTAGATGAACTTGAAAGGGAAGAAAAGGATGCTGGAAGT
GCCTGTGAAGATGATAATGATGGCGACGATGATGATGGAGATGCTGGAACAAGTGATGAT
GGCGAGGAAAATAAGGAATCTGGAAATGCTTTAAGTGATGTCAATGAAGACTACAGTTCT
GGTTTTGGCGCTTCATTTTCTGGAAGTGGCGGCAATGATAGGAGTCATGGGAATATTAAG
GCAACAAATTCTGATGTCCGAGTTCACACTAAAGCTGTTACTTTTGAAGACGACAAATAT
GTAGTTAGTTCGTCAAAGTCTCCTCCCTTGCTACTGGATTCTATACAGTCTGATCCTGTG
CTCAAGAATTCTTCAGACCCCGCTCTATCTCGTGACAGAAAGATAATATCAAGTGGACGA
AAGGCCTTTACAGGATCTATCATTGAGCACGACGACAATGTTTCCACCATTGAACCTTCT
GTGGCTAGTTCGTTGGCAAAACCTGGTACTTGTGCTTCTTCAAGGCCCGTGTCAAGGTTC
AAGATGCAGAAAGGAGGGCGGTGA

Peptide Sequence

PEP ID

Zm00001d011945_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:8:164894308:164898870:-1 gene:Zm00001d011945 transcript:Zm00001d011945_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin chaperone subunit family protein
Sequence

MAAPRKGTATPLGTVFSPEETKRAVARVAESVAGRRAELARLQGFAADNAALVSLVNRLP
DELSHDIMVPFGGAAFFPGRLIHTNELLVLLGEGYYAERSAKQTTNILHRRGQELEAQVE
AMKATIADLEAEAKFFEFTATEASEGLVEIREEYDEDLETNSSRSEASVATVVMSDKDRE
HARIMARLDELEREEKDAGSACEDDNDGDDDDGDAGTSDDGEENKESGNALSDVNEDYSS
GFGASFSGSGGNDRSHGNIKATNSDVRVHTKAVTFEDDKYVVSSSKSPPLLLDSIQSDPV
LKNSSDPALSRDRKIISSGRKAFTGSIIEHDDNVSTIEPSVASSLAKPGTCASSRPVSRF
KMQKGGR

Transcript Sequence

Transcript ID

Zm00001d011945_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:164894308:164898870:-1 gene:Zm00001d011945 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin chaperone subunit family protein
Sequence

GGAGCTCCCAGTCCGCAACCGCCGCCTCCCGTTTATTCTCTCTCAAGCTTCTCTCCCCGC
TACCGCTCCGAGTCCCAAGTCCCACCCGGCCAGCCTCCATCGCTAGTACCACTCCTAGTC
CCAAGTCCCAGCCTTCCATCGACGGCGAGGGAGGGAGAGGCGACCTCCATCCGGGCTGGT
TAGATTCATCGCTTTTCTTGTCGCTGTCCCTCGGCCTTTCCCCCTACTGTGCTCCGAGTC
TGGGAGAAGCGACTCGCGCACGCGCTCGGCCAAACCAATTAAGCACAGAGCGGGGCTCTC
GGGCGAGAACGCGCTGAGGCAGTGCTGGGTTTGCAGTTCGTGCCGTAGCGTTTTTTTTGT
GTGTGTGCCGAAGCGGAGAGGCGATGGCTGCGCCGAGGAAGGGGACGGCGACGCCGCTGG
GCACCGTGTTCTCGCCGGAGGAGACGAAGAGGGCCGTGGCGAGGGTGGCCGAGTCCGTCG
CTGGGCGCCGCGCCGAGCTCGCCCGCCTCCAGGGTTTCGCCGCCGACAACGCCGCCCTCG
TCTCCCTCGTCAACAGGCTCCCCGACGAACTCTCTCACGATATCATGGTTCCCTTTGGTG
GCGCCGCCTTTTTCCCAGGGCGTTTAATACACACAAATGAACTCTTGGTGCTTCTGGGTG
AGGGGTACTATGCAGAGAGGTCGGCTAAGCAGACGACTAATATATTGCACAGGAGGGGGC
AGGAATTGGAAGCTCAAGTCGAAGCAATGAAGGCAACTATCGCTGACCTTGAAGCTGAGG
CCAAATTCTTTGAATTCACGGCCACCGAGGCTTCAGAGGGTCTTGTTGAAATCAGGGAAG
AGTATGATGAGGACTTAGAGACGAATTCATCAAGATCAGAGGCTTCAGTTGCTACTGTGG
TTATGTCCGATAAAGACAGGGAACATGCTCGAATCATGGCAAGGTTAGATGAACTTGAAA
GGGAAGAAAAGGATGCTGGAAGTGCCTGTGAAGATGATAATGATGGCGACGATGATGATG
GAGATGCTGGAACAAGTGATGATGGCGAGGAAAATAAGGAATCTGGAAATGCTTTAAGTG
ATGTCAATGAAGACTACAGTTCTGGTTTTGGCGCTTCATTTTCTGGAAGTGGCGGCAATG
ATAGGAGTCATGGGAATATTAAGGCAACAAATTCTGATGTCCGAGTTCACACTAAAGCTG
TTACTTTTGAAGACGACAAATATGTAGTTAGTTCGTCAAAGTCTCCTCCCTTGCTACTGG
ATTCTATACAGTCTGATCCTGTGCTCAAGAATTCTTCAGACCCCGCTCTATCTCGTGACA
GAAAGATAATATCAAGTGGACGAAAGGCCTTTACAGGATCTATCATTGAGCACGACGACA
ATGTTTCCACCATTGAACCTTCTGTGGCTAGTTCGTTGGCAAAACCTGGTACTTGTGCTT
CTTCAAGGCCCGTGTCAAGGTTCAAGATGCAGAAAGGAGGGCGGTGAGTCTGGACACTCG
GGTGGACCTTTGGTGTCTGATAGATTGCATCTTGAACACGTTCAAATTGTCTGTGCTGTC
TGAACTCCTGGACGCTAGACATGTTGTGGATCCTGGACGCTAGACATGTTGTGGATCCTG
GACGCTAGACATGTTCTGGAGTGATTGTCTTCTGCCGACTGTAGAGTGAAACCGGGACGT
CCAAGCGAAGAAGGGAATTAAAAACGAGGTTTTTTTTGGTCGGTTAATTATTAGTATCAC
AGGACGTCCAAGCATCGCATTAGTTAGCCACTGCACACAGAGCCTGTCGGCCAATAAGGT
CAGTTAATTACAGATTTAGTGGTGCTAGCTTGCTGTTCCTACTTGTGCTGTAGCAGAGTG
TCATGACATGGTCAGTAGCAGCCGATGAGCGCCGCGAAGTCAGCAGGGCGGCTGCTGGTG
GTGTCTCTTCTCGTTCCCTGGGCGGCGCCGTGGAGCACCAGATTGTCTCTCTCACGTATT
TCAGCGGCAGCAAGGGACGAAGAACCTGCCCTCTGCATGTCAGCTCCACCTGCCATTATA
TGTGTATATTATTTCATTCATTAATTCAGTGGGTAATCGTCACAAACAGCTATATAAGAT
CCAGTAAAATGTTGAATAATCTG