Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011941_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:8:164860198:164864673:-1 gene:Zm00001d011941 gene_biotype:protein_coding transcript_biotype:protein_coding description:aminopeptidases
Sequence

ATGGCGGAGGCGAATGCGGGGAAGGAGAAGAAGGAAGTGGTGCGGCTGGAGCGCGAGTCC
GTGATCCCCATCATGAAGCCCAAGCTCACCATGAAGCTCGCCTACCTCATCGAACATCAG
TCTGACAGAGAAGAATTCTTGAAGCTCTGCAGGAGGGTTGAGTACACCATAAGGGCTTGG
TACCATCTCCAGTTTGATGATATGATGGAACTGTTCGCTCTCTTCGATCCTGTGCATGGT
GCTAAAAAACTCGAGCAGCAGAACTTCCTACCTGAGGAAATCGACACGCTTGAGCAGAAC
TTCCTGTCCTATTTCTTTCGGGTGATGGAAAAGAGCAATTTTAACATAGTAAATGACGAT
GAGGTTGAACTTGCTCATTCTGGACAATATCTGTTGAATCTTCCCATTAAAGTTGATGAA
TCAAAGTTAGATGACAAACTTCTGTCGAAGTATTTTAAGGAGCACCGTCATGAAAACCTG
CCCGACTTCTCAGACAAGTATGTTATATTTCGTAGGGGCATTGGATTGGACCGCACTAGC
AACTTTTTCTTCATGGAGAAAGTGGACATGATCATAGCTCGTGCATGGCGAAGGTTCCTT
GAGAAGACGAGACTGCAAAAGCTGTTCTCAAGAAAGAAAAATAGTAAGCCAAAGATAGAT
TCCAAGAAGAATGATGATTTAGCTAGTGAAATAGAAGACAAGGAGCTTTATGTTGAACGC
ATACGTCTTGAAACAATGGATTTAAGCTTTGGGAATTTATTTGGCAAGGTCACAATTCAA
GAGCCTACATTTGAAGAGAGTGCACTGATTTGTAATATATTCCTTCAGGAGAAAAAGTCC
AAAGGGCCAGGATGA

Peptide Sequence

PEP ID

Zm00001d011941_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:8:164860198:164864673:-1 gene:Zm00001d011941 transcript:Zm00001d011941_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:aminopeptidases
Sequence

MAEANAGKEKKEVVRLERESVIPIMKPKLTMKLAYLIEHQSDREEFLKLCRRVEYTIRAW
YHLQFDDMMELFALFDPVHGAKKLEQQNFLPEEIDTLEQNFLSYFFRVMEKSNFNIVNDD
EVELAHSGQYLLNLPIKVDESKLDDKLLSKYFKEHRHENLPDFSDKYVIFRRGIGLDRTS
NFFFMEKVDMIIARAWRRFLEKTRLQKLFSRKKNSKPKIDSKKNDDLASEIEDKELYVER
IRLETMDLSFGNLFGKVTIQEPTFEESALICNIFLQEKKSKGPG

Transcript Sequence

Transcript ID

Zm00001d011941_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:164860198:164864673:-1 gene:Zm00001d011941 gene_biotype:protein_coding transcript_biotype:protein_coding description:aminopeptidases
Sequence

ACGGACGAACACTGTGCGGATCTGTAACCGTGGTGCGTTTCCACTTCCTCCCCAGCTCAT
CCGCGACAGAGCAATTAGTCCATTGCACACCTCCACTCCTCACCCTTCAATCTTTCGTTC
CCAACTGCGTTTCCTCCTCCGCGTCTTCAAGGAGGGGAGACCTGAAACGAATCCAGTCCA
GGCTGGTGGCTGCCGGCGCTGGACCTGAACGCTGGTGCATACTGCGTAGGCAAGAGCAGG
CAATGGCGGAGGCGAATGCGGGGAAGGAGAAGAAGGAAGTGGTGCGGCTGGAGCGCGAGT
CCGTGATCCCCATCATGAAGCCCAAGCTCACCATGAAGCTCGCCTACCTCATCGAACATC
AGTCTGACAGAGAAGAATTCTTGAAGCTCTGCAGGAGGGTTGAGTACACCATAAGGGCTT
GGTACCATCTCCAGTTTGATGATATGATGGAACTGTTCGCTCTCTTCGATCCTGTGCATG
GTGCTAAAAAACTCGAGCAGCAGAACTTCCTACCTGAGGAAATCGACACGCTTGAGCAGA
ACTTCCTGTCCTATTTCTTTCGGGTGATGGAAAAGAGCAATTTTAACATAGTAAATGACG
ATGAGGTTGAACTTGCTCATTCTGGACAATATCTGTTGAATCTTCCCATTAAAGTTGATG
AATCAAAGTTAGATGACAAACTTCTGTCGAAGTATTTTAAGGAGCACCGTCATGAAAACC
TGCCCGACTTCTCAGACAAGTATGTTATATTTCGTAGGGGCATTGGATTGGACCGCACTA
GCAACTTTTTCTTCATGGAGAAAGTGGACATGATCATAGCTCGTGCATGGCGAAGGTTCC
TTGAGAAGACGAGACTGCAAAAGCTGTTCTCAAGAAAGAAAAATAGTAAGCCAAAGATAG
ATTCCAAGAAGAATGATGATTTAGCTAGTGAAATAGAAGACAAGGAGCTTTATGTTGAAC
GCATACGTCTTGAAACAATGGATTTAAGCTTTGGGAATTTATTTGGCAAGGTCACAATTC
AAGAGCCTACATTTGAAGAGAGTGCACTGATTTGTAATATATTCCTTCAGGAGAAAAAGT
CCAAAGGGCCAGGATGATAGGGCAATTCATGTAAAGCACTTCAAAAATATCCCAATGGCA
GACATGGAGTTGGTTCTGCCTGAGAAGAAAAACCCGAGCCTCACACCTATGGACTGGGTT
CAATTTATTGTTTCTGTTGTCATTGGACTTGTTACACTCATCAGTTCACTGGAAATGCCT
AAAGCTGATTTCTGGGTTGTAATTGCAATCCTCTCTGCACTGGCAGGATATTGCGCGAAG
ATCTATTTCTCGTTTCAACAGAATATGGCAACCTACCAAAACTTAATCACTCAATCAATG
TATGACAAACAACTAGATAGTGGGAAAGGCACACTCCTCCACCTCTGTGATGATGTGATT
CAACAGGAGGTCAAGGAGGTCATAATTGCCTACTACATTTTGATGGAGAATGGAAAGGCT
ACCAGTGATGATCTTGACTTGCAATGCGAGGAGTTAATCCAGGAAGAGTTTGGCTTGCAA
TGCAATTTTGAGGTGATGGATGCAGTTCAGAAGCTGGAGAGGCTTGGTGTCATTACAAGA
GTGAGTTCTCACTTGTTTCTTTTTCTTCTCATGGTGCCACCTGATCAGAGCATAGGGACG
TTTTCTTACAGATACAGTGCACAGAATAACGATTTTTGCAGACACGTTTACAGGGCCAGA
AGTTTTTGCATCTACTGACCATCATGTTGTCACGTATTGTTCTCTGCTTCTTTTTTTCTT
TTTCTTTCTGCCCAATACTGAAGGCCGTTTTGCATCCAGGACTCTATTGGAAGGATTTGC
TGTGTCCCTCTAAAGCGTGCCAATGAGATCATCGGCGCGACCACGGAAGAACTGGTTATG
AAAGCCAGGCAAAGCTAGCAATCTATTATTTTGAACAATGTAGCCGCATTGTAGATTCTT
GCCTGATGGCGCTGTAACGTTTATGGTTACTCCAGAAAGTCCAAACACTGAACTCTTGCA
CACCAGGAGATAAGTACATTCTGGTCATCTCCACAGTAGTTCTGGGAGAGCTACAAGAAA
ATGTGGTTGTATTTATTTTTTTTTATTTTTTTGGTGGGGGGTACTATGGTTTGTGGAACG
TCGTCGAGGGTGTTGTAAGCATGTAGCATTCTTTTGATAACAAGCGTGGTAGGAAGGATG
TTTG