Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011930_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:164802584:164803787:-1 gene:Zm00001d011930 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tropinone reductase 2

Sequence

ATGGCGGCGGCGGCGGGCATCCGGAGCAGGGAGGAACGGTGGAGCCTCGCCGGTAAGACG
GCGCTCGTCACCGGAGGAAGCAAGGGGATCGGGCGCGCGATCGTGGAGGAGCTCGCGGGG
TTCGGGGTGCGCGTGCACACGTGCGCCCGCACCGCGGCCGACCTGGACGAGCGCCTGCGC
GCGTGGGCCGCGGACGCCCGCCTGCCGGGCCGCGTCACGGCGTCCGTGTGCGACGTGTCG
GCGCGGGGCGACCGGGAGGCGCTGGTGGCGGCGGCGCGGGCGGAGCTGGGGCCCAGGCTG
GACATCCTCGTCAACAACGCCGGGCAGAGCACGTTCCGCGCGGCCACGGAGACGGCGGCC
GGCGACTACGCGCGCCTCATGGCCACCAACCTCGAGTCCTGCTTCCACCTCGCGCAGCTG
GCGCACCCGCTGCTCCTCGCCGCGGGCGCGGGCGCGGGCGCGGGCGCCGCGGTGGTGAAC
GTGTCCTCCATCGCGGGGCTCGTCGCGTACCCGGCGCTGGCGGCGTACTCGGCGACCAAG
GGCGGGCTGAACCAGCTCACGCGCAGCCTGGCCGCCGAGTGGGCCGGCGACGGCGTGCGC
GTCAACTGCGTCGCGCCGGGCGGCGTCCAGACGGACATGTTCAGCAGCGTCGCGCTGGAG
ATGGACCCGGACCCGGAGACGTCGCTGAGGATGATGGAGGCGGAGCTGGCGCGGGTGCCG
TTGCGCCGATTCGGCGAGACCGAGGAGATCGCGTCCCTCGTCGCCTTCCTCTGCATGCCC
GCCTCGTCCTACATCACCGGGCAGGTCATCTGCGCCGACGGTGGCCGCACCATTGCTGCC
TAG

Peptide Sequence

PEP ID

Zm00001d011930_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:164802584:164803787:-1 gene:Zm00001d011930 transcript:Zm00001d011930_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tropinone reductase 2

Sequence

MAAAAGIRSREERWSLAGKTALVTGGSKGIGRAIVEELAGFGVRVHTCARTAADLDERLR
AWAADARLPGRVTASVCDVSARGDREALVAAARAELGPRLDILVNNAGQSTFRAATETAA
GDYARLMATNLESCFHLAQLAHPLLLAAGAGAGAGAAVVNVSSIAGLVAYPALAAYSATK
GGLNQLTRSLAAEWAGDGVRVNCVAPGGVQTDMFSSVALEMDPDPETSLRMMEAELARVP
LRRFGETEEIASLVAFLCMPASSYITGQVICADGGRTIAA

Transcript Sequence

Transcript ID

Zm00001d011930_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:164802584:164803787:-1 gene:Zm00001d011930 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tropinone reductase 2

Sequence

ACGTTAAGACAAGGCGAAGGTACCAGGCATCTCTGTTCATCCTGTGATGGAGAATCCACT
GCACAGTGCCGGGCGTTCACGAACTTGCTAGTCTAGTACAGTGTATATATATTCCGCGAC
TGCGACTACAATGGGCGACAGATCGTGTGCAATCGAGAGCGAGCTACCTCCATGGCGGCG
GCGGCGGGCATCCGGAGCAGGGAGGAACGGTGGAGCCTCGCCGGTAAGACGGCGCTCGTC
ACCGGAGGAAGCAAGGGGATCGGGCGCGCGATCGTGGAGGAGCTCGCGGGGTTCGGGGTG
CGCGTGCACACGTGCGCCCGCACCGCGGCCGACCTGGACGAGCGCCTGCGCGCGTGGGCC
GCGGACGCCCGCCTGCCGGGCCGCGTCACGGCGTCCGTGTGCGACGTGTCGGCGCGGGGC
GACCGGGAGGCGCTGGTGGCGGCGGCGCGGGCGGAGCTGGGGCCCAGGCTGGACATCCTC
GTCAACAACGCCGGGCAGAGCACGTTCCGCGCGGCCACGGAGACGGCGGCCGGCGACTAC
GCGCGCCTCATGGCCACCAACCTCGAGTCCTGCTTCCACCTCGCGCAGCTGGCGCACCCG
CTGCTCCTCGCCGCGGGCGCGGGCGCGGGCGCGGGCGCCGCGGTGGTGAACGTGTCCTCC
ATCGCGGGGCTCGTCGCGTACCCGGCGCTGGCGGCGTACTCGGCGACCAAGGGCGGGCTG
AACCAGCTCACGCGCAGCCTGGCCGCCGAGTGGGCCGGCGACGGCGTGCGCGTCAACTGC
GTCGCGCCGGGCGGCGTCCAGACGGACATGTTCAGCAGCGTCGCGCTGGAGATGGACCCG
GACCCGGAGACGTCGCTGAGGATGATGGAGGCGGAGCTGGCGCGGGTGCCGTTGCGCCGA
TTCGGCGAGACCGAGGAGATCGCGTCCCTCGTCGCCTTCCTCTGCATGCCCGCCTCGTCC
TACATCACCGGGCAGGTCATCTGCGCCGACGGTGGCCGCACCATTGCTGCCTAGGCCTTC
GCGCTATGCATGCTACACTGAGTACCTGTACTGAACGTGTACGTGCCGACGACTCCACAC
GCACGGATAATAATGAATCCGATCCGCTCGCCGAATTCCATT