Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011900_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:8:164238542:164244611:-1 gene:Zm00001d011900 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding protein BRN1
Sequence	ATGGCCGAGGCCGACCTGCTCGCCTTGTTCCGCGAGGTAGCCGCCGTCGACGAGGTCACC GTCATCAAGGACAAGGCCACCAAGGTCTCCCGAGGGTGCTGCTTCGTCATATGCCCCTCA AGGGAGGAAGCTGACAAGGCGGTGAATGCCTACCACAACAAGCAAACGCTCTCTGGGGCA TCAAGTCCTTTGCAAGTAAAATATGCTGATGGGGAGTTGGAGAGGCTTGAACATAAGCTT TTCATTGGAATGCTTCCGAAAAATGTTACAGACACTGAGTTGACTGATTTGTTTTCCAAA TATGGGAATGTCACGGATTTGCAAATTTTGAGAGGTTCACAACAAACAAACAAAGCTGGC TGTGCCTTCATTAAATATCAAACAAAAGATCAAGCATTGGCAGCTATTGAAGCTCTAAAC GGGAAGCACAAAATAGAGGGTTCTAGCGTGCCATTGGTTGTCAAATGGGCTGATACAGAA AAGGAAAGGCAGGCTCGGAAAGCACAAAAAGCTCAGTCACAGCTATCTCATATACCCAAT GCAAGTCCAATGCAGCAGCACTCTTCAGTATTTGGTGCTTTACAGATGGGATATATGCCT CAATACAATGGATTTGGTTATCAGCCACCAGGGACATACGGACTTATGCAGTACCCTCTA TCTCCTATGCAAAATCAAGGCCCCTTCCAGAATATGGTTCAACCTCTTAACCAAGGGAAC TCGATAAGAGGAGTCAATCCTGAAGTGTCTCCCAGTTCAGTTCAAAGGTCATTTAATGCA ATGCAGCTAGGCAGCCCTTATCCTGCTATGCCTGGTATGCAGTATCCTGGATCATATCCC GGTGGTCCCATGGGCAACCGTCATTTGGGAAATTCTCACAATCCGATTAAAGCTCCAAAT TCGAATGCCAATTCCACTGTTTCTTCTAGTCCCAGCAGCAATGCTGGTGGGCAGGTTGAA GGTCCTCCTGGAGCCAACCTATTTATTTATCATATCCCACAAGAATACGGTGACCAGGAG CTTTCCAGCGCCTTCCAGAGTTTCGGAAGAGTAGTAAGCGCTAAGGTGTTCGTAGATAAA GCAACGGGCGTGAGCAAATGCTTCGGTTTTGTGAGCTACGACTCTCCTGCCTCCGCGCAG GCAGCCATCAACAGGATGAACGGCTACCAGTTAGGCGGTAAAAAGCTCAAGGTACAACTG AAGAGAGAAAACAACACCAAGCACAGTAGTAAACCGTTTTGA

Peptide Sequence

PEP ID	Zm00001d011900_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:8:164238542:164244611:-1 gene:Zm00001d011900 transcript:Zm00001d011900_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding protein BRN1
Sequence	MAEADLLALFREVAAVDEVTVIKDKATKVSRGCCFVICPSREEADKAVNAYHNKQTLSGA SSPLQVKYADGELERLEHKLFIGMLPKNVTDTELTDLFSKYGNVTDLQILRGSQQTNKAG CAFIKYQTKDQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQSQLSHIPN ASPMQQHSSVFGALQMGYMPQYNGFGYQPPGTYGLMQYPLSPMQNQGPFQNMVQPLNQGN SIRGVNPEVSPSSVQRSFNAMQLGSPYPAMPGMQYPGSYPGGPMGNRHLGNSHNPIKAPN SNANSTVSSSPSSNAGGQVEGPPGANLFIYHIPQEYGDQELSSAFQSFGRVVSAKVFVDK ATGVSKCFGFVSYDSPASAQAAINRMNGYQLGGKKLKVQLKRENNTKHSSKPF

Transcript Sequence

Transcript ID	Zm00001d011900_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:164238542:164244611:-1 gene:Zm00001d011900 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding protein BRN1
Sequence	GGGGCAAGGCCGCGGCGGCGTCTGCGGCCGCGGCGGAGGCAGGAGGCGGAGGAGCCAAGG AGGGCGGCGAGGAGAGGACCGTCAAGCTCTTCGTGGGCCAGGTGCCCAAGCACATGGCCG AGGCCGACCTGCTCGCCTTGTTCCGCGAGGTAGCCGCCGTCGACGAGGTCACCGTCATCA AGGACAAGGCCACCAAGGTCTCCCGAGGGTGCTGCTTCGTCATATGCCCCTCAAGGGAGG AAGCTGACAAGGCGGTGAATGCCTACCACAACAAGCAAACGCTCTCTGGGGCATCAAGTC CTTTGCAAGTAAAATATGCTGATGGGGAGTTGGAGAGGCTTGAACATAAGCTTTTCATTG GAATGCTTCCGAAAAATGTTACAGACACTGAGTTGACTGATTTGTTTTCCAAATATGGGA ATGTCACGGATTTGCAAATTTTGAGAGGTTCACAACAAACAAACAAAGCTGGCTGTGCCT TCATTAAATATCAAACAAAAGATCAAGCATTGGCAGCTATTGAAGCTCTAAACGGGAAGC ACAAAATAGAGGGTTCTAGCGTGCCATTGGTTGTCAAATGGGCTGATACAGAAAAGGAAA GGCAGGCTCGGAAAGCACAAAAAGCTCAGTCACAGCTATCTCATATACCCAATGCAAGTC CAATGCAGCAGCACTCTTCAGTATTTGGTGCTTTACAGATGGGATATATGCCTCAATACA ATGGATTTGGTTATCAGCCACCAGGGACATACGGACTTATGCAGTACCCTCTATCTCCTA TGCAAAATCAAGGCCCCTTCCAGAATATGGTTCAACCTCTTAACCAAGGGAACTCGATAA GAGGAGTCAATCCTGAAGTGTCTCCCAGTTCAGTTCAAAGGTCATTTAATGCAATGCAGC TAGGCAGCCCTTATCCTGCTATGCCTGGTATGCAGTATCCTGGATCATATCCCGGTGGTC CCATGGGCAACCGTCATTTGGGAAATTCTCACAATCCGATTAAAGCTCCAAATTCGAATG CCAATTCCACTGTTTCTTCTAGTCCCAGCAGCAATGCTGGTGGGCAGGTTGAAGGTCCTC CTGGAGCCAACCTATTTATTTATCATATCCCACAAGAATACGGTGACCAGGAGCTTTCCA GCGCCTTCCAGAGTTTCGGAAGAGTAGTAAGCGCTAAGGTGTTCGTAGATAAAGCAACGG GCGTGAGCAAATGCTTCGGTTTTGTGAGCTACGACTCTCCTGCCTCCGCGCAGGCAGCCA TCAACAGGATGAACGGCTACCAGTTAGGCGGTAAAAAGCTCAAGGTACAACTGAAGAGAG AAAACAACACCAAGCACAGTAGTAAACCGTTTTGACAGACAAGGCAGCAGCCGTCCGGTA CCCGGTACATATTAATTGACCATCAACACATTGCAGCAGCAGCCTCAGGGCCTGGGGAGG GAAGAGACCCGTGTACCCCTCTTTGTTCACTTCAACATTCTTGGAGATTCGTCAGTCAGC TCAGCTCGTGTAATTCATTGCAGCAGACATAGGCCGTAGCAGCAGTTTGTACCATGATCA GATCACTTGTACACATGATTCATTCAATTGTTACTGACAGCCGGCTTTCATC