Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011882_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:163875069:163878710:1 gene:Zm00001d011882 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:embryo-sac basal-endosperm layer embryo-surrounding-region description: embryo-sac basal-endosperm layer embryo-surrounding-region
Sequence

ATGCTACACGATGTGTGCCTTGTGCTATTGATATTTGTTGTTCTTGCAAATCTTGAAACT
ACAATATCAATCCATCATAGTCATTCAAGTATGAGAGTTTTATCCCAGAATATGAGCTCT
TCATTCACCATTGCTGATCCAATAAGAATTGAGGCATCAACTGAATCAAACCTTGTAGAA
CATTATGCAAGATATAGAGCAGACAGCCCCCCTGCTGGTGGATATACAGGTGGCATGGCA
ACTATAGATGTTTATAGTCACCAACATATAAAGAGCGGACAAGTAACTGCTGCAATAATA
TGGGTGTCCAATGGCAAGCTTGACCAGAGTGATGACTTAAATGATATACAAGCCGGATGG
GTGGTTGATCCATCCAGCTATGGAGACAGCAAGACACACTTTTTTGTATACTGGACGGCT
GATGGATACAAATCCACTGGATGCTTTAACCTGGACTGTAATGGTTTTGTACCTGTGGAT
GATGCTCCTATCACACCAGGAGATACTTTAGAACCAGAAAATGGCCAATCTAAAATATCA
TTCAAGATATTTAAGAATAAAGATGATGGAGATTGGTGGCTACACTTTGGATATGACATA
AACAACCTGAAACCCGTTGGATTTTGGAAGAAAAGCATATTTACCAACTTGCAGGATCAT
GCTGGATTCATAACCTGGGGTGGTTATACTAGTTGTCCCAATGGAAATGCAAGTCCTCCC
ATGGGCAATGGGCAATGGCCTGGAAAAAACTCAGCAAGTGTTCGAAATGTTCAATTTGTT
GATTCTAGTGGCCAGGGATATGCAGTACCTGTTTGGGCTCTTCGTGTCTTTGCAAGCAAC
ACGAAATGCTACCAAGCTAGCACCTTTTTTGATAGCATGTTCTACTACGGGGGTCCAGGC
GGCTGCACTGACTAG

Peptide Sequence

PEP ID

Zm00001d011882_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:163875069:163878710:1 gene:Zm00001d011882 transcript:Zm00001d011882_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:embryo-sac basal-endosperm layer embryo-surrounding-region description: embryo-sac basal-endosperm layer embryo-surrounding-region
Sequence

MLHDVCLVLLIFVVLANLETTISIHHSHSSMRVLSQNMSSSFTIADPIRIEASTESNLVE
HYARYRADSPPAGGYTGGMATIDVYSHQHIKSGQVTAAIIWVSNGKLDQSDDLNDIQAGW
VVDPSSYGDSKTHFFVYWTADGYKSTGCFNLDCNGFVPVDDAPITPGDTLEPENGQSKIS
FKIFKNKDDGDWWLHFGYDINNLKPVGFWKKSIFTNLQDHAGFITWGGYTSCPNGNASPP
MGNGQWPGKNSASVRNVQFVDSSGQGYAVPVWALRVFASNTKCYQASTFFDSMFYYGGPG
GCTD

Transcript Sequence

Transcript ID

Zm00001d011882_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:163875069:163878710:1 gene:Zm00001d011882 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:embryo-sac basal-endosperm layer embryo-surrounding-region description: embryo-sac basal-endosperm layer embryo-surrounding-region
Sequence

CTATCACCTGGATGAGGAGGATATTTCCGAATCATATATTGTGCGATATATGTAGTTGCT
TTATTACCTTTGTCTTCTTGCTGATACTAATATGATACATCCCAACTAAGCATATCTCTT
ACAATTATTATTTTAGCTAGCAAATCTCTTCATGTACAGAAATATGCAATATACCATTCC
AACTAAGCAAACCTCTTGGTATTATTAAGCTAAGCACAGATTGTGCTATATATGTAGTTG
CTTTATCCTTGTATTATTGCTGATTGATGCTAATATTGACAACTAAGTTCTTATGATTAT
TTTTAGCCAGTGAATATCTTCCTATATAGAAAGATATAATAAACCATTCCAGCTAAGCAT
ATCTCTTGCAATTATTAAGGTTAGAGTATATTGTGCTATATATAGTTGCTTTGTCCTTGT
TTTCTAAAGGTGCTTATTTTCACTTGACTAGAGAAATATAACCATCCTTACAAAATGCTA
CACGATGTGTGCCTTGTGCTATTGATATTTGTTGTTCTTGCAAATCTTGAAACTACAATA
TCAATCCATCATAGTCATTCAAGTATGAGAGTTTTATCCCAGAATATGAGCTCTTCATTC
ACCATTGCTGATCCAATAAGAATTGAGGCATCAACTGAATCAAACCTTGTAGAACATTAT
GCAAGATATAGAGCAGACAGCCCCCCTGCTGGTGGATATACAGGTGGCATGGCAACTATA
GATGTTTATAGTCACCAACATATAAAGAGCGGACAAGTAACTGCTGCAATAATATGGGTG
TCCAATGGCAAGCTTGACCAGAGTGATGACTTAAATGATATACAAGCCGGATGGGTGGTT
GATCCATCCAGCTATGGAGACAGCAAGACACACTTTTTTGTATACTGGACGGCTGATGGA
TACAAATCCACTGGATGCTTTAACCTGGACTGTAATGGTTTTGTACCTGTGGATGATGCT
CCTATCACACCAGGAGATACTTTAGAACCAGAAAATGGCCAATCTAAAATATCATTCAAG
ATATTTAAGAATAAAGATGATGGAGATTGGTGGCTACACTTTGGATATGACATAAACAAC
CTGAAACCCGTTGGATTTTGGAAGAAAAGCATATTTACCAACTTGCAGGATCATGCTGGA
TTCATAACCTGGGGTGGTTATACTAGTTGTCCCAATGGAAATGCAAGTCCTCCCATGGGC
AATGGGCAATGGCCTGGAAAAAACTCAGCAAGTGTTCGAAATGTTCAATTTGTTGATTCT
AGTGGCCAGGGATATGCAGTACCTGTTTGGGCTCTTCGTGTCTTTGCAAGCAACACGAAA
TGCTACCAAGCTAGCACCTTTTTTGATAGCATGTTCTACTACGGGGGTCCAGGCGGCTGC
ACTGACTAGCAACCTTCAACATTTGAGGCACCCATATAGCTTCTCTGATGAAATAAAGAG
GTTGGTCAAGGATATATAGCTTATCACCAGTCTTTTCCCCCGATAACCTTGCTTGTATCA
TCCTCTATTCAAATATAATGGCTGTCATATACCTCTAAGTGTTTGGCTCGCCATATGTAA
CATTATCAGATTGCAGAGAGGTATACAGTCTTGTTCATGTACAAGGGATTAA