Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011878_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:163837344:163840402:1 gene:Zm00001d011878 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulatory protein NPR5
Sequence	ATGGAGGACACCCTCAAGTCGCTGTCCATGGACTACCTCAACCTGCTCATCAACGGGCAG GCCTTCAGCGACGTCACGTTCAACGTGGAGGGCCGCCTCGTGCACGCGCACCGCTGCATC CTGGCCGCGCGCAGCCTCTTCTTCCGCAAGTTCTTCTGCGGCGCCGAGCAGGCCGCCGCC GGGCCCGGCGCGCTGCTGCTGGACCACCTCAGCCCGCGTTCCCCGTCCGGCACCTCCTCC CCGCGCGGCGCCTCCGCCGCCGCGCCGGGCGCCGCCGTCATACCCGTCAACTCCGTCAGC TACGAGGTGTTCCTGCTGCTGCTGCAGTTCCTCTACAGCGGCCAGGTGTCCCTGGTGCCG CAGAAGGGGGAGCCCCGGCCGGGCTGCGGCGAGCGCGCGTGCTGGCACACGCACTGCGCC GCCGCCGTCGACCTCGCGCTCGACACGCTCGCCGCCGCACGCTCCTTCGGCGTCGAGGAG CTCGCGCTCCTCACCCAGAAGCAGCTGGCCGGCATGGTGGAGAAGGCGTCGATCGAGGAC GTGATGAAGGTGCTGATGGCGTCGCGGAAGCAGGACCTGCACCAGCTGTGGACCACGTGC TCCCACCTCGTGGCCAAGTCCGGGCTGCCGCCGGAGGTGCTCGCCAAGCACCTCCCCATG GACGTCGTGTCCAAGATCGACGAGCTCCGCCTCAAGTCCTCGCTGTCCCGCCGCTCGCCG TTCCTCGCGCACCACCACCACCCGGCACCGGGGGGCGGCATGGAGGCCTCGTCCGCGGCC GACATCGACGACCACCACAAGATCCGGCGCATGCGGCGCGCGCTCGACTCCTCCGACGTG GAGCTCGTGAAGCTCATGGTGATGGGCGAGGGGCTGAACCTGGACGAGGCGCTGGCGCTG CACTACGCCGTGGAGAACTGCAGCCGGGAGGTGGTGAAGGCGCTGCTGGAGCTGGGCGCC GCCGACGTGAACCACACCGCGGGCCCCGCCGGGAAGACGCCGCTCCACGTGGCCGCCGAG ATGGTGTGCCCCGACATGGTCGCCGTGCTTCTCGACCACCACGCCGACCCCAACGTGCGC ACCGTCGAGGGCGTGACGCCGCTGGACATCCTCCGCACGCTCACCTCCGACCTCCTCTTC AAGGGCGCCGTGCCGGGGCTCGCGCACATCGAGCCCAACAAGCTCCGGCTCTGCCTCGAG CTCGTGCAGTCGGCGGCCATGGTCATGTCCCGCGAGGACGCGCACACGGCGGTCAACGCC GCGCCCATGTACGGCGAGCCTTCCGGCGGCGGCGGCTGCGGCGTGTACAGTGCGAGCGGC ACCAGCAGCACGAGCTTGGTGAACCTGAACCTGGACAACAGGATGGTGTACCTGAACCTA GGGATGGACGCGCAGTTCGGCAAGATGGGCGACGGCGATGACGGCGGGGGCAGGGGGCCG TCTTCTTTGTTCTCCCCGCATGGCTACCATTGA

Peptide Sequence

PEP ID	Zm00001d011878_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:163837344:163840402:1 gene:Zm00001d011878 transcript:Zm00001d011878_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulatory protein NPR5
Sequence	MEDTLKSLSMDYLNLLINGQAFSDVTFNVEGRLVHAHRCILAARSLFFRKFFCGAEQAAA GPGALLLDHLSPRSPSGTSSPRGASAAAPGAAVIPVNSVSYEVFLLLLQFLYSGQVSLVP QKGEPRPGCGERACWHTHCAAAVDLALDTLAAARSFGVEELALLTQKQLAGMVEKASIED VMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHLPMDVVSKIDELRLKSSLSRRSP FLAHHHHPAPGGGMEASSAADIDDHHKIRRMRRALDSSDVELVKLMVMGEGLNLDEALAL HYAVENCSREVVKALLELGAADVNHTAGPAGKTPLHVAAEMVCPDMVAVLLDHHADPNVR TVEGVTPLDILRTLTSDLLFKGAVPGLAHIEPNKLRLCLELVQSAAMVMSREDAHTAVNA APMYGEPSGGGGCGVYSASGTSSTSLVNLNLDNRMVYLNLGMDAQFGKMGDGDDGGGRGP SSLFSPHGYH

Transcript Sequence

Transcript ID	Zm00001d011878_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:163837344:163840402:1 gene:Zm00001d011878 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulatory protein NPR5
Sequence	GGCCGCCCGCCCATGGAGGACACCCTCAAGTCGCTGTCCATGGACTACCTCAACCTGCTC ATCAACGGGCAGGCCTTCAGCGACGTCACGTTCAACGTGGAGGGCCGCCTCGTGCACGCG CACCGCTGCATCCTGGCCGCGCGCAGCCTCTTCTTCCGCAAGTTCTTCTGCGGCGCCGAG CAGGCCGCCGCCGGGCCCGGCGCGCTGCTGCTGGACCACCTCAGCCCGCGTTCCCCGTCC GGCACCTCCTCCCCGCGCGGCGCCTCCGCCGCCGCGCCGGGCGCCGCCGTCATACCCGTC AACTCCGTCAGCTACGAGGTGTTCCTGCTGCTGCTGCAGTTCCTCTACAGCGGCCAGGTG TCCCTGGTGCCGCAGAAGGGGGAGCCCCGGCCGGGCTGCGGCGAGCGCGCGTGCTGGCAC ACGCACTGCGCCGCCGCCGTCGACCTCGCGCTCGACACGCTCGCCGCCGCACGCTCCTTC GGCGTCGAGGAGCTCGCGCTCCTCACCCAGAAGCAGCTGGCCGGCATGGTGGAGAAGGCG TCGATCGAGGACGTGATGAAGGTGCTGATGGCGTCGCGGAAGCAGGACCTGCACCAGCTG TGGACCACGTGCTCCCACCTCGTGGCCAAGTCCGGGCTGCCGCCGGAGGTGCTCGCCAAG CACCTCCCCATGGACGTCGTGTCCAAGATCGACGAGCTCCGCCTCAAGTCCTCGCTGTCC CGCCGCTCGCCGTTCCTCGCGCACCACCACCACCCGGCACCGGGGGGCGGCATGGAGGCC TCGTCCGCGGCCGACATCGACGACCACCACAAGATCCGGCGCATGCGGCGCGCGCTCGAC TCCTCCGACGTGGAGCTCGTGAAGCTCATGGTGATGGGCGAGGGGCTGAACCTGGACGAG GCGCTGGCGCTGCACTACGCCGTGGAGAACTGCAGCCGGGAGGTGGTGAAGGCGCTGCTG GAGCTGGGCGCCGCCGACGTGAACCACACCGCGGGCCCCGCCGGGAAGACGCCGCTCCAC GTGGCCGCCGAGATGGTGTGCCCCGACATGGTCGCCGTGCTTCTCGACCACCACGCCGAC CCCAACGTGCGCACCGTCGAGGGCGTGACGCCGCTGGACATCCTCCGCACGCTCACCTCC GACCTCCTCTTCAAGGGCGCCGTGCCGGGGCTCGCGCACATCGAGCCCAACAAGCTCCGG CTCTGCCTCGAGCTCGTGCAGTCGGCGGCCATGGTCATGTCCCGCGAGGACGCGCACACG GCGGTCAACGCCGCGCCCATGTACGGCGAGCCTTCCGGCGGCGGCGGCTGCGGCGTGTAC AGTGCGAGCGGCACCAGCAGCACGAGCTTGGTGAACCTGAACCTGGACAACAGGATGGTG TACCTGAACCTAGGGATGGACGCGCAGTTCGGCAAGATGGGCGACGGCGATGACGGCGGG GGCAGGGGGCCGTCTTCTTTGTTCTCCCCGCATGGCTACCATTGACAAGCTGGAGCGGCC GGCTGCTGCTCTACTATATATCTCCTTGTAAGCTTAGAACTAATTAATTACATGTTGTTA TTCATATCCACATTACAGGAGATGAAGAAGATGATGATTGGAAAGATGGCGAGACGATCC TTTAATTTTTTGCACTCTATCTATATATCATCATGTGACTCTTTTAGCAGCTAGAGACGA TTAGAGAGAGACAGAGAGATCATGCATGCAAAGTGATGCATCACAAGAGCTTGGGTCGAT CTTT