Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011854_T092
CDS Infomation	cds chromosome:B73_RefGen_v4:8:162918720:162923330:-1 gene:Zm00001d011854 gene_biotype:protein_coding transcript_biotype:protein_coding description:Villin-2
Sequence	ATGTCAACTGCAAAAGTGTTAGATCCTGCTTTTCAAGGGGCTGGCCAAAAAGTTGGGACA GAAATATGGCGGATTGAAGATTTTAAGCCAGTTCCGCTGCCAAAATCTGATTATGGTAAA TTCTACTGTGGAGATTCATACATAGTTCTGCAGACGACCTGTACTAAAGGTGGTGCCTAT CTATATGATATCCACTTCTGGATTGGGAAAGATTCGAGTCAAGATGAAGCTGGGACTGCA GCAATCAAGACAGTTGAACTTGATGCCATCCTTGGGGGTCGTGCAATCCAACATAGGGAA CTCCAAGGTTATGAATCTGACAAATTCTTGTCATACTTCAAGCCTTGCATTATACCTTTG GAGGGTGGTTTCGCCTCTGGGTTCAAAAAGCCTGAAGAGGAGAAGTTTGAAACACGGTTG TATATTTGCAGAGGGAAGAGAGCTATTCGGGTTAAAGAGGTTCCCTTCGCCCGGTCATCA TTAAACCATGATGATGTGTTTGTCTTAGATGCTGAAAATAAGATATACCAGTTTAATGGT GCTAACTCCAATATCCAAGAAAGGGCCAAAGCGTTGGAAGTAATCCAACATTTAAAGGAG AAGTACCATGGGGGTGTTTGCGATGTTGCGATCGTTGATGATGGGAAATTACAGGCAGAG TCAGACTCTGGTGAATTCTGGGTCCTTTTTGGAGGTTTTGCACCAATTGGGAAAAAAACC GTGAGTGATGATGATGTTGTACTTGAAACTACAGCACCAAGGCTGTACAGCATCAATGAT GGCCAATTGAAGCTGGAAGAAACAGCTCTTACAAAAGCCGTGCTTGAAAATACCAAATGT TTCTTACTTGACTGTGGGGCTGAAATATATGTATGGGTTGGCCGGGTAACACAAATGGAG GATAGAAAATCTGCCACTAAAGCAGTTGAGGAATTTCTTATTAATCAAAAGCGTCCAAAG ACAACGAGGGTAACTCAAGTGATTCAAGGTTATGAGAGTCATGCTTTCAAGTCCAAGTTT GAATCATGGCCAGTGGGTAATGCTACTGGGAGCCCTGGCGCAGAGGAAGGGCGGGGAAAA GTTGCAGCTTTATTGAAGCAACAAGGTGTTGATCTCAAAGGAGCTGCAAAAAGCACCACT CCAGTAAATGAGGAAGTTCCTCCTTTGCTTGAAGGCGGTGGAAAGCTTGAGGTATGGTGT GTTGATGGCAACGCTAAGACTGCTCTGCCAAAAGAGGATATTGGAAAGTTTTACAGTGGA GACTGTTATATCATTCTCTATACGTATCATTCGGGCGACAAGAAAGAAGAATACTATCTC AGCTACTGGATTGGGAAGGATAGCTTGGTGGACGATCAAGTGTCGGCATCTCAAATAACT AATACAGTGTGGAATTCATTGAAAGGACGGCCAGTTCTGGGTCGTATATACCAAGGGAAG GAGCCACCACAGTTTGTTGCACTTTTCCAGCCCATGATTATCTTGAAGGGTGGAATTGGA TCTGGATACAAGAAGCTCATAGAAGAAAAGGGTGCGACGGGTGAGACTTATACTACTGAA GGCATAGCTCTAATTCGAGTATCTGGGACATCTATCCACAACAACAAGACTCTTCAAGTC GATACGGTGGCAACATCTTTAAGCTCAATGGAGTGTTTCATACTGCAATCTGGAAATGCT ATGTTTACATGGTTTGGCAATTCTAGCACATATGAGCAACAGCAGTGGGCAGCAAAAGTT GCTGAATTTTTGAAGCCTGGCGTTGCAGTGAAGCACTGCAAGGAGGGGACAGAGAGTTCA GGTTTCTGGTTTGCTCTTGGAGGAAAACAGAGTTATACAAATAAAAATGCTCCTCAGGAT ATTATTACTAGAGAGCCTCACTTGTATGCATTCTCA

Peptide Sequence

PEP ID	Zm00001d011854_P092
PEP Infomation	pep chromosome:B73_RefGen_v4:8:162918720:162923330:-1 gene:Zm00001d011854 transcript:Zm00001d011854_T092 gene_biotype:protein_coding transcript_biotype:protein_coding description:Villin-2
Sequence	MSTAKVLDPAFQGAGQKVGTEIWRIEDFKPVPLPKSDYGKFYCGDSYIVLQTTCTKGGAY LYDIHFWIGKDSSQDEAGTAAIKTVELDAILGGRAIQHRELQGYESDKFLSYFKPCIIPL EGGFASGFKKPEEEKFETRLYICRGKRAIRVKEVPFARSSLNHDDVFVLDAENKIYQFNG ANSNIQERAKALEVIQHLKEKYHGGVCDVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKT VSDDDVVLETTAPRLYSINDGQLKLEETALTKAVLENTKCFLLDCGAEIYVWVGRVTQME DRKSATKAVEEFLINQKRPKTTRVTQVIQGYESHAFKSKFESWPVGNATGSPGAEEGRGK VAALLKQQGVDLKGAAKSTTPVNEEVPPLLEGGGKLEVWCVDGNAKTALPKEDIGKFYSG DCYIILYTYHSGDKKEEYYLSYWIGKDSLVDDQVSASQITNTVWNSLKGRPVLGRIYQGK EPPQFVALFQPMIILKGGIGSGYKKLIEEKGATGETYTTEGIALIRVSGTSIHNNKTLQV DTVATSLSSMECFILQSGNAMFTWFGNSSTYEQQQWAAKVAEFLKPGVAVKHCKEGTESS GFWFALGGKQSYTNKNAPQDIITREPHLYAFS

Transcript Sequence

Transcript ID	Zm00001d011854_T092
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:162918720:162923330:-1 gene:Zm00001d011854 gene_biotype:protein_coding transcript_biotype:protein_coding description:Villin-2
Sequence	GGGGAAGCATCTGCTATCATTTTGTTTTCTTCGAAGTAATCCAAGAAAAGTTGCTTCCAG ATGTCAACTGCAAAAGTGTTAGATCCTGCTTTTCAAGGGGCTGGCCAAAAAGTTGGGACA GAAATATGGCGGATTGAAGATTTTAAGCCAGTTCCGCTGCCAAAATCTGATTATGGTAAA TTCTACTGTGGAGATTCATACATAGTTCTGCAGACGACCTGTACTAAAGGTGGTGCCTAT CTATATGATATCCACTTCTGGATTGGGAAAGATTCGAGTCAAGATGAAGCTGGGACTGCA GCAATCAAGACAGTTGAACTTGATGCCATCCTTGGGGGTCGTGCAATCCAACATAGGGAA CTCCAAGGTTATGAATCTGACAAATTCTTGTCATACTTCAAGCCTTGCATTATACCTTTG GAGGGTGGTTTCGCCTCTGGGTTCAAAAAGCCTGAAGAGGAGAAGTTTGAAACACGGTTG TATATTTGCAGAGGGAAGAGAGCTATTCGGGTTAAAGAGGTTCCCTTCGCCCGGTCATCA TTAAACCATGATGATGTGTTTGTCTTAGATGCTGAAAATAAGATATACCAGTTTAATGGT GCTAACTCCAATATCCAAGAAAGGGCCAAAGCGTTGGAAGTAATCCAACATTTAAAGGAG AAGTACCATGGGGGTGTTTGCGATGTTGCGATCGTTGATGATGGGAAATTACAGGCAGAG TCAGACTCTGGTGAATTCTGGGTCCTTTTTGGAGGTTTTGCACCAATTGGGAAAAAAACC GTGAGTGATGATGATGTTGTACTTGAAACTACAGCACCAAGGCTGTACAGCATCAATGAT GGCCAATTGAAGCTGGAAGAAACAGCTCTTACAAAAGCCGTGCTTGAAAATACCAAATGT TTCTTACTTGACTGTGGGGCTGAAATATATGTATGGGTTGGCCGGGTAACACAAATGGAG GATAGAAAATCTGCCACTAAAGCAGTTGAGGAATTTCTTATTAATCAAAAGCGTCCAAAG ACAACGAGGGTAACTCAAGTGATTCAAGGTTATGAGAGTCATGCTTTCAAGTCCAAGTTT GAATCATGGCCAGTGGGTAATGCTACTGGGAGCCCTGGCGCAGAGGAAGGGCGGGGAAAA GTTGCAGCTTTATTGAAGCAACAAGGTGTTGATCTCAAAGGAGCTGCAAAAAGCACCACT CCAGTAAATGAGGAAGTTCCTCCTTTGCTTGAAGGCGGTGGAAAGCTTGAGGTATGGTGT GTTGATGGCAACGCTAAGACTGCTCTGCCAAAAGAGGATATTGGAAAGTTTTACAGTGGA GACTGTTATATCATTCTCTATACGTATCATTCGGGCGACAAGAAAGAAGAATACTATCTC AGCTACTGGATTGGGAAGGATAGCTTGGTGGACGATCAAGTGTCGGCATCTCAAATAACT AATACAGTGTGGAATTCATTGAAAGGACGGCCAGTTCTGGGTCGTATATACCAAGGGAAG GAGCCACCACAGTTTGTTGCACTTTTCCAGCCCATGATTATCTTGAAGGGTGGAATTGGA TCTGGATACAAGAAGCTCATAGAAGAAAAGGGTGCGACGGGTGAGACTTATACTACTGAA GGCATAGCTCTAATTCGAGTATCTGGGACATCTATCCACAACAACAAGACTCTTCAAGTC GATACGGTGGCAACATCTTTAAGCTCAATGGAGTGTTTCATACTGCAATCTGGAAATGCT ATGTTTACATGGTTTGGCAATTCTAGCACATATGAGCAACAGCAGTGGGCAGCAAAAGTT GCTGAATTTTTGAAGCCTGGCGTTGCAGTGAAGCACTGCAAGGAGGGGACAGAGAGTTCA GGTTTCTGGTTTGCTCTTGGAGGAAAACAGAGTTATACAAATAAAAATGCTCCTCAGGAT ATTATTACTAGAGAGCCTCACTTGTATGCATTCTCAT