Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011829_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:8:162242411:162249028:-1 gene:Zm00001d011829 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA mismatch repair protein MLH1
Sequence	ATGGACGTCGATGACCCCTCACCGCGCGCCGGCGGAGGCAGCGGCGTGGACCCGCCCCGC ATCCGGCGGCTGGAGGAATCGGTGGTGAACCGCATCGCGGCGGGGGAGGTGATCCAGCGC CCGTCGTCGGCGGTCAAGGAGCTCGTCGAGAACAGCCTCGACGCCGGCGCGTCCACAGTC TCCGTCACCGTCAAGGATGGAGGACTCAAGCTCATACAGGTTTCCGACGACGGCTACGGC ATTCGGTTTGAGGATTTGCCAATACTGTGTGAAAGGCATACTACCTCAAAGTTATCTGCA TATGAGGATTTACAGACCATAAAATCTATGGGCTTTAGAGGGGAGGCCCTGGCCAGTATG ACTTATGTTGGCCATGTTACTGTGACAACAATAACAGAGGGCCAACTTCATGGCTACCGT GTTTGTTATAAAGATGGAGTAATGGAGAACGAGCCAAAACCCTGTGCTGCAGTTAAAGGA ACTCAAATCATGGTTGAAAATTTATTTTACAATATGGTAGCTCGTAGAAAAACATTGCAG AACTCCAATGATGACTACCCAAAGATTGTAGATTTCATTAGTCGTTTTGCAGTCCATCAC ATCAATGTGAACTTCTCCTGCAGAAAGCATGGAGCCAATAGAGCAGATGTTCATAGTTCG AGCACATCTTCTAGACTAGATACTATTAGGAATGTCTATGGGGCTTCTGTTGTTCGTGAT CTGATTGAAATAGAAGTTTCAGATGAGGATGCTGGAGATGCAGTCTTCAAGATGGATGGT TATATATCAAATGCAAATTATGTGGCAAAGAAAATCATGATGATCCTTTTCATAAATGAT AGGCTTGTAGAGTGTACTGCTTTAAAAAGGGCAATTGAATTTGTGTACTCTGCAACGTTG CCACAAGCATCCAAACCCTTCATATACATGTCCATCAATCTTCCATCAGAACATGTGGAT GTCAATATACACCCAACCAAAAAAGAGGTTAGCCTCTTGAATCAAGAGCGTGTTATTGAA ACTATAAAAAATACCATTGAGGAAAAACTGAGGAATTGTAATACCACAAGGATATTCCAA ACTCAGGCAGTAAACTCAGCACTTACTCAAGTTTACACGCAGAAGGACAAGGGTACTGAG GTCAAAATGGCCCCTGGAGTGAAATCTCAAAAGGCTCCTGTGAGCCAAATGGTCAGAACT GATCCACGCAATCCATCTGGAAGCTTGCACGCTTACTGGCATGGGCAATCTTCAAAACTT GAAAATAAATATGACCTTGTTTCTGTAAGAAATGTTGTAAGATCAAGGAGGAATCCAAAG GATGCTGGTGATTTATCTAGCCGTCATGAGCTTCTTATGGAAATAGATTCTCACTGCCAT CCTGGTCTTTTAGAGGTTATTAAGAATTGCACATATGTTGGCCTGGCTGATGAAGTTTCC GCTTTGATACAATACAATACTCACTTATACCTTGTCAATGTTGTAAATGTTAGTAAAGAA CTCATGTACCAGCAAGCTCTGTGCCGTTTTGGAAACTTCAATGCGATCCAGCTTAGTGAA CCAGCTCCTCTTCAGGAGCTGCTGCTGATGGCACTGAAAGATGATGAATCAATCGGTGAT GAAAATGACGAGGAGAAACTGGAGATTGCAGAGGCAAACTCGAAAATACTGAAAGAAAAC GCTGAGATGATTAATGAGTACTTCTCTATTCATGTTGATCACGATGGGAACTTGACCAGG CTTCCAGTTGTACTTGATCAGTACACCCCTGATATGGACCGTCTCCCAGAATTTGTTTTG ACTATGGGGAATGATGTTACCTGGGATGATGAGAAAGAGTGCTTCAGAACGGCAGCAGCT GCTATTGGGAACTTCTACGCACTCCATCCTCCCATCCTTCCAAATCCATCGGGGAGTGGT GTTCAGGTGTACAAGAAAAATAAAGCTTGCATGGCGAGTGGTGAACATGTTGATAGTACA GATGAAGATGACATTGATCACGAACTACTTGCGGAAGCAGAAACAGCATGGTCCCAACGT GAGTGGACCATTCAACATGTCTTGTTTCCATCCATGCGACTTTTCCTCAAGCCCCCAAAG TCAATGGCAACAGATGGAACCTTTGTTCAGTGA

Peptide Sequence

PEP ID	Zm00001d011829_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:8:162242411:162249028:-1 gene:Zm00001d011829 transcript:Zm00001d011829_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA mismatch repair protein MLH1
Sequence	MDVDDPSPRAGGGSGVDPPRIRRLEESVVNRIAAGEVIQRPSSAVKELVENSLDAGASTV SVTVKDGGLKLIQVSDDGYGIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASM TYVGHVTVTTITEGQLHGYRVCYKDGVMENEPKPCAAVKGTQIMVENLFYNMVARRKTLQ NSNDDYPKIVDFISRFAVHHINVNFSCRKHGANRADVHSSSTSSRLDTIRNVYGASVVRD LIEIEVSDEDAGDAVFKMDGYISNANYVAKKIMMILFINDRLVECTALKRAIEFVYSATL PQASKPFIYMSINLPSEHVDVNIHPTKKEVSLLNQERVIETIKNTIEEKLRNCNTTRIFQ TQAVNSALTQVYTQKDKGTEVKMAPGVKSQKAPVSQMVRTDPRNPSGSLHAYWHGQSSKL ENKYDLVSVRNVVRSRRNPKDAGDLSSRHELLMEIDSHCHPGLLEVIKNCTYVGLADEVS ALIQYNTHLYLVNVVNVSKELMYQQALCRFGNFNAIQLSEPAPLQELLLMALKDDESIGD ENDEEKLEIAEANSKILKENAEMINEYFSIHVDHDGNLTRLPVVLDQYTPDMDRLPEFVL TMGNDVTWDDEKECFRTAAAAIGNFYALHPPILPNPSGSGVQVYKKNKACMASGEHVDST DEDDIDHELLAEAETAWSQREWTIQHVLFPSMRLFLKPPKSMATDGTFVQ

Transcript Sequence

Transcript ID	Zm00001d011829_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:162242411:162249028:-1 gene:Zm00001d011829 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA mismatch repair protein MLH1
Sequence	AGGGCACCAGTTCCCATTTCCTCGGCCTCCGCGCCGGCCATGGACGTCGATGACCCCTCA CCGCGCGCCGGCGGAGGCAGCGGCGTGGACCCGCCCCGCATCCGGCGGCTGGAGGAATCG GTGGTGAACCGCATCGCGGCGGGGGAGGTGATCCAGCGCCCGTCGTCGGCGGTCAAGGAG CTCGTCGAGAACAGCCTCGACGCCGGCGCGTCCACAGTCTCCGTCACCGTCAAGGATGGA GGACTCAAGCTCATACAGGTTTCCGACGACGGCTACGGCATTCGGTTTGAGGATTTGCCA ATACTGTGTGAAAGGCATACTACCTCAAAGTTATCTGCATATGAGGATTTACAGACCATA AAATCTATGGGCTTTAGAGGGGAGGCCCTGGCCAGTATGACTTATGTTGGCCATGTTACT GTGACAACAATAACAGAGGGCCAACTTCATGGCTACCGTGTTTGTTATAAAGATGGAGTA ATGGAGAACGAGCCAAAACCCTGTGCTGCAGTTAAAGGAACTCAAATCATGGTTGAAAAT TTATTTTACAATATGGTAGCTCGTAGAAAAACATTGCAGAACTCCAATGATGACTACCCA AAGATTGTAGATTTCATTAGTCGTTTTGCAGTCCATCACATCAATGTGAACTTCTCCTGC AGAAAGCATGGAGCCAATAGAGCAGATGTTCATAGTTCGAGCACATCTTCTAGACTAGAT ACTATTAGGAATGTCTATGGGGCTTCTGTTGTTCGTGATCTGATTGAAATAGAAGTTTCA GATGAGGATGCTGGAGATGCAGTCTTCAAGATGGATGGTTATATATCAAATGCAAATTAT GTGGCAAAGAAAATCATGATGATCCTTTTCATAAATGATAGGCTTGTAGAGTGTACTGCT TTAAAAAGGGCAATTGAATTTGTGTACTCTGCAACGTTGCCACAAGCATCCAAACCCTTC ATATACATGTCCATCAATCTTCCATCAGAACATGTGGATGTCAATATACACCCAACCAAA AAAGAGGTTAGCCTCTTGAATCAAGAGCGTGTTATTGAAACTATAAAAAATACCATTGAG GAAAAACTGAGGAATTGTAATACCACAAGGATATTCCAAACTCAGGCAGTAAACTCAGCA CTTACTCAAGTTTACACGCAGAAGGACAAGGGTACTGAGGTCAAAATGGCCCCTGGAGTG AAATCTCAAAAGGCTCCTGTGAGCCAAATGGTCAGAACTGATCCACGCAATCCATCTGGA AGCTTGCACGCTTACTGGCATGGGCAATCTTCAAAACTTGAAAATAAATATGACCTTGTT TCTGTAAGAAATGTTGTAAGATCAAGGAGGAATCCAAAGGATGCTGGTGATTTATCTAGC CGTCATGAGCTTCTTATGGAAATAGATTCTCACTGCCATCCTGGTCTTTTAGAGGTTATT AAGAATTGCACATATGTTGGCCTGGCTGATGAAGTTTCCGCTTTGATACAATACAATACT CACTTATACCTTGTCAATGTTGTAAATGTTAGTAAAGAACTCATGTACCAGCAAGCTCTG TGCCGTTTTGGAAACTTCAATGCGATCCAGCTTAGTGAACCAGCTCCTCTTCAGGAGCTG CTGCTGATGGCACTGAAAGATGATGAATCAATCGGTGATGAAAATGACGAGGAGAAACTG GAGATTGCAGAGGCAAACTCGAAAATACTGAAAGAAAACGCTGAGATGATTAATGAGTAC TTCTCTATTCATGTTGATCACGATGGGAACTTGACCAGGCTTCCAGTTGTACTTGATCAG TACACCCCTGATATGGACCGTCTCCCAGAATTTGTTTTGACTATGGGGAATGATGTTACC TGGGATGATGAGAAAGAGTGCTTCAGAACGGCAGCAGCTGCTATTGGGAACTTCTACGCA CTCCATCCTCCCATCCTTCCAAATCCATCGGGGAGTGGTGTTCAGGTGTACAAGAAAAAT AAAGCTTGCATGGCGAGTGGTGAACATGTTGATAGTACAGATGAAGATGACATTGATCAC GAACTACTTGCGGAAGCAGAAACAGCATGGTCCCAACGTGAGTGGACCATTCAACATGTC TTGTTTCCATCCATGCGACTTTTCCTCAAGCCCCCAAAGTCAATGGCAACAGATGGAACC TTTGTTCAGTGAGATTCTCTACTCTATCCAACAATTCTCCGCGGTCACGATTACCCTATA TATCCACCCTATACGTCCCTGGGCCCACCAGCAGGCAGGCGCTGCTGTCCCGTCCCTGGG CCCACCTCTGCTCCGGCGAGAGAGAGCAGCAGCATTTAGCGTAGGCGATCACGAGCGCTG TATTTGGCGTCCGCAGTGCTGGAGAGAGAAGATAGAGTTGGATTTACAGTCACCGCTGCA GGCCTCCAGCTACTGCAAAAATTTACGGGTTCCATTTCCAGCTCTCCGGTGTGGGCAGCC TCAGAGCTTGGACATGTACACCTTTGAGTTGTATAGAGACCATTAAATATGGCCAAACCC CTGACACTGTACTTTGATCTATGGATGGTTTAGTTGCTGCACCTAATTCATTGACATGCT TTACGCACGAGCTCTTATATTTCTCATCAGGTTGGCATTCAATTGTTTAGGAAATTGCCA ATATGGGGTCC