Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011825_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:162158586:162160692:-1 gene:Zm00001d011825 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable gamma-secretase subunit PEN-2
Sequence

ATGGAGGCGAGGGTTGCAGGAGTGCCCGAAGACGAAGAGTCCGGCCTCCTCCCCCGCCCG
TCCGCAGCCGGCCGACGGCCGTCCTCTCGCGGTGCCCGCTTCCCGCCTCCACCGGCAGCC
TGGGCGACGGTGGACGGCCCCCTCGGGCTTCCGCTGGAGGACGCGGAGGGCCACGCCCGC
CGCTTCTTCATGTGGGGTTTCGCGTGCCTCCCCTTCCTCTGGGCCATCAACTGCTGCTAC
TTCTGGCCCGTCCTCCGCTCGTCGGTCGCCTCCTCGCCCGCCGCCTTCGCCCCCATCCGC
CCCTATGTTGTGCGGTCGGCAATTGGCTTCACCATCTTCTCCGTTGTTCTGGTCACCTGG
GCCACGACCTTCGTCGTCGGAGGCGAGCGGTTATTTGGGCCAGTGTGGAATGATCTTGTG
ATGTACAATGTCGCCGACAAGCTTGGCATCTCTGGATTCATGGGATGA

Peptide Sequence

PEP ID

Zm00001d011825_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:162158586:162160692:-1 gene:Zm00001d011825 transcript:Zm00001d011825_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable gamma-secretase subunit PEN-2
Sequence

MEARVAGVPEDEESGLLPRPSAAGRRPSSRGARFPPPPAAWATVDGPLGLPLEDAEGHAR
RFFMWGFACLPFLWAINCCYFWPVLRSSVASSPAAFAPIRPYVVRSAIGFTIFSVVLVTW
ATTFVVGGERLFGPVWNDLVMYNVADKLGISGFMG

Transcript Sequence

Transcript ID

Zm00001d011825_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:162158586:162160692:-1 gene:Zm00001d011825 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable gamma-secretase subunit PEN-2
Sequence

AAAAGCAACGACAATTACAAAAGAGAGTAAAAATAAAGTAACCTAAAACTCGGAGGAAAG
CAGAAGGGGAAGAGTCAGCAATGGAGGCGAGGGTTGCAGGAGTGCCCGAAGACGAAGAGT
CCGGCCTCCTCCCCCGCCCGTCCGCAGCCGGCCGACGGCCGTCCTCTCGCGGTGCCCGCT
TCCCGCCTCCACCGGCAGCCTGGGCGACGGTGGACGGCCCCCTCGGGCTTCCGCTGGAGG
ACGCGGAGGGCCACGCCCGCCGCTTCTTCATGTGGGGTTTCGCGTGCCTCCCCTTCCTCT
GGGCCATCAACTGCTGCTACTTCTGGCCCGTCCTCCGCTCGTCGGTCGCCTCCTCGCCCG
CCGCCTTCGCCCCCATCCGCCCCTATGTTGTGCGGTCGGCAATTGGCTTCACCATCTTCT
CCGTTGTTCTGGTCACCTGGGCCACGACCTTCGTCGTCGGAGGCGAGCGGTTATTTGGGC
CAGTGTGGAATGATCTTGTGATGTACAATGTCGCCGACAAGCTTGGCATCTCTGGATTCA
TGGGATGAGCCTGCGATGTCTCCCTCGCTTCAGCTGGGCTCGCTTCACCCAAGCGTGGAA
CGATCTATTCCATCCATCTCCCTAGGGATTACCACTGTCTCATGTACTTTATTGTTGTTA
TTATTATTGACAGACTGACTGGTCAGAACAATGTCTAGCATGGCTAGCTCATGTTATAGA
AGGAATATGGATCGATGAAAACGATGATAAATGGAACTCAATCTGATGGACAAATTTGTG
TGTGTGTGTGTGTGTTGCTAGACATCCTGGGATGCATTTTGACATAGTATGACGTTGCAC
CGAGCAGTGTGCTGTGT