Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011805_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:161834426:161839733:-1 gene:Zm00001d011805 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative regulator of chromosome condensation (RCC1) family protein

Sequence

ATGCACACTAAAGGGGCTTCTTCAGATGCCATCAGAGTTAGCACCTCTAGTGCCCCCAGC
ACATCGAGCCATGGTTCTGCACAAGATGACTATGATTCCTCTGGGGATGTGTACGTGTGG
GGTGAAGTCATTTGTGACAACACTGTAAGAGTTGGTCCTGATACAGTAATCAGGTCTACC
GCTAAGGCTGATTTTCTATTGCCTAAGCCCCTGGAGTCCAAGCTAGTTCTTGATGTGTAC
CATGTGGATTGTGGGGTCAAGCACGCTGCTTTGGTCACAAAGAATGGGGAAGTGTTTACA
TGGGGTGAGGAATCTGGAGGACGTCTTGGCCATGGATCAAGGGAGGACTCTGTGCACCCT
CGCCTAGTTGAGTCATTAGCTATTTGTAATGTGGACATTGTTGCTTGTGGGGAGTTCCAC
ACCTGTGCTGTGACAACATCTGGGGAACTTTACACCTGGGGTGATGGAACACATAATATT
GGACTTCTAGGCAATGGTACCGATGTAAGCCACTGGATTCCTAAAAGAATTTCAGGAGTA
CTGGAGGGTCATCAAGTTGCGTATGTTTCTTGTGGGACCTGGCATACAGCCTTGGTTACG
TCGAGGGGACAGCTATTTACGTTTGGTGATGGTACATTCGGAGTTTTAGGACATGGAAAC
CGCGAGAGTTTTTCGTGTCCAAGGGAGGTAGAATCTTTATCGGGGTTGAAAACAATTGCT
GTGGCTTGTGGTGTATGGCACACGGCAGCTGTTGTAGAAGTTATAGTCACCCAATCCAGT
TCAAGTATGTCTTCTGGAAAGCTCTTCACATGGGGAGATGGTGACAAACATCGGCTTGGT
CATGGTGACAAGGAACCAAAACTTAAGCCTACGTGTGTGGCTTCACTTATTGATTATGAC
TTCTGCAGGATAGCATGTGGTCATAGTCTTACGGTAGGACTGACAACATCTGGACAGGTT
CTGAGCATGGGTAATACTGTCTATGGTCAGCTTGGGAATCCTCGTTCAGATGGTAAACTT
CCATGCTTAATTGAAGATATCATGGGTGAACATGTTGTCCAAGTTGCATGTGGTTCCTAC
CATGTTGCAGTCTTAACAAATAAGAGTGAGGTTTTTACATGGGGAAAGGGGGCCAATGGA
AGACTGGGTCATGGAGACGTAGAGGATAGAAAAATACCTACACTGGTTGAATCATTGAGA
GACAGGGCTGTTAGGCACATAGCTTGTGGTTCAAACTTCACTTCAGCTATCTGTCAACAT
AAGTGGGTTTCTGGAGCTGAGCAGTCGCAATGTGCCTCATGTCGGCAACCATTTGGGTTC
ACCAGGAAGAGGCATAATTGCCATAATTGTGGTCTTGTCCATTGTAATGCGTGCACCTCA
CATAAGGTCCTGAGAGCAGCATTGGCTCCTAATCCTGCAAAACCATACCGTGTTTGTGAT
TCATGTTTTATGAAATTGAACAGTGCAGCATACTCAAGTACAATTAATAAGAAGAAAGAG
GTTGTGCCTCGCCATTCTGGTGAAAGCAACCATGATGCTAAATTAGCTAGAGCAATTGTG
CCCAGCAATTTGGATATGATTAGAAGTTTGGACAGCAAGGCAGCAAAACAAGGGAAGAAA
ACTGATGCACTGTCATTCCTTCGGACTCCCCAAATGAGTTCGCTTCTTCAGCTAAGAGAT
ATCACTTTATCTGGTGGAATTGATCTGAACAAGTCAGTTCCAAGAGCAGTTCGCACATCA
GTCCGATCATTGAACTCATCTAGGGCTGTTTCCCCTTTCTCTCGCAAGCCTAGTCCACCA
CGCTCAACCACACCAGTCCCAACAACTCATGGTCTTTCAATTGCTAAAACTGCTGCTGAT
AGTCTTGCAAAAACTAATGAGATGTTAAGTCAAGAGGTTGAAAGACTCCGTGCACAGGTT
GACAATCTAAGGCGCCGTTGCGAGCTTCAAGAACTTGAGTTGCAGAAATCAGCAAAGAAA
GTACAAGAAGCCATGTCAATGGTTTCAGAGGAATCCGCAAAATCTAAAGCTGCTAAGGAA
GTAATAAAGTCCTTAACATCACAGCTCAAGGATATGGCTGAAAGACTACCTCCAGATCAG
GGAGCCTATGATGGTAGCGAAGCAAAACAAGCACATGTTCCAAATGGCATTGAGATGTAT
GCTTCTATTTACACTAGCATGAATGGTATTCATCAGCCACGAAATGAGTCTGTCAGTGCC
CTAAGCACGCCTGGCCTGCATATTGGACGATCATCGCACCCAAATGGAATCTCAAATCAT
CATCAATCACCAGGAAGTATTACTGAAAACAGTGAAGTGAGTGCTCACACCCATAGGGTT
TCAGGTCCTCCCGACGTTGAAAATCCGAATCGAAGGGGACATAGCAGTAGTGACGAGATG
CTCAGTGCAAGTAGTAGAGCAGACGATAGTAGCAGCAGGGACGCTAGATCCCTTTTGAAT
GGTGAGGATGGTTACAAATCTCGGAGTGCAGTATCTTTGCCCAGCAACCAAGTTCAGGCT
GAGTGGATTGAGCAGTATGAACCAGGTGTATACATAACACTGACAACTCTTCGTGATGGG
ACCCGAGATCTAAAGCGTGTACGCTTCAGTCGAAGGCGTTTTGGGGAGCATCAGGCGGAG
AGCTGGTGGAACGAGAACCGCGACAAGGTCTATGAGAAGTACAATGTAAGGAGCTCCGAA
CGAGTCTCGTCGGCATCATCGATCCGGTCAGGTCGATGA

Peptide Sequence

PEP ID

Zm00001d011805_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:161834426:161839733:-1 gene:Zm00001d011805 transcript:Zm00001d011805_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative regulator of chromosome condensation (RCC1) family protein

Sequence

MHTKGASSDAIRVSTSSAPSTSSHGSAQDDYDSSGDVYVWGEVICDNTVRVGPDTVIRST
AKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHP
RLVESLAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGV
LEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIA
VACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYD
FCRIACGHSLTVGLTTSGQVLSMGNTVYGQLGNPRSDGKLPCLIEDIMGEHVVQVACGSY
HVAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTSAICQH
KWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSHKVLRAALAPNPAKPYRVCD
SCFMKLNSAAYSSTINKKKEVVPRHSGESNHDAKLARAIVPSNLDMIRSLDSKAAKQGKK
TDALSFLRTPQMSSLLQLRDITLSGGIDLNKSVPRAVRTSVRSLNSSRAVSPFSRKPSPP
RSTTPVPTTHGLSIAKTAADSLAKTNEMLSQEVERLRAQVDNLRRRCELQELELQKSAKK
VQEAMSMVSEESAKSKAAKEVIKSLTSQLKDMAERLPPDQGAYDGSEAKQAHVPNGIEMY
ASIYTSMNGIHQPRNESVSALSTPGLHIGRSSHPNGISNHHQSPGSITENSEVSAHTHRV
SGPPDVENPNRRGHSSSDEMLSASSRADDSSSRDARSLLNGEDGYKSRSAVSLPSNQVQA
EWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAESWWNENRDKVYEKYNVRSSE
RVSSASSIRSGR

Transcript Sequence

Transcript ID

Zm00001d011805_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:161834426:161839733:-1 gene:Zm00001d011805 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative regulator of chromosome condensation (RCC1) family protein

Sequence

AGGGCAGGAGAGGACTGAGAGCGAGGCCGAGGACCAAGAAGACCGACCAAGCGTGAAGCG
CCCTTTGTCTCGACGCCGCTGCCGCCGCAAAGACTCGCGATTCGCGAGAGAAGCGGCCGC
AGCAGCCGAGCTTCTCTCGCCCCCGCCGCTCCTCTCCCACTCCACCACCGCGCTTCAGAT
TCCACAGGTGAGAGGCAAAAGGCAAGAGCCGAAGAAGCGAGCCGAGGCGCCACCGCTCTC
CCGCCTGCTTCCTCCGCCGGCCCGGCCGTCCCGGCCGGCGAGCGAGAGCCAACGAACTGC
GGGCCGAAGCGAACTGCCGGGGCCACCGTGGGGCGGAGATCCGCACCGGACCTCCCACCG
GTTCCTGGTTGTGGAATACCTGGCCAACCCCTTTTTCTATGTGTCGCTGCTGGTCATAAA
ACCCAATAGTTACTTGGAGATCACATGCAACAAATATGCACACTAAAGGGGCTTCTTCAG
ATGCCATCAGAGTTAGCACCTCTAGTGCCCCCAGCACATCGAGCCATGGTTCTGCACAAG
ATGACTATGATTCCTCTGGGGATGTGTACGTGTGGGGTGAAGTCATTTGTGACAACACTG
TAAGAGTTGGTCCTGATACAGTAATCAGGTCTACCGCTAAGGCTGATTTTCTATTGCCTA
AGCCCCTGGAGTCCAAGCTAGTTCTTGATGTGTACCATGTGGATTGTGGGGTCAAGCACG
CTGCTTTGGTCACAAAGAATGGGGAAGTGTTTACATGGGGTGAGGAATCTGGAGGACGTC
TTGGCCATGGATCAAGGGAGGACTCTGTGCACCCTCGCCTAGTTGAGTCATTAGCTATTT
GTAATGTGGACATTGTTGCTTGTGGGGAGTTCCACACCTGTGCTGTGACAACATCTGGGG
AACTTTACACCTGGGGTGATGGAACACATAATATTGGACTTCTAGGCAATGGTACCGATG
TAAGCCACTGGATTCCTAAAAGAATTTCAGGAGTACTGGAGGGTCATCAAGTTGCGTATG
TTTCTTGTGGGACCTGGCATACAGCCTTGGTTACGTCGAGGGGACAGCTATTTACGTTTG
GTGATGGTACATTCGGAGTTTTAGGACATGGAAACCGCGAGAGTTTTTCGTGTCCAAGGG
AGGTAGAATCTTTATCGGGGTTGAAAACAATTGCTGTGGCTTGTGGTGTATGGCACACGG
CAGCTGTTGTAGAAGTTATAGTCACCCAATCCAGTTCAAGTATGTCTTCTGGAAAGCTCT
TCACATGGGGAGATGGTGACAAACATCGGCTTGGTCATGGTGACAAGGAACCAAAACTTA
AGCCTACGTGTGTGGCTTCACTTATTGATTATGACTTCTGCAGGATAGCATGTGGTCATA
GTCTTACGGTAGGACTGACAACATCTGGACAGGTTCTGAGCATGGGTAATACTGTCTATG
GTCAGCTTGGGAATCCTCGTTCAGATGGTAAACTTCCATGCTTAATTGAAGATATCATGG
GTGAACATGTTGTCCAAGTTGCATGTGGTTCCTACCATGTTGCAGTCTTAACAAATAAGA
GTGAGGTTTTTACATGGGGAAAGGGGGCCAATGGAAGACTGGGTCATGGAGACGTAGAGG
ATAGAAAAATACCTACACTGGTTGAATCATTGAGAGACAGGGCTGTTAGGCACATAGCTT
GTGGTTCAAACTTCACTTCAGCTATCTGTCAACATAAGTGGGTTTCTGGAGCTGAGCAGT
CGCAATGTGCCTCATGTCGGCAACCATTTGGGTTCACCAGGAAGAGGCATAATTGCCATA
ATTGTGGTCTTGTCCATTGTAATGCGTGCACCTCACATAAGGTCCTGAGAGCAGCATTGG
CTCCTAATCCTGCAAAACCATACCGTGTTTGTGATTCATGTTTTATGAAATTGAACAGTG
CAGCATACTCAAGTACAATTAATAAGAAGAAAGAGGTTGTGCCTCGCCATTCTGGTGAAA
GCAACCATGATGCTAAATTAGCTAGAGCAATTGTGCCCAGCAATTTGGATATGATTAGAA
GTTTGGACAGCAAGGCAGCAAAACAAGGGAAGAAAACTGATGCACTGTCATTCCTTCGGA
CTCCCCAAATGAGTTCGCTTCTTCAGCTAAGAGATATCACTTTATCTGGTGGAATTGATC
TGAACAAGTCAGTTCCAAGAGCAGTTCGCACATCAGTCCGATCATTGAACTCATCTAGGG
CTGTTTCCCCTTTCTCTCGCAAGCCTAGTCCACCACGCTCAACCACACCAGTCCCAACAA
CTCATGGTCTTTCAATTGCTAAAACTGCTGCTGATAGTCTTGCAAAAACTAATGAGATGT
TAAGTCAAGAGGTTGAAAGACTCCGTGCACAGGTTGACAATCTAAGGCGCCGTTGCGAGC
TTCAAGAACTTGAGTTGCAGAAATCAGCAAAGAAAGTACAAGAAGCCATGTCAATGGTTT
CAGAGGAATCCGCAAAATCTAAAGCTGCTAAGGAAGTAATAAAGTCCTTAACATCACAGC
TCAAGGATATGGCTGAAAGACTACCTCCAGATCAGGGAGCCTATGATGGTAGCGAAGCAA
AACAAGCACATGTTCCAAATGGCATTGAGATGTATGCTTCTATTTACACTAGCATGAATG
GTATTCATCAGCCACGAAATGAGTCTGTCAGTGCCCTAAGCACGCCTGGCCTGCATATTG
GACGATCATCGCACCCAAATGGAATCTCAAATCATCATCAATCACCAGGAAGTATTACTG
AAAACAGTGAAGTGAGTGCTCACACCCATAGGGTTTCAGGTCCTCCCGACGTTGAAAATC
CGAATCGAAGGGGACATAGCAGTAGTGACGAGATGCTCAGTGCAAGTAGTAGAGCAGACG
ATAGTAGCAGCAGGGACGCTAGATCCCTTTTGAATGGTGAGGATGGTTACAAATCTCGGA
GTGCAGTATCTTTGCCCAGCAACCAAGTTCAGGCTGAGTGGATTGAGCAGTATGAACCAG
GTGTATACATAACACTGACAACTCTTCGTGATGGGACCCGAGATCTAAAGCGTGTACGCT
TCAGTCGAAGGCGTTTTGGGGAGCATCAGGCGGAGAGCTGGTGGAACGAGAACCGCGACA
AGGTCTATGAGAAGTACAATGTAAGGAGCTCCGAACGAGTCTCGTCGGCATCATCGATCC
GGTCAGGTCGATGACCCCTCCTCCGTACCACACTACCCTGCAGTAGTCATCAGAAAACTT
CAAGTGGGAGCGCAGAGCCAAAGTCAGAGTGGCAAGGGTGCCGAGGAATTCTTTTTTGTC
CGTGTAATGTCGATAATTCTTGTTACTGTTGTTATGAAATTGAGTCAGTGGGACTTGTTA
GGTTGTCTTGTTCAGATGTAATGCACATAGAGTTGTGGAACACCGAAACATGTTGTAGGG
GGTGGGGCGGTAGCAGAGGGTGGACAGTAACAGTAGCGCGCCCAGCCCTCTACGGCCTAC
CCTTTTGAAAGCCTTGGTTGTAGCCAATGCAGCTAGCTGTAAAGAAGTGGCATTTTTTTT
TTGTCTCCAAAAGGTGTCACGCTTCACATTTTGGCTATATTGCATTTGATGACAT