Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011793_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:161710731:161711838:-1 gene:Zm00001d011793 gene_biotype:protein_coding transcript_biotype:protein_coding description:late embryogenesis abundant protein-related / LEA protein-related
Sequence

ATGGCTCCTGCCCGTCTGCTTCTGCAGTTGCTGGCTGCTATGTGCGCGGCGGCGGCGGCC
ACCCAGAAAGCTGATCCTGCGGCGCGCGGCTTGCGCCCGCTGCCATCCAACTACCGCGTG
CTCACCCAGGGAAGGTACAAGAGGAACCAGGAGCTGACGTGCCCGGACCCCAGGACGAAG
CAGCCAGGCTGCATGGTGAAGTGCGAGTCCCGCTGCCCCGACCAGTGCATCGTCGTCTGC
CCCGGCTGCAAGACCTACTGCATTTGCGACTTCTACCCTGGCATGTCGTGCGGCGACCCG
CGCTTCACGGGCGGCGACGGCAACACCTTCTACTTCCACGGCAGCAGGGACCGGGACTTC
TGCGTCTTCACCGACGCTGGCCTCCACATCAACGCGCACTTCATCGGCAACCACAACCCG
GCCACGAGCCGCGACTTCACCTGGATCCAGGCGCTGGGCATCCGCTTCCTCGCCGACCAC
CGCCTCTACGTGGGCGCCCAGAAGACGACCGCCAGGTGGGACAGCGACGTCGATCGCCTC
GAGCTGGCCTTCGACGGCGAGGCCGTGGCCATTCCGGCGCACACCGGCGCCGCGTGGCGG
CCCGCCGCGGCGCCTGCGCTCACCGTCACGAGGACGGCCGCAGCCAACGGCGTGAGGGTG
CGTCTGGAGGGGGTGCTGGACGTCGTGGCCAACGTCGTGCCCGTCAGCGAGGAGGACTCC
CGCATCCACGCCTACGGCGTGACGGAGGACGACAGGCTCGCGCACCTGGACCTGGGGTTC
AGGTTCTTCGGGCTCACCGACGACGTGCACGGCGTGCTCGGGCAGACCTACCGCTCCGAC
TACGTCAGCCGCCTCAGCGTGAGCTCTAAGATTCCTGTCATGGGCGGCGCGGCCGAGTAC
CTCTCCTCGGATATCTTCGCCACCGACTGCACCGTCGCAAAGTTCGGCGACGACCGTCGT
GCCGGCATCTCCATGCTCGCCTCTGCCGGGGCCTATTAA

Peptide Sequence

PEP ID

Zm00001d011793_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:161710731:161711838:-1 gene:Zm00001d011793 transcript:Zm00001d011793_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:late embryogenesis abundant protein-related / LEA protein-related
Sequence

MAPARLLLQLLAAMCAAAAATQKADPAARGLRPLPSNYRVLTQGRYKRNQELTCPDPRTK
QPGCMVKCESRCPDQCIVVCPGCKTYCICDFYPGMSCGDPRFTGGDGNTFYFHGSRDRDF
CVFTDAGLHINAHFIGNHNPATSRDFTWIQALGIRFLADHRLYVGAQKTTARWDSDVDRL
ELAFDGEAVAIPAHTGAAWRPAAAPALTVTRTAAANGVRVRLEGVLDVVANVVPVSEEDS
RIHAYGVTEDDRLAHLDLGFRFFGLTDDVHGVLGQTYRSDYVSRLSVSSKIPVMGGAAEY
LSSDIFATDCTVAKFGDDRRAGISMLASAGAY

Transcript Sequence

Transcript ID

Zm00001d011793_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:161710731:161711838:-1 gene:Zm00001d011793 gene_biotype:protein_coding transcript_biotype:protein_coding description:late embryogenesis abundant protein-related / LEA protein-related
Sequence

GGACGCCATGGCTCCTGCCCGTCTGCTTCTGCAGTTGCTGGCTGCTATGTGCGCGGCGGC
GGCGGCCACCCAGAAAGCTGATCCTGCGGCGCGCGGCTTGCGCCCGCTGCCATCCAACTA
CCGCGTGCTCACCCAGGGAAGGTACAAGAGGAACCAGGAGCTGACGTGCCCGGACCCCAG
GACGAAGCAGCCAGGCTGCATGGTGAAGTGCGAGTCCCGCTGCCCCGACCAGTGCATCGT
CGTCTGCCCCGGCTGCAAGACCTACTGCATTTGCGACTTCTACCCTGGCATGTCGTGCGG
CGACCCGCGCTTCACGGGCGGCGACGGCAACACCTTCTACTTCCACGGCAGCAGGGACCG
GGACTTCTGCGTCTTCACCGACGCTGGCCTCCACATCAACGCGCACTTCATCGGCAACCA
CAACCCGGCCACGAGCCGCGACTTCACCTGGATCCAGGCGCTGGGCATCCGCTTCCTCGC
CGACCACCGCCTCTACGTGGGCGCCCAGAAGACGACCGCCAGGTGGGACAGCGACGTCGA
TCGCCTCGAGCTGGCCTTCGACGGCGAGGCCGTGGCCATTCCGGCGCACACCGGCGCCGC
GTGGCGGCCCGCCGCGGCGCCTGCGCTCACCGTCACGAGGACGGCCGCAGCCAACGGCGT
GAGGGTGCGTCTGGAGGGGGTGCTGGACGTCGTGGCCAACGTCGTGCCCGTCAGCGAGGA
GGACTCCCGCATCCACGCCTACGGCGTGACGGAGGACGACAGGCTCGCGCACCTGGACCT
GGGGTTCAGGTTCTTCGGGCTCACCGACGACGTGCACGGCGTGCTCGGGCAGACCTACCG
CTCCGACTACGTCAGCCGCCTCAGCGTGAGCTCTAAGATTCCTGTCATGGGCGGCGCGGC
CGAGTACCTCTCCTCGGATATCTTCGCCACCGACTGCACCGTCGCAAAGTTCGGCGACGA
CCGTCGTGCCGGCATCTCCATGCTCGCCTCTGCCGGGGCCTATTAA