Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011792_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:8:161705871:161709019:1 gene:Zm00001d011792 gene_biotype:protein_coding transcript_biotype:protein_coding description:UDP-D-apiose/UDP-D-xylose synthase 2
Sequence

ATGTCGTCGTCTCTCTCTCCAGCGGCGGCAGCCGCGCCCCTGGATCTGGACGGCAACTCC
GTCGCGCCCCTCACCATCTGCATGATTGGTGCCGGCGGCTTCATCGGCTCCCACCTCTGC
GAGAAGCTCATGGCCGAGACGCGCCATGTCGTCCTCGCCGTCGACGTATACTGCGATAAG
ATCCGCCACCTCGTCGACCCCGCGCCGCCGCACCTCGCGGGGCGCATCTCCTTCCACCGC
CTCAACATCAAGAATGACTCCAGGCTCGAGGGCCTCATCAAGATGGCCGATCTGACCATC
AACCTGGCGGCTATCTGCACGCCGGCGGACTACAACACGCGCCCCCTCGACACCATCTAC
AGCAACTTCATCGATGCACTCCCAGTGGTCAAGTACTGCTCCGAGAACAGCAAGCGTCTC
ATCCACTTCTCCACGTGCGAGGTCTATGGCAAGACCATCGGCAGCTTCCTCCCCAAAGAC
CACCCGCTCCGCAAGGAACCTGAATTTTATGTTCTGAAAGAAGATGAGTCACCCTGTATT
TTTGGTCCAATCGTGAAACAACGATGGTCCTATGCTTGCGCGAAGCAACTTATTGAGAGA
CTTATATTTGCTGAGGGTGCAGAAAATGGCCTTGAATTCACAATCGTGAGACCTTTTAAT
TGGATTGGGCCAAGGATGGATTTCATTCCTGGTGTCGATGGTCCTAGTGAGGGTGTACCC
CGGGTGCTGGCTTGCTTCAGTAACAATCTGCTCCGCCGAGAGCCTTTGAAGCTTGTCGAT
GGGGGCCAGTCTCAGAGAACCTTTGTATACATCAAGGATGCCATCGAAGCTGTTGTGCTG
ATGATTGAAAATCCTGCTCGAGCCAATGGTCACATCTTCAATGTTGGGAATCCTGACAAT
GAGGTTACGGTTAGGGAGTTGGCCCAAATGATGACAGAGGTCTATGCAAACGTCTCAGGA
GAGGCGCCGCTGGATGAGCCTATGATCGACGTGAGTTCGAGTCAGTTCTACGGTGAAGGA
TACGATGACAGTGATAAGAGAATTCCTGACATGACTATAATCAACAAGCAGCTAGGTATG
ATGTGCATGGTGGTCTGTGGGTATGCTTGTTTTCCCTAA

Peptide Sequence

PEP ID

Zm00001d011792_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:8:161705871:161709019:1 gene:Zm00001d011792 transcript:Zm00001d011792_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:UDP-D-apiose/UDP-D-xylose synthase 2
Sequence

MSSSLSPAAAAAPLDLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDK
IRHLVDPAPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY
SNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCI
FGPIVKQRWSYACAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVP
RVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVVLMIENPARANGHIFNVGNPDN
EVTVRELAQMMTEVYANVSGEAPLDEPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGM
MCMVVCGYACFP

Transcript Sequence

Transcript ID

Zm00001d011792_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:161705871:161709019:1 gene:Zm00001d011792 gene_biotype:protein_coding transcript_biotype:protein_coding description:UDP-D-apiose/UDP-D-xylose synthase 2
Sequence

GAGCCGCGCGCATTCCCCGTCCCGTGCCACCGGACCAGGGGAAGGAGGACACACATGTCG
TCGTCTCTCTCTCCAGCGGCGGCAGCCGCGCCCCTGGATCTGGACGGCAACTCCGTCGCG
CCCCTCACCATCTGCATGATTGGTGCCGGCGGCTTCATCGGCTCCCACCTCTGCGAGAAG
CTCATGGCCGAGACGCGCCATGTCGTCCTCGCCGTCGACGTATACTGCGATAAGATCCGC
CACCTCGTCGACCCCGCGCCGCCGCACCTCGCGGGGCGCATCTCCTTCCACCGCCTCAAC
ATCAAGAATGACTCCAGGCTCGAGGGCCTCATCAAGATGGCCGATCTGACCATCAACCTG
GCGGCTATCTGCACGCCGGCGGACTACAACACGCGCCCCCTCGACACCATCTACAGCAAC
TTCATCGATGCACTCCCAGTGGTCAAGTACTGCTCCGAGAACAGCAAGCGTCTCATCCAC
TTCTCCACGTGCGAGGTCTATGGCAAGACCATCGGCAGCTTCCTCCCCAAAGACCACCCG
CTCCGCAAGGAACCTGAATTTTATGTTCTGAAAGAAGATGAGTCACCCTGTATTTTTGGT
CCAATCGTGAAACAACGATGGTCCTATGCTTGCGCGAAGCAACTTATTGAGAGACTTATA
TTTGCTGAGGGTGCAGAAAATGGCCTTGAATTCACAATCGTGAGACCTTTTAATTGGATT
GGGCCAAGGATGGATTTCATTCCTGGTGTCGATGGTCCTAGTGAGGGTGTACCCCGGGTG
CTGGCTTGCTTCAGTAACAATCTGCTCCGCCGAGAGCCTTTGAAGCTTGTCGATGGGGGC
CAGTCTCAGAGAACCTTTGTATACATCAAGGATGCCATCGAAGCTGTTGTGCTGATGATT
GAAAATCCTGCTCGAGCCAATGGTCACATCTTCAATGTTGGGAATCCTGACAATGAGGTT
ACGGTTAGGGAGTTGGCCCAAATGATGACAGAGGTCTATGCAAACGTCTCAGGAGAGGCG
CCGCTGGATGAGCCTATGATCGACGTGAGTTCGAGTCAGTTCTACGGTGAAGGATACGAT
GACAGTGATAAGAGAATTCCTGACATGACTATAATCAACAAGCAGCTAGGTATGATGTGC
ATGGTGGTCTGTGGGTATGCTTGTTTTCCCTAACTAATGGTCAGATGCCTACTGGATTAT
GTAGGTTGGAACCCAAAGACACCTCTCAAGGATCTGCTGGAGACAACATTGACGTACCAG
CACAAGACATACAAAGAAGCTGTGAAGAGGCAAATGTCGCAGGCTTCAGCAACAAGTTAA
GTTGGCGCTGGCTGGGGACGGCTCCTCGTTTAGAGCCCTAGTCGCAGCAGCTGTTTCGCA
AGTCAGAATACATATACGCCGGTAATCGTTCTGTTTGAGGCCCTAGACGCGCCCATGTTT
TGTCTGCTACCAAGGGATGTTATCCTATTGTGATATAACTACTACCTGTGTTTGGTTGCT
CCTAGTTTTTTTTCTTGCAATTATATGTA