Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011787_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:161553753:161554910:-1 gene:Zm00001d011787 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine protease XCP1
Sequence	ATGCATGCGAAGATGACGAAGCCCGCAGCCATCGTTGTTGCTGCTATCGCCGTCCTCTCC GTCAGCCTGCTGGCTGGGTCGTCGTGCCTTGCCCTTGCGCGGCCCAGCGGCGACTTCTCC ATCGTGGGCTACTCAGAGGAGGACCTGTCGTCGCACGAGAGCCTGGCGGAGCTGTTCGAG CGCTGGCTGTCCCGCCACCGCAGGGCGTACGCCAGCCTGGAGGAGAAGCTCCGGCGGTTC CAGGTGTTCAAGGACAACCTGCACCACATCGACGAGACCAACCGCAAGGTGAGCAGCTAC TGGCTGGGCCTCAACGAGTTCGCCGACCTCACGCACGACGAGTTCAAGGCCACCTACCTC GGCCTACGGAGCAGTGTTGGCGATGGTGGTAGTGGTATCGATGACGACGACGAGCCGGAG GAGGAGGAGGGCTACGAGGGTGTGGACGGGGCGAGCCTCCCCAAGTCGGTGGACTGGCGG AGCAAGGGCGCGGTGACGGGGGTAAAGAACCAGGGCCAGTGCGGCAGCTGCTGGGCCTTC TCCACGGTGGCCGCCGTCGAGGGCATCAACCAGATCGTCACGGGCAACCTCACGGCGCTG TCGGAGCAGGAGCTCATCGACTGCGACACGGACGGCAACAACGGCTGCAACGGCGGCCTC ATGGACTACGCCTTCTCCTACATCGCACACAACGGCGGCCTCCACACGGAGGAGGCCTAC CCGTACCTCATGGAGGAAGGCACCTGCCAGCGCAGCAGCAGCAGCGAGAAGAAGTGGCCG GGATCGTCGGAGGACGCCAACGACGATGCCGCGGTGGTCACCATCTCCGGGTACGAGGAC GTGCCGAGGAACAACGAGCAGGCGCTGCTCAAAGCGCTGGCGCAACAGCCCGTCAGCGTC GCCATCGAGGCCTCCGGCAGGAACTTCCAGTTCTACAGCGGCGGCGTCTTCGATGGGCCC TGCGGCACGCAGCTGGACCACGGGGTAGCGGCCGTCGGCTACGGGACGGCGGCCAAGGGC CATGACTACATCATCGTCAAGAACTCGTGGGGGCCCAGCTGGGGCGAGAAGGGGTACATC CGCATGAGGAGGGGCACCGGCAAGCGCCAGGGCCTCTGCGGCATCAACAAGATGGCCTCC TACCCAACCAAGAACTGA

Peptide Sequence

PEP ID	Zm00001d011787_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:161553753:161554910:-1 gene:Zm00001d011787 transcript:Zm00001d011787_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine protease XCP1
Sequence	MHAKMTKPAAIVVAAIAVLSVSLLAGSSCLALARPSGDFSIVGYSEEDLSSHESLAELFE RWLSRHRRAYASLEEKLRRFQVFKDNLHHIDETNRKVSSYWLGLNEFADLTHDEFKATYL GLRSSVGDGGSGIDDDDEPEEEEGYEGVDGASLPKSVDWRSKGAVTGVKNQGQCGSCWAF STVAAVEGINQIVTGNLTALSEQELIDCDTDGNNGCNGGLMDYAFSYIAHNGGLHTEEAY PYLMEEGTCQRSSSSEKKWPGSSEDANDDAAVVTISGYEDVPRNNEQALLKALAQQPVSV AIEASGRNFQFYSGGVFDGPCGTQLDHGVAAVGYGTAAKGHDYIIVKNSWGPSWGEKGYI RMRRGTGKRQGLCGINKMASYPTKN

Transcript Sequence

Transcript ID	Zm00001d011787_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:161553753:161554910:-1 gene:Zm00001d011787 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine protease XCP1
Sequence	ATGCATGCGAAGATGACGAAGCCCGCAGCCATCGTTGTTGCTGCTATCGCCGTCCTCTCC GTCAGCCTGCTGGCTGGGTCGTCGTGCCTTGCCCTTGCGCGGCCCAGCGGCGACTTCTCC ATCGTGGGCTACTCAGAGGAGGACCTGTCGTCGCACGAGAGCCTGGCGGAGCTGTTCGAG CGCTGGCTGTCCCGCCACCGCAGGGCGTACGCCAGCCTGGAGGAGAAGCTCCGGCGGTTC CAGGTGTTCAAGGACAACCTGCACCACATCGACGAGACCAACCGCAAGGTGAGCAGCTAC TGGCTGGGCCTCAACGAGTTCGCCGACCTCACGCACGACGAGTTCAAGGCCACCTACCTC GGCCTACGGAGCAGTGTTGGCGATGGTGGTAGTGGTATCGATGACGACGACGAGCCGGAG GAGGAGGAGGGCTACGAGGGTGTGGACGGGGCGAGCCTCCCCAAGTCGGTGGACTGGCGG AGCAAGGGCGCGGTGACGGGGGTAAAGAACCAGGGCCAGTGCGGCAGCTGCTGGGCCTTC TCCACGGTGGCCGCCGTCGAGGGCATCAACCAGATCGTCACGGGCAACCTCACGGCGCTG TCGGAGCAGGAGCTCATCGACTGCGACACGGACGGCAACAACGGCTGCAACGGCGGCCTC ATGGACTACGCCTTCTCCTACATCGCACACAACGGCGGCCTCCACACGGAGGAGGCCTAC CCGTACCTCATGGAGGAAGGCACCTGCCAGCGCAGCAGCAGCAGCGAGAAGAAGTGGCCG GGATCGTCGGAGGACGCCAACGACGATGCCGCGGTGGTCACCATCTCCGGGTACGAGGAC GTGCCGAGGAACAACGAGCAGGCGCTGCTCAAAGCGCTGGCGCAACAGCCCGTCAGCGTC GCCATCGAGGCCTCCGGCAGGAACTTCCAGTTCTACAGCGGCGGCGTCTTCGATGGGCCC TGCGGCACGCAGCTGGACCACGGGGTAGCGGCCGTCGGCTACGGGACGGCGGCCAAGGGC CATGACTACATCATCGTCAAGAACTCGTGGGGGCCCAGCTGGGGCGAGAAGGGGTACATC CGCATGAGGAGGGGCACCGGCAAGCGCCAGGGCCTCTGCGGCATCAACAAGATGGCCTCC TACCCAACCAAGAACTGA