Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011771_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:161288497:161289891:1 gene:Zm00001d011771 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-GATA-transcription factor 17 description:GATA zinc finger family protein

Sequence

ATGGGGATGGAGATAGACATGGAGACGTATCCCAATCTTAATACTTCCCCCTCGGCCGCC
ACTGCCTCAGGCGACGCCAAGGCCTGCGCCAACTGCCACACCACCAAGACGTCGCTCTGG
CGCGGAGGACCGGAGGGCCCCAAGTCCCTCTGCAACGCCTGCGGCATCCGCTACCGCAAG
AGGAGGCAGGCGATCGGTCTCGACGCAGGAGCGGCCGCCGCCGCCAACTCACAGCAAGAT
CTGCAGCAGCCAAAGAAGAAGGCCGCCGTCGATCCGCAGCAGCAGGACCAGCATCAGCTG
AGAAAGAAGACAACAGCGGTCGCTAATCCACAGCAGGATCGGCATCAGCCGAGAAAGAGA
GCAGCTGCCGCTGCCGCTGCCACCGATCCACAGCACACCAGCATCACCAAGAAAGACACG
GACAAGAAGGATCAGCAAGTCACCGTGGATCTCCACGTGGTGGGGTTCGGCAAGGAGGCG
ACGTTCAAGCAGCGCCGCCGGATGCGCCACAATAAGTGCATGAGCGAGGAGGAGAGGGCC
GCTGTTCTTCTTATGGCGCTCTCATCGGGCGTCATATATGCATCATGA

Peptide Sequence

PEP ID

Zm00001d011771_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:161288497:161289891:1 gene:Zm00001d011771 transcript:Zm00001d011771_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-GATA-transcription factor 17 description:GATA zinc finger family protein

Sequence

MGMEIDMETYPNLNTSPSAATASGDAKACANCHTTKTSLWRGGPEGPKSLCNACGIRYRK
RRQAIGLDAGAAAAANSQQDLQQPKKKAAVDPQQQDQHQLRKKTTAVANPQQDRHQPRKR
AAAAAAATDPQHTSITKKDTDKKDQQVTVDLHVVGFGKEATFKQRRRMRHNKCMSEEERA
AVLLMALSSGVIYAS

Transcript Sequence

Transcript ID

Zm00001d011771_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:161288497:161289891:1 gene:Zm00001d011771 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-GATA-transcription factor 17 description:GATA zinc finger family protein

Sequence

ATCGGCAACGCCGTCACTGGCATTATCCTACCTTTGGTTTCGCACTCGCCCATCACCCAC
CTCTGACTGTCGTATCGAGCTAAAACCCTTGCTCTCCCTGCCCGCCCATTTTCCTTTCCC
CTTGGCATTCGGCTCCACTGCTTCTCCGGCGAATTGGATCGGCGATCCATCGTCGTCGGA
TCGCAACTCCTGACTAGCTTGTTGCTGCAGGATCGTTATCCGCCGCGCCTGCTGCTTGGG
TTTGTTTTCCCTGCCCACGGAAATGGGGATGGAGATAGACATGGAGACGTATCCCAATCT
TAATACTTCCCCCTCGGCCGCCACTGCCTCAGGCGACGCCAAGGCCTGCGCCAACTGCCA
CACCACCAAGACGTCGCTCTGGCGCGGAGGACCGGAGGGCCCCAAGTCCCTCTGCAACGC
CTGCGGCATCCGCTACCGCAAGAGGAGGCAGGCGATCGGTCTCGACGCAGGAGCGGCCGC
CGCCGCCAACTCACAGCAAGATCTGCAGCAGCCAAAGAAGAAGGCCGCCGTCGATCCGCA
GCAGCAGGACCAGCATCAGCTGAGAAAGAAGACAACAGCGGTCGCTAATCCACAGCAGGA
TCGGCATCAGCCGAGAAAGAGAGCAGCTGCCGCTGCCGCTGCCACCGATCCACAGCACAC
CAGCATCACCAAGAAAGACACGGACAAGAAGGATCAGCAAGTCACCGTGGATCTCCACGT
GGTGGGGTTCGGCAAGGAGGCGACGTTCAAGCAGCGCCGCCGGATGCGCCACAATAAGTG
CATGAGCGAGGAGGAGAGGGCCGCTGTTCTTCTTATGGCGCTCTCATCGGGCGTCATATA
TGCATCATGAGAAGTCCGCTCTCCTGATTCCAACTGTTCCGTTGCAGATGGAGATATAGA
TCCGCCTTCCCTTCCATTCATCATCCCCCTGCTTCCTATCCCTATCTTCCTCTTCCTCCT
AGGTCATCCATCAGTAGTACTGTAGTGATAGGTCTAGCTAGACTCTCATCAATCAATCTA
TCGCTTGACTCATCAGTCAATCTATCTCTCTATCTTGAAAAATTAATCCATCCTCTATCT
CTCTCTCTCTCTCTCTCTCTTTTAGTTTTTTTGGGCAAGTTAGTAGTAGCAATAGCGAAG
CCGGACAAGACAAATCCATTCAGTCATGTGATGTACTTGCTCAGCTGTGTAATGTAGTAT
AATGCCGTTATGCAATGCAATGTTTACCTGACTGACT