Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011764_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:161071221:161074991:1 gene:Zm00001d011764 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:yucca8 description:Indole-3-pyruvate monooxygenase YUCCA2
Sequence	ATGGATCCTTGGAGTGAAAGTGAGGGCAAGAGAGCCCATGATCCTATCTTCAAATGTTTC AGCCAAAACCAAGGTCACCATCACTTCATGGAAAGGAGCACAGATGCTGCTGTTGCTCTC TCTGAGAGATGTAGATGCATCTGGGTTTCAGGTCCAATTATCGTGGGTGCAGGACCATCA GGGCTCGCTGCTGCTGCATGTCTCAAGGAGAAGGGAATCAGTAGCCTTATTCTTGAGCGC TCCAGATGCCTAGCTTCCCTCTGGCAGCTCAAGACATATGATCGTCTCAGCCTTCATCTT CCTCGGCAATTCTGTGAGCTTCCTCTCATGCCTTTCCCTGCCGACTATCCGATATATCCC TCAAAGCAGCAGTTTGTAGCCTACCTGGAGAGCTATGCTGCAAGTTTTGGCATATGTCCC ACATACAATCGCACAGTGGTGTGCGCAGAGTATGATGAACAGCTTCTGTTATGGCGTGTG AGGACGCAGACTTCTGACACAACGGGAGAGGAGGTGGAGTATGTATCCCGGTGGCTTATT GTGGCAACTGGTGAGAATGCTGAGGCCGTGCAGCCGGATATCGGTGGTCTACAAGAGTTC CCGGGAACAATCATGCACACCAGTGCATATAAAAGTGGCAGTGCATTCACTGGGAAGCGT GTTCTCGTTGTCGGGTGTGGAAACTCCGGGATGGAGGTGTGCCTAGACCTCTGCAACCAC AGTGCCGAGCCCCATATTGTTGTAAGAGATGCTGTACACATCTTGCCCAGGGAGATGCTT GGCCACTCCACCTTTGGTCTGTCAATGTGGCTCCTCAAGTGGCTCCCGGTCCACGTTGTG GACCGTGTTCTTCTGTGCATAGCGCGGGCCATGCTCGGGGATACTGCTCGGCTTGGGCTA AAGCGGCCGGCCTCTGGTCCTCTTCAGCTCAAGTCACTGTCTGGAAAGACCCCAGTTCTT GACGTCGGCACATTTGCAAAGATCAAGTCTGGAGATATCAAGGTACGACCTGCCGTAAGA CAGGTATCAGGAAGAGCGGTAGAATTTGCGGACGGTGAGTTGGAGGAGTTCGACGCCATT GTGCTTGCGACTGGCTACAAGAGCAATGTCCCCTTCTGGTTGAAGGACCGAGTGTTATTT TCTGAAAAAGATGGATTGCCAAGAAAAGCATTTCCGAACGGGTGGAAGGGTGAGAAGGGC CTGTACTCGGTTGGGTTCACCCGGCGTGGACTGATGGGCACCTCGGTCGATGCCAGGAGG GTTGCCCACGACGTCGAGCAGCAATGGCGGAAGGCCAAAGGGACGCATCGGGACGGCGTT CCTCTACCTCTGGTCGCTGTTGTTTACCATGGTGATGGGTTGTGA

Peptide Sequence

PEP ID	Zm00001d011764_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:161071221:161074991:1 gene:Zm00001d011764 transcript:Zm00001d011764_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:yucca8 description:Indole-3-pyruvate monooxygenase YUCCA2
Sequence	MDPWSESEGKRAHDPIFKCFSQNQGHHHFMERSTDAAVALSERCRCIWVSGPIIVGAGPS GLAAAACLKEKGISSLILERSRCLASLWQLKTYDRLSLHLPRQFCELPLMPFPADYPIYP SKQQFVAYLESYAASFGICPTYNRTVVCAEYDEQLLLWRVRTQTSDTTGEEVEYVSRWLI VATGENAEAVQPDIGGLQEFPGTIMHTSAYKSGSAFTGKRVLVVGCGNSGMEVCLDLCNH SAEPHIVVRDAVHILPREMLGHSTFGLSMWLLKWLPVHVVDRVLLCIARAMLGDTARLGL KRPASGPLQLKSLSGKTPVLDVGTFAKIKSGDIKVRPAVRQVSGRAVEFADGELEEFDAI VLATGYKSNVPFWLKDRVLFSEKDGLPRKAFPNGWKGEKGLYSVGFTRRGLMGTSVDARR VAHDVEQQWRKAKGTHRDGVPLPLVAVVYHGDGL

Transcript Sequence

Transcript ID	Zm00001d011764_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:161071221:161074991:1 gene:Zm00001d011764 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:yucca8 description:Indole-3-pyruvate monooxygenase YUCCA2
Sequence	GTAACATAGTAGCTTACATAACTCTTTGAGAATCATTCATATTTAACTGCACGAGATCAT TGGTGGAGAATTAGATATGGCAGAATAAATCATGGCACACAAGGTCTTTGGTTGCAGTAC GTTGCTTTTGCTAATATATTAACTTCTATCCATTTTACGCATCTTTGCTATAGCAGGCCT AGCTTTTACAGTTTAAGCATTTACTATGTACTTCAATCTTGCCATGAAAATAAAAAGTAT ATTCTCATCCTTGTTGAGGGCTATTACACCTCATGTACAGTTCTGTGATTAAACTATATC ACTAGGGTCTCATGTCCTATGCATGTTCTCTTTTGTGAGACCTTGCCACATGTCTGCCTG AGTCACTTAGTGATCCTCCATGACTCACCTTTCTATATTATTTTGGGATGGGCGTACTTG ATCTGAATCAAAATGAGACTCTTAGAGTATATAGGGGCATAGAGCACACAACTAGCTTAG CTAGGCCATGCCTTCAAAAACTGTGCATGAAACTCTAGAAGACAGACATCTTCAAAACTT CCTCCTCTCTACTCGTATTTCCCTACTGTCTTCTAACTCGTCAAACAACAAAGAGTCACA CCAGATTGCCCAGGCACCGACCTCTTGAAAAGAACCAGGGTTCTTATAAATCATTCGCAT CAGTCCTCACAGTGTCTTCTGGAGATGCACACAACATATCTCCCCCATCCTTCTCTCTCA CCCATGCCTTCATAAACAGCAAAGTTGGCTAGCTGGTTATTTGTATCAAGATGAAGTTTG AAGCCAACACATCCATTTCTCGCTAGTAAGATCAAGAAAAATCCATTGAAGCCTACTTCC TACCTAAATCTTCATGGATCCTTGGAGTGAAAGTGAGGGCAAGAGAGCCCATGATCCTAT CTTCAAATGTTTCAGCCAAAACCAAGGTCACCATCACTTCATGGAAAGGAGCACAGATGC TGCTGTTGCTCTCTCTGAGAGATGTAGATGCATCTGGGTTTCAGGTCCAATTATCGTGGG TGCAGGACCATCAGGGCTCGCTGCTGCTGCATGTCTCAAGGAGAAGGGAATCAGTAGCCT TATTCTTGAGCGCTCCAGATGCCTAGCTTCCCTCTGGCAGCTCAAGACATATGATCGTCT CAGCCTTCATCTTCCTCGGCAATTCTGTGAGCTTCCTCTCATGCCTTTCCCTGCCGACTA TCCGATATATCCCTCAAAGCAGCAGTTTGTAGCCTACCTGGAGAGCTATGCTGCAAGTTT TGGCATATGTCCCACATACAATCGCACAGTGGTGTGCGCAGAGTATGATGAACAGCTTCT GTTATGGCGTGTGAGGACGCAGACTTCTGACACAACGGGAGAGGAGGTGGAGTATGTATC CCGGTGGCTTATTGTGGCAACTGGTGAGAATGCTGAGGCCGTGCAGCCGGATATCGGTGG TCTACAAGAGTTCCCGGGAACAATCATGCACACCAGTGCATATAAAAGTGGCAGTGCATT CACTGGGAAGCGTGTTCTCGTTGTCGGGTGTGGAAACTCCGGGATGGAGGTGTGCCTAGA CCTCTGCAACCACAGTGCCGAGCCCCATATTGTTGTAAGAGATGCTGTACACATCTTGCC CAGGGAGATGCTTGGCCACTCCACCTTTGGTCTGTCAATGTGGCTCCTCAAGTGGCTCCC GGTCCACGTTGTGGACCGTGTTCTTCTGTGCATAGCGCGGGCCATGCTCGGGGATACTGC TCGGCTTGGGCTAAAGCGGCCGGCCTCTGGTCCTCTTCAGCTCAAGTCACTGTCTGGAAA GACCCCAGTTCTTGACGTCGGCACATTTGCAAAGATCAAGTCTGGAGATATCAAGGTACG ACCTGCCGTAAGACAGGTATCAGGAAGAGCGGTAGAATTTGCGGACGGTGAGTTGGAGGA GTTCGACGCCATTGTGCTTGCGACTGGCTACAAGAGCAATGTCCCCTTCTGGTTGAAGGA CCGAGTGTTATTTTCTGAAAAAGATGGATTGCCAAGAAAAGCATTTCCGAACGGGTGGAA GGGTGAGAAGGGCCTGTACTCGGTTGGGTTCACCCGGCGTGGACTGATGGGCACCTCGGT CGATGCCAGGAGGGTTGCCCACGACGTCGAGCAGCAATGGCGGAAGGCCAAAGGGACGCA TCGGGACGGCGTTCCTCTACCTCTGGTCGCTGTTGTTTACCATGGTGATGGGTTGTGATT GTGAGTTGCCAAAGGGTGTATGTACGTACGCATGCATTCTGCTGCTTGCTTGTGTAGTGC TTTGTATAGGGTATTGTACTGTCAATTTCTTTTTCTTTTTTTCTTTTGGCGTGCGTTCGT TTTGATGACTAACCATCCTACGTACTATAGGGGAGGGGGTGAATACTGAGGTGGCCGTGT TCTTCCAAAGTCGGGGCTCAGTTGACTTGGCCTCTAGCTACTGATAATGAAAGAAGCTTG CCTGGTTTTGTTCT