Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011742_T049
CDS Infomation

cds chromosome:B73_RefGen_v4:8:160447045:160457817:-1 gene:Zm00001d011742 gene_biotype:protein_coding transcript_biotype:protein_coding description:SUPPRESSOR OF ABI3-5
Sequence

ATGCTTCGGTACGAATTTGCTAAGCACGCACCATTAAAGGACATCCGCCTTGTTCGGGAT
AAGTTTACTCATGTGTCTAGAGGTTTTGCCTTCGTTCATTTCCATTCGGTGGAAGATGCT
ACGAAAGCTCTGGAAGCTACAAATGGGATTACACTCGAGAAAAACGGTCAGGTTTTGCGT
GTAGCATATGCTAAAAGTACACATGGACCTGCATCAGGGGGCTCACAGTCAAACAGCCTT
GCTGCAGCTGCCATTGAGGCTGCATCATTTGCTCAACAGTATGATGCCATAGGTTGGGCT
CCAAAAGAGTACAATCCTGATGACAAACAGAACAGTAACTTTGAATCTCAAAAAGACGAT
GGCAGTGGCACAGCACAGTCGGGATTTGTTTGGGATGAAAAATCTGGTTACTACTATGAT
TCTGCATCTGGATTCTATTATGACGGAACAACTGGCCTTTACTATGACAGCAACTCTGGA
GTTTGGTATTCGTACGATCAACAGACTCAACAGTATGTCCCTTGTACTGACCAGAGCAAT
ACTAAGGCAGCCGGGGAGACGTCCAGTGAAAACATGATCTCAGATAGTATTTGTGGGAAA
AAGGTTGTGATCTCTGCGCCTGCTGCCACAATTAAACAAAACAAGAAAACATCACTCCCT
GATGCTGTTCAAGCTGCTGCAAATGCAGCCCTGGCTGCAGAAAAGAGAGAAAAGGAGAAG
GCAAAAGAGATTAAGTTGGCCTCAAAAAGTAGTCTCATAGCTAATAAGAAGAAGATGAAC
AATGTCCTAGCCATGTGGAAGCAAAGGAATCAAGAAGGGCAGGCCGCACGGATTGTCATT
GATGACAAAGAACCACCAAATTCTGATGATAGATTTAATCATTCACATAGTGGAACTGGT
TTCTCTTCGAAAAGCAAGCCAAATTTTGAATTTGAAAATGCTATGGATAATTCTGTTCGC
CAAGGAATTGCATCGACCCAAATGTTGGATTCTGATGTAAAGCCTAGACCTGTCAGTAAC
AGCTTAGGTACTACAGTTATGGGTGTCATAAGAGGTTCTACTAGAGGAGTGATCAAGTCG
GATACTACGTTTCATGCATTATCTGATGCCGGGAGCACTGATTCCCGCACCACTATAATC
ACAAGATCAAATGGGTTAATGACAAGTCCTGTGGAACTTGTAACTCCTGCACCCTACAAA
ACTGATGTGTCTGCCTTAGTCTCTAATACTTCATCGGGAGTTTCTGGGAGTGGTAAACGT
CGGTTTTCTGAGGCACCAGGGCAATCCCAGTACAGGGATCGAGCTGCAGAAAGACGGAAT
CTGTATGGATCATCTCTTCGCACTGATGCTGTTGGATTGGATTCAAGTAAGAATACACTT
TCTTAA

Peptide Sequence

PEP ID

Zm00001d011742_P049
PEP Infomation

pep chromosome:B73_RefGen_v4:8:160447045:160457817:-1 gene:Zm00001d011742 transcript:Zm00001d011742_T049 gene_biotype:protein_coding transcript_biotype:protein_coding description:SUPPRESSOR OF ABI3-5
Sequence

MLRYEFAKHAPLKDIRLVRDKFTHVSRGFAFVHFHSVEDATKALEATNGITLEKNGQVLR
VAYAKSTHGPASGGSQSNSLAAAAIEAASFAQQYDAIGWAPKEYNPDDKQNSNFESQKDD
GSGTAQSGFVWDEKSGYYYDSASGFYYDGTTGLYYDSNSGVWYSYDQQTQQYVPCTDQSN
TKAAGETSSENMISDSICGKKVVISAPAATIKQNKKTSLPDAVQAAANAALAAEKREKEK
AKEIKLASKSSLIANKKKMNNVLAMWKQRNQEGQAARIVIDDKEPPNSDDRFNHSHSGTG
FSSKSKPNFEFENAMDNSVRQGIASTQMLDSDVKPRPVSNSLGTTVMGVIRGSTRGVIKS
DTTFHALSDAGSTDSRTTIITRSNGLMTSPVELVTPAPYKTDVSALVSNTSSGVSGSGKR
RFSEAPGQSQYRDRAAERRNLYGSSLRTDAVGLDSSKNTLS

Transcript Sequence

Transcript ID

Zm00001d011742_T049
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:160447045:160457817:-1 gene:Zm00001d011742 gene_biotype:protein_coding transcript_biotype:protein_coding description:SUPPRESSOR OF ABI3-5
Sequence

AAGCAGAGAAAGTGCGGAGTTTCATGGTGAGTTTGAAGACCGGTACCACAGTTCTAACCA
AAGCAGAGATGACAGCTATGAGAGAGATCATGAATATGGTCATTATGATTATGATTCGGA
CCATGAGAGAGGCAGGAGAGATAGTAGCTGGAAAAGACGCGATTCATGCGAGAGCAAACG
TGAAAGAAGTGGATTAAGTCGTGAAAGAGAGGAAAGTCCATACATGCGCCATAGCCGTTC
TCGATCACATGGACGTGATGACCGATCAAGATCATGGTCTAGATCAAGATCTCCTCGTGC
GAGAAGTCATGGTCGGAACCAAAGAGATGGCCTGTATGATGATAATCGATTTGACAGAAG
AAGGGAATATGATTGGGATGATAGGAGGCATGGTGATTCAGTGGCCCCATCTGCCACTGT
TGTTGTCAAGGGACTGTCTATGAAGACTAATGATGATGACCTATATCAGATTCTTGTACA
AGTTCTTCATAACTTCTTGCACCGGTTTTAAGTGTATTGTCTATTGTCTCGTTCGTTTTA
ATCATTTCGCCTGTTCTCTTGTAGTCTCAGTGGGGCCCTCTACGCAGTGTACGTGTGATC
AAGGAACGGAATTCTGGCATGTCTCGTGGATTTGCTTTTATTGACTTCTCCACTGTGGAA
GCTGCCTGTAGAATGATGGAAGCTACTGGAAAGAGTGGTCTCCAAATTGATGGCAGGAAT
GTGTTCTTTCAGTACAGTAGTAAACCAACCGGTGTAATGGGTGGGTCTTCTCCTGGACAA
GAAAATCTTACAAGGCCTACTTATGGGCCCCGCACTGTTGCTGCACTCTGTGACTGGATT
TGTTCTATATGCGGATGTATGAATTTCGCCCGCAGGACCTCCTGTTTTCAGTGCAATGAA
CCTCGTGCTGAGGATGCTCTACCAGCTGATGCGACAGGTTCCTCTCCACACTTTGGGAGA
AAGGGATCTGAACTAGGTTTTAGTTGTTCGTGGCTTAGATGAAAATGCTGATGAGGAAAT
GCTTCGGTACGAATTTGCTAAGCACGCACCATTAAAGGACATCCGCCTTGTTCGGGATAA
GTTTACTCATGTGTCTAGAGGTTTTGCCTTCGTTCATTTCCATTCGGTGGAAGATGCTAC
GAAAGCTCTGGAAGCTACAAATGGGATTACACTCGAGAAAAACGGTCAGGTTTTGCGTGT
AGCATATGCTAAAAGTACACATGGACCTGCATCAGGGGGCTCACAGTCAAACAGCCTTGC
TGCAGCTGCCATTGAGGCTGCATCATTTGCTCAACAGTATGATGCCATAGGTTGGGCTCC
AAAAGAGTACAATCCTGATGACAAACAGAACAGTAACTTTGAATCTCAAAAAGACGATGG
CAGTGGCACAGCACAGTCGGGATTTGTTTGGGATGAAAAATCTGGTTACTACTATGATTC
TGCATCTGGATTCTATTATGACGGAACAACTGGCCTTTACTATGACAGCAACTCTGGAGT
TTGGTATTCGTACGATCAACAGACTCAACAGTATGTCCCTTGTACTGACCAGAGCAATAC
TAAGGCAGCCGGGGAGACGTCCAGTGAAAACATGATCTCAGATAGTATTTGTGGGAAAAA
GGTTGTGATCTCTGCGCCTGCTGCCACAATTAAACAAAACAAGAAAACATCACTCCCTGA
TGCTGTTCAAGCTGCTGCAAATGCAGCCCTGGCTGCAGAAAAGAGAGAAAAGGAGAAGGC
AAAAGAGATTAAGTTGGCCTCAAAAAGTAGTCTCATAGCTAATAAGAAGAAGATGAACAA
TGTCCTAGCCATGTGGAAGCAAAGGAATCAAGAAGGGCAGGCCGCACGGATTGTCATTGA
TGACAAAGAACCACCAAATTCTGATGATAGATTTAATCATTCACATAGTGGAACTGGTTT
CTCTTCGAAAAGCAAGCCAAATTTTGAATTTGAAAATGCTATGGATAATTCTGTTCGCCA
AGGAATTGCATCGACCCAAATGTTGGATTCTGATGTAAAGCCTAGACCTGTCAGTAACAG
CTTAGGTACTACAGTTATGGGTGTCATAAGAGGTTCTACTAGAGGAGTGATCAAGTCGGA
TACTACGTTTCATGCATTATCTGATGCCGGGAGCACTGATTCCCGCACCACTATAATCAC
AAGATCAAATGGGTTAATGACAAGTCCTGTGGAACTTGTAACTCCTGCACCCTACAAAAC
TGATGTGTCTGCCTTAGTCTCTAATACTTCATCGGGAGTTTCTGGGAGTGGTAAACGTCG
GTTTTCTGAGGCACCAGGGCAATCCCAGTACAGGGATCGAGCTGCAGAAAGACGGAATCT
GTATGGATCATCTCTTCGCACTGATGCTGTTGGATTGGATTCAAGTAAGAATACACTTTC
TTAAGTTTTTCTTTATCGCGTACAATTGTTGTCATTTTCCCATTGTCATTCCTTCAGCAC
GATGTGTTAGTAACAGCAACATACTGTCCGTTCAGATTTTTTTTGTTATTCTCATCATTA
TCATTTTGCTGAAGCATCATTGTCAGTATTAGTGTTGGTATAAGGCTGACTTGGTATTTC
TGGGAGTCTTTTTGTTACCATAGGAATATGTCCTTGACCAACATACAGTTCAGGAATCTT
ATTTTTTGTTTTGTTTGTAAGCTTTTTATTGATTTTCTGGAAATTACCTGTTGTCAAGCT
GGTCACTATCCGTCCCGAAAGGGTCCAAGTGAGATAGGGTCGATGCCATTTCCTCCTGGC
GTGGGTGAACGTTCTAATGGTGAAATTGGCAACAACGAAAACTATGAAGTTATTACCGCT
GATAGCGCAATCGACGAAAGCAATGTGGGTAACCGTATTCTACGCAACATGGGTTGGCAA
GAGGGACTGGTAAGTTCATGTCCCACATATTTCTCAGTTTGAGATGCTCTCAGGCTTGAT
AGCATTTTCCATGAGTGTTTATGCCTCTTCTTTATTTCTCTTGCTAATGCAATTGCATCT
GACTTTGCAATCTAATTTATGTAAGTTTTTTATGAGAAAAAGGTAAATATGCCTATTTGT
AATAAGGCAGTTGTATCAAATTTATTTTAATGCAGCTCTCTGGTTTTAACCGGAGTACTT
TGGAGCTTGGTACGCTATTAGTATGTTAGCAAATCTTAAGCTTGTCTTGTTGATCTCTTT
ACAGAAATAATTAATGAAGTATACCTCTGTGTCTTGACTTGATTCTGAGTCCATGTGCTT
CCTTTGTGTCTAGACTCTACAATGTAGGAATCAGAAGTCACTGACATACTTAGTCTGAGT
GAGAAGATGCCTAGTTTTTAGCCTAAGTGAGAAGATGTCTAGTTTTTAGGTGCGTGCCTG
TAGGGAAACATCGCTTTGAGAACAAAGTGGTGGAAACTGAAAGGAAAGACGACAGAAGCC
TTCAAGGAAAGGGTCATCAAAGAGGGCACTCGGAAGAAGACAAACAATAATTGGGAGAAG
ATGGCAACCTGCATTCGGAAGGTGGCTTTAAAGGTGCGTGGAGCAAGTGAGCAACCAAAG
GGAGTGGAGGCGAAGCTAAAGTTTTTTGGTGGTGGAATGAGGAAGTCTAAAGGGACCTAT
TAAGGAGAAGAAAGCATGCTATAGACGTTTGTACCATGACAGGAGTGGACAACATAGAGA
AGTATAAGGTAGTAAAAAAGACTCGTGGCAAAGGGTAGGGCGTACGAGGATTTTTATCAA
ACGTGAAGGAAGGAGGGTGAAAGGAGAGGACATATATTGGGATTGTTAGGGTTCATGAGA
GGAAGACAAGGGACTTCAACCAAGTTGAGTGTATTAAGGACAAAACAGAGTACCTTTTCA
TGGAGTATGAGGTCATATGTAGATGGTGAGGGTATTTTAACAAAGTATTTAATGGGGACA
ATGGGGATGTAACCTTTACTACTCTTTCGATGACACCAATAAGCACTTTGTGCGTAGTAT
CCAAGAATCCAAGGGTAGAGAGGCATTGAAATGGATGAAGGGGGTAAGATGATGGACCCT
AATGATATCTGAGACATGGATATGCCTTGGGGACATAGCTATACTATAGTTAACCAAGTT
GTTTAACCATATCTTTTGGTCAAACAAGATGTCTGACAAGTGGAGAAATATTTAAGGGAG
ATATTCAAAGTTGTATTAGGTATCGGGAATTAAGTTTATGAGCCATACTACGAAGCTATG
AGAGAGTTATCGAGCATCATCTCAAGGGAATAACAACAATCTCTGTGAAACCAATTTGGT
TTCGTGTCTAAAAAGTCAACCATGGAAGCCATTTTCTCAATAAGACAAGTTATGGAGTGA
TGTAGGGAGCACAACCTACCCATGGTTTTAATTTACTTGGAGAAGGCCTACGATAAAATA
CCAAGGAATGTTATGTGGTGGGTTTGGTCAGACATAATGTTTTAGGGTGTGCTTGGTTCT
GCTTTTAACACCTGTTTCTGCTTAAAAAAGTAGAAAGTTGGACCATAGGTCTCCCACCCA
GCCCTTGCTTTTCCCACCGCAGTTGCTTTTCCGTAGTTGAACTCATGAAGGAGACAGATT
CTTGCTTTTCCAACGGTGGCAACAAAGTCAAGTTCGAAGAATTTACCCACCTGACATCGG
TTAAGGGGCACTAGACTGTTATTTCTCTTTCTTTCACCTTTTCTCTTTCATCGTTTTCTT
CACACTGTTCAATCCAAAAGCTTAAGCTATTATAGAAGAAGGTAGTCAATTCACTTATAC
ATTTCAACATCTTCACGCACGTGCAGCCAGAGAGGCGCATACGTGGAAATAAAGGGGCGG
AGGCACAAACTTCTGTAGGTTTTGAACTTGAAACCTCTGATTCCGATACTATGTTAGAGT
GGATGCAGTAACCAGTTCAACTCAAAAGTTTAATCTATTAGGAGAAGGTAGTCAATCAAC
TTATACACTTTAATTTTTCAACACACATCGAGTAGGGACCAAACAAAACCCAGAGAAAAG
CTAGGGTTCGGCCGCATGCCCTCCCACCATCCCAGTACCATATCACTGTCCTCTACAGTA
GCCTTGGCGGCTTCCGTATGCGCGACCCCCTCTCCAGGAAGACGCTGTTTAGTTATTTAG
TTGTTTTTAAGTTATTTTGTAGTTATTTATATGTATGAAATGTTATAATAGGGGTTGAAG
TAGACATCTGAATTATTAGGATAAATTTAATATTTTGAAATAGATACGTATAGGATTTGG
CGCTAATATTTAGTTATGTTGTTAAACACATTATAAAAACAAGAAAAAATGTCGCATATT
TTTTGTGCATTATTTGCTTCCCACAACGAAAAACATGAAAAAACATTTGAATCCATATTC
AAATTTTATATATATATCATTTGAGAAGATATATGACAAAATTTGACGTTTTCTTTTTAT
GAATCTTAACAAGTTCAATGCTAAAAACAAGAATACGGATTTACACAACAGATTAGCAGA
TTCTTTATTCACAATCGAAGCAAAAACAAAAAATTAACATATGAACCAATATCCGCTTGC
ATCTCTAACTATAATGGTGAAAATTATGTCAATCATCACGAATAATGTTGCATGTTGCAC
CACGGTCAATTTGCATATAAACAGTCTTGCAATAGATCATATGAAGTCTACATTCTCACA
TCAGTTTGAACCAAACGACTTTTAGCTTTTTCACAACAAACAACTCTCAGCAGACATCAT
AAGCAATTTTTCTCAAAGCAGACAACTGAACCCAGCGCACCTTTAATGAAGTATGTTGGA
CTCATTAAGGACATATACAACAATGTTGTGATGATGGAGACACGGATGACTTTTCGGTTA
GAATAGGACTACATCAAGGATCAACTTTGAGCCCTTGTTGCATTAGTGATGTGTTACAAG
GGGCATATAAGGGGAGATGCCTTAGTGTATGTTTTTTTATGTAGTGCTAGATGACAAAAG
CCGG