Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011721_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:159899428:159902796:-1 gene:Zm00001d011721 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid insensitive1a description: brassinosteroid insensitive1a
Sequence	ATGGAATCTCCGGGGCTGGTGCTGGTCGCTGTAGTGGCACTCTTCGTCGTCGTCGTGGCG GCCACCGCCTCCGACGGCGACGATGCCCAGCTGCTGGAGCAGTTCAAGGAGGCCGTGCCT AGCCAGGCCCCGGACCTGCGCGGGTGGAGCGCCAGCGATGGCGCCTGCAGGTTCCCAGGC GCCGGCTGCAGGGGCGGTCGCCTCACGTCGCTGTCGCTCGCCGCCGTCCCGCTCAATGCC GACTTCCGGGCCGTCGCGGCCACCCTGCTGCAGCTGAGCAGCCTCGAGACGCTCAGCCTG CGCGGCACCAACGTCAGCGGCGCGCTGGCCGCCGCGCCGAGGTGCGGGGCCAAGCTGCAG TCGCTCGACCTGTCAGGGAATGCCGGCCTGCGGGGCACCGTCGCCGACGTCGAGGCGCTG GCCGCTTCCTGCACCGGCCTTAGCGCTCTGAACCTCTCCGGCGGTTCGGTCGGTGGGCCG AGGTCTGCCGGCGCTGTCGCTTCTTCCGGATTTGGCCGGCTAGACGCTCTCGACTTGTCC GACAACAAGATCTCCGGCGATGGCGACCTCCGGTGGATGGTGGGCGCCGGCGTCGGCGCG GTCCGCCGTCTGGACCTCTCCGGGAACAAGATCTCTCGGCTCCCAGAGCTCACCAACTGC TCTGGGCTTGAGTACCTCGACCTCTCCGGCAACCTCATCGCGGGCGAGGTAGCCGGCGGG ATTCTCGCTGACTGCCGTGGCCTGAGAACGCTCAACCTCTCAGGCAACCACCTGGTCGGC CCGTTCCCGCCGGACGTCGCCGCCCTCACCGCTCTCACCGCGCTAAACCTGTCAAACAAC AACTTCTCCAGCGAGCTCCCCGCCGACGCTTACAACGAACTACGGCAGCTCAAGGTGCTG TCCCTCTCCTTCAACCACTTCAACGGCACCATTCCGGACTCCTTGGCAGCGCTGCCGGAG CTCGACGTGCTGGACCTCAGCTCCAACACCTTCTCCGGCACCATCCCTTCGTCCATCTGC CAAGGCCCCAACTCCAGCCTCCGCATGCTGTACCTCCAGAACAACTACCTCTCCGGCGCC ATCCCGGAGTCAATCTCCAACTGCACCAAGCTCGAATCTCTCGACCTCAGCCTCAACAAC ATCAACGGCACCCTTCCCGCATCCCTCGGAAAACTCCGGGAGCTCCGGGACCTCATTCTG TGGCAGAACTTGTTGGAGGGCGAGATTCCGGCGTCCCTGGAAAATTTGGTCAGGCTCGAG CATCTCATCCTCGACTACAACGGGCTCACCGGTGGCATCCCGCGGGAACTCTCCAAGTGC AAGGAGCTGAACTGGATATCCTTGGCGAGCAACCAGCTGTCTGGTCCGATCCCGGCTTGG CTTGGGCAGCTCAGCAACTTGGCCATCTTGAAGCTGAGCAACAATTCCTTCTCGGGGCCA ATACCGGCTGAGCTTGGCAACTGCCAGAGCTTGGTCTGGCTGGACTTGAACAGTAACCAG CTTAAAGGGTCAATACCGGCGGAACTGGCAAAACAGTCTGGGAAGATGAACGTCGGCCTT GTCCTTGGGCGGCCATATGTGTATCTTCGAAATGACGAGCTGAGCAGCGAGTGCCATGGC AAGGGGAGCTTGCTAGAGTTCACCAGCATTCGGCCTGAAGAGCTCAGCCGGATGCCAAGC AAGAAGCTGTGCAACTTCACTCGGGTGTACATGGGGAGCACAGAGTATACCTTCAATAAG AATGGATCCATGATATTTCTGGATTTGTCATTTAATCAACTCGACTCGGAGATCCCAAAG GAGCTTGGGAACATGTACTACCTCATGATCATGAATCTTGGGCACAACTTACTGTCTGGC GTCATCCCACCAGAACTAGCTGGTGCCAAGAAGCTTGCGGTACTTGACCTGTCACACAAC CAGTTACAAGGGCCTATTCCCAACTCCTTCTCAACGTTGTCCTTGTCGGAGATCAACCTT TCAAATAATCAGCTGAATGGTTCAATTCCAGAGCTGGGTTCGCTGTTCACATTCCCGAGG ATTTCATATGAGAATAACTCTGGTCTTTGTGGCTTCCCACTGTTGCCATGTGGGCACAAT GCTGGCTCAAGTTCTTCAGGTGACCATCGATCCCACCGGACCCAGGCTTCGCTCGCAGGT AGTGTTGCTATGGGACTCTTGTTCTCGCTGTTCTGTATAGTTGGTATTGTCATCATAGCC ATTGAGTGCAAGAAGCGGAAGCAGATCAATGAAGAGGCAAGTACCTCCCGTGACATATAC ATTGATAGCCGGTCACATTCTGGGACAATGAATTCCAATTGGAGACTCTCTGGTACTAAT GCTCTCAGCGTCAACCTCGCTGCATTTGAGAAGCGACTGCAGAAGCTAACTTTTAATGAT CTTATTGTGGCAACGAATGGCTTCCACAATGATAGCCAAATCGGGTCTGGTGGTTTTGGG GATGTCTATAAGGCCCAGCTCAAGGATGGAAAGGTTGTTGCAATCAAGAAGCTTATACAT GTGAGTGGCCAAGGTGACCGGGAGTTTACAGCAGAAATGGAGACCATCGGGAGGATCAAA CACCGCAATCTTGTTCCGCTCCTTGGCTACTGCAAGTGTGGCGAGGAGCGGCTGTTGGTT TATGATTACATGAGGTTTGGCAGCTTGGAAGACGTGTTGCATGACCGAAAAAAGATCGGG ATCAAGCTAAATTGGGCAGCAAGGAAAAAGATCGCCATTGGGGCTGCAAGGGGATTGGCA TACCTCCACCACAACTGTATACCGCACATCATACACCGAGACATGAAGTCAAGCAATGTG CTTATCGATGAGCAGTTAGAGGCAAGGGTATCCGATTTCGGTATGGCAAGGATGATGAGC GTGGTGGATACCCACCTGAGCGTGTCCACTCTCGCCGGCACTCCAGGCTACGTGCCGCCA GAGTACTACCAGAGCTTCAGATGCACTACCAAGGGCGATGTGTATAGCTATGGCGTTGTA TTGCTCGAGCTGCTCACTGGGAAACCGCCTACAGATTCAACCGACTTCGGCGAGGACAAC AATCTCGTAGGATGGGTCAAACAACACTCAAAGTCGAAGCTGGCAGATCTGTTTGACCCT GTACTACTGGTGGAGGATCCGGCCTTGGAGCTCGAGCTACTAGAGCACCTGAAAATCGCC TGTGCGTGCTTGGATGACCGACCATCCAAGCGCCCGACGATGCTTAAAGTCATGGCGATG TTCAAGGAGATGCAGGCCAGTTCGGCTGTGGACTCGAAGACCTCAGCATGCACGGTCGCC GTGGATGATGCGTGTTTTGGCGACGTGGAGATGACGACCCTGAAAGAAGACAAGGAGGAG AAGGACTAG

Peptide Sequence

PEP ID	Zm00001d011721_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:159899428:159902796:-1 gene:Zm00001d011721 transcript:Zm00001d011721_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid insensitive1a description: brassinosteroid insensitive1a
Sequence	MESPGLVLVAVVALFVVVVAATASDGDDAQLLEQFKEAVPSQAPDLRGWSASDGACRFPG AGCRGGRLTSLSLAAVPLNADFRAVAATLLQLSSLETLSLRGTNVSGALAAAPRCGAKLQ SLDLSGNAGLRGTVADVEALAASCTGLSALNLSGGSVGGPRSAGAVASSGFGRLDALDLS DNKISGDGDLRWMVGAGVGAVRRLDLSGNKISRLPELTNCSGLEYLDLSGNLIAGEVAGG ILADCRGLRTLNLSGNHLVGPFPPDVAALTALTALNLSNNNFSSELPADAYNELRQLKVL SLSFNHFNGTIPDSLAALPELDVLDLSSNTFSGTIPSSICQGPNSSLRMLYLQNNYLSGA IPESISNCTKLESLDLSLNNINGTLPASLGKLRELRDLILWQNLLEGEIPASLENLVRLE HLILDYNGLTGGIPRELSKCKELNWISLASNQLSGPIPAWLGQLSNLAILKLSNNSFSGP IPAELGNCQSLVWLDLNSNQLKGSIPAELAKQSGKMNVGLVLGRPYVYLRNDELSSECHG KGSLLEFTSIRPEELSRMPSKKLCNFTRVYMGSTEYTFNKNGSMIFLDLSFNQLDSEIPK ELGNMYYLMIMNLGHNLLSGVIPPELAGAKKLAVLDLSHNQLQGPIPNSFSTLSLSEINL SNNQLNGSIPELGSLFTFPRISYENNSGLCGFPLLPCGHNAGSSSSGDHRSHRTQASLAG SVAMGLLFSLFCIVGIVIIAIECKKRKQINEEASTSRDIYIDSRSHSGTMNSNWRLSGTN ALSVNLAAFEKRLQKLTFNDLIVATNGFHNDSQIGSGGFGDVYKAQLKDGKVVAIKKLIH VSGQGDREFTAEMETIGRIKHRNLVPLLGYCKCGEERLLVYDYMRFGSLEDVLHDRKKIG IKLNWAARKKIAIGAARGLAYLHHNCIPHIIHRDMKSSNVLIDEQLEARVSDFGMARMMS VVDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGKPPTDSTDFGEDN NLVGWVKQHSKSKLADLFDPVLLVEDPALELELLEHLKIACACLDDRPSKRPTMLKVMAM FKEMQASSAVDSKTSACTVAVDDACFGDVEMTTLKEDKEEKD

Transcript Sequence

Transcript ID	Zm00001d011721_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:159899428:159902796:-1 gene:Zm00001d011721 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid insensitive1a description: brassinosteroid insensitive1a
Sequence	ATGGAATCTCCGGGGCTGGTGCTGGTCGCTGTAGTGGCACTCTTCGTCGTCGTCGTGGCG GCCACCGCCTCCGACGGCGACGATGCCCAGCTGCTGGAGCAGTTCAAGGAGGCCGTGCCT AGCCAGGCCCCGGACCTGCGCGGGTGGAGCGCCAGCGATGGCGCCTGCAGGTTCCCAGGC GCCGGCTGCAGGGGCGGTCGCCTCACGTCGCTGTCGCTCGCCGCCGTCCCGCTCAATGCC GACTTCCGGGCCGTCGCGGCCACCCTGCTGCAGCTGAGCAGCCTCGAGACGCTCAGCCTG CGCGGCACCAACGTCAGCGGCGCGCTGGCCGCCGCGCCGAGGTGCGGGGCCAAGCTGCAG TCGCTCGACCTGTCAGGGAATGCCGGCCTGCGGGGCACCGTCGCCGACGTCGAGGCGCTG GCCGCTTCCTGCACCGGCCTTAGCGCTCTGAACCTCTCCGGCGGTTCGGTCGGTGGGCCG AGGTCTGCCGGCGCTGTCGCTTCTTCCGGATTTGGCCGGCTAGACGCTCTCGACTTGTCC GACAACAAGATCTCCGGCGATGGCGACCTCCGGTGGATGGTGGGCGCCGGCGTCGGCGCG GTCCGCCGTCTGGACCTCTCCGGGAACAAGATCTCTCGGCTCCCAGAGCTCACCAACTGC TCTGGGCTTGAGTACCTCGACCTCTCCGGCAACCTCATCGCGGGCGAGGTAGCCGGCGGG ATTCTCGCTGACTGCCGTGGCCTGAGAACGCTCAACCTCTCAGGCAACCACCTGGTCGGC CCGTTCCCGCCGGACGTCGCCGCCCTCACCGCTCTCACCGCGCTAAACCTGTCAAACAAC AACTTCTCCAGCGAGCTCCCCGCCGACGCTTACAACGAACTACGGCAGCTCAAGGTGCTG TCCCTCTCCTTCAACCACTTCAACGGCACCATTCCGGACTCCTTGGCAGCGCTGCCGGAG CTCGACGTGCTGGACCTCAGCTCCAACACCTTCTCCGGCACCATCCCTTCGTCCATCTGC CAAGGCCCCAACTCCAGCCTCCGCATGCTGTACCTCCAGAACAACTACCTCTCCGGCGCC ATCCCGGAGTCAATCTCCAACTGCACCAAGCTCGAATCTCTCGACCTCAGCCTCAACAAC ATCAACGGCACCCTTCCCGCATCCCTCGGAAAACTCCGGGAGCTCCGGGACCTCATTCTG TGGCAGAACTTGTTGGAGGGCGAGATTCCGGCGTCCCTGGAAAATTTGGTCAGGCTCGAG CATCTCATCCTCGACTACAACGGGCTCACCGGTGGCATCCCGCGGGAACTCTCCAAGTGC AAGGAGCTGAACTGGATATCCTTGGCGAGCAACCAGCTGTCTGGTCCGATCCCGGCTTGG CTTGGGCAGCTCAGCAACTTGGCCATCTTGAAGCTGAGCAACAATTCCTTCTCGGGGCCA ATACCGGCTGAGCTTGGCAACTGCCAGAGCTTGGTCTGGCTGGACTTGAACAGTAACCAG CTTAAAGGGTCAATACCGGCGGAACTGGCAAAACAGTCTGGGAAGATGAACGTCGGCCTT GTCCTTGGGCGGCCATATGTGTATCTTCGAAATGACGAGCTGAGCAGCGAGTGCCATGGC AAGGGGAGCTTGCTAGAGTTCACCAGCATTCGGCCTGAAGAGCTCAGCCGGATGCCAAGC AAGAAGCTGTGCAACTTCACTCGGGTGTACATGGGGAGCACAGAGTATACCTTCAATAAG AATGGATCCATGATATTTCTGGATTTGTCATTTAATCAACTCGACTCGGAGATCCCAAAG GAGCTTGGGAACATGTACTACCTCATGATCATGAATCTTGGGCACAACTTACTGTCTGGC GTCATCCCACCAGAACTAGCTGGTGCCAAGAAGCTTGCGGTACTTGACCTGTCACACAAC CAGTTACAAGGGCCTATTCCCAACTCCTTCTCAACGTTGTCCTTGTCGGAGATCAACCTT TCAAATAATCAGCTGAATGGTTCAATTCCAGAGCTGGGTTCGCTGTTCACATTCCCGAGG ATTTCATATGAGAATAACTCTGGTCTTTGTGGCTTCCCACTGTTGCCATGTGGGCACAAT GCTGGCTCAAGTTCTTCAGGTGACCATCGATCCCACCGGACCCAGGCTTCGCTCGCAGGT AGTGTTGCTATGGGACTCTTGTTCTCGCTGTTCTGTATAGTTGGTATTGTCATCATAGCC ATTGAGTGCAAGAAGCGGAAGCAGATCAATGAAGAGGCAAGTACCTCCCGTGACATATAC ATTGATAGCCGGTCACATTCTGGGACAATGAATTCCAATTGGAGACTCTCTGGTACTAAT GCTCTCAGCGTCAACCTCGCTGCATTTGAGAAGCGACTGCAGAAGCTAACTTTTAATGAT CTTATTGTGGCAACGAATGGCTTCCACAATGATAGCCAAATCGGGTCTGGTGGTTTTGGG GATGTCTATAAGGCCCAGCTCAAGGATGGAAAGGTTGTTGCAATCAAGAAGCTTATACAT GTGAGTGGCCAAGGTGACCGGGAGTTTACAGCAGAAATGGAGACCATCGGGAGGATCAAA CACCGCAATCTTGTTCCGCTCCTTGGCTACTGCAAGTGTGGCGAGGAGCGGCTGTTGGTT TATGATTACATGAGGTTTGGCAGCTTGGAAGACGTGTTGCATGACCGAAAAAAGATCGGG ATCAAGCTAAATTGGGCAGCAAGGAAAAAGATCGCCATTGGGGCTGCAAGGGGATTGGCA TACCTCCACCACAACTGTATACCGCACATCATACACCGAGACATGAAGTCAAGCAATGTG CTTATCGATGAGCAGTTAGAGGCAAGGGTATCCGATTTCGGTATGGCAAGGATGATGAGC GTGGTGGATACCCACCTGAGCGTGTCCACTCTCGCCGGCACTCCAGGCTACGTGCCGCCA GAGTACTACCAGAGCTTCAGATGCACTACCAAGGGCGATGTGTATAGCTATGGCGTTGTA TTGCTCGAGCTGCTCACTGGGAAACCGCCTACAGATTCAACCGACTTCGGCGAGGACAAC AATCTCGTAGGATGGGTCAAACAACACTCAAAGTCGAAGCTGGCAGATCTGTTTGACCCT GTACTACTGGTGGAGGATCCGGCCTTGGAGCTCGAGCTACTAGAGCACCTGAAAATCGCC TGTGCGTGCTTGGATGACCGACCATCCAAGCGCCCGACGATGCTTAAAGTCATGGCGATG TTCAAGGAGATGCAGGCCAGTTCGGCTGTGGACTCGAAGACCTCAGCATGCACGGTCGCC GTGGATGATGCGTGTTTTGGCGACGTGGAGATGACGACCCTGAAAGAAGACAAGGAGGAG AAGGACTAG