Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011706_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:8:159306374:159314076:1 gene:Zm00001d011706 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable mitochondrial-processing peptidase subunit beta mitochondrial
Sequence

ATGGCCGCTCTCGCCTCAGCCGCCCGCTCGAGGCGCCGGCTCCTTCCCTATCTGTACCGC
CTCCTCCACTCCGCGTCCACAACCGCTGTCTCCCCGTCGCCCTCCACCAGCCGCTTCCTC
CGCCACGCCTCGCCGGTGCCCCGCACCCCTGACCACTCCCCTTACCTTCGGTTCCCCGCC
GCGCGCGTCTCTACGCTCCCCTCAGGCCTCCGCGTCGTCACGCAGGCCTACCCGGTCGCC
ACACGGATTGCCTCCGTCGGCGTCTGGGTCGATGCGGGGAGCCGCTTCGAGCTCCCTGGA
ACCAACGGAACCGCACACTTCCTGGAGCACATGGCCTTCAAGGGCACACGGCGCCGGCCC
AACGCGCAGGTGCTCGAGGTGGAGATCGAGGACATGGGCGCGCGCCTCAACGCGTATACC
TCCCGCGAGCAGACCACCTTTTTTGCCGACGTGCAGGCGCGCCACGTTCCGGCGGCACTC
GACGTCCTCAGCGACATCCTACAGCACCCGCGATTCCCCGAAAGGGCTATCCAGCGGGAG
CGCGGCGTCATCCTCCGTGAGATGGAGGAGGTGCAAGGTATGATGGAAGAGGTGATATTT
GATCACTTGCATGCAGCAGCATTCCAAGGCCATCCACTAGGGGACACAATATTAGGTCCT
GAAGAAAATATTAGGTCCATTTCTAAGAAAGATTTGGAGCAATATATCTCAACTCACTAT
ACCTGTCCTCGAATGGTTGTATCTGCTGCTGGAAGTGTCAGTCACGATGAGGTTGTTGAT
CAAGTGAAAGAATTATTCACAGAATTCTCCACTGATCCAACTACTGCTGATCAGCTTGTT
CAGGCGAACCCAGCTATTTTTACTGGATCTGAGGTTCGTGTAGAAAATGCAGAGTTTCCT
CTAGCACACATCGCAATAGCTTTCAAAGGTTCATCATGGACTGACCCTAGCTCCATTCCC
CTTATGGTGATCCAAAGCATATTGGGATCCTGGAACAGGAGCATTGGGGTTGGGAACTGC
TCAGGGTCTTCTTTAGCTCGTGGTATCAGCAATGCTAATTTAGCTGAGAGCCTGATGGCG
TTCAATACTAACTATCGGGACACAGGAATATTTGGCATTTATACTATTGCTCCGCCTGAC
ACCCTGCAAGACTTGTCACGGTTAATAATGGCGGAGTTTAGAAGACTTGCATCCCAGGTG
TCAGAAACAGAGGTTGCCCGTGCCCGCAATCAGCTGAAATCTTCTCTGTTACTTCACATT
GATGGATCCACTGCAGTTACTGAGAATAATGGTCGCCAGATGCTAACTTATGGGCGAGTC
ATGCCGTTCCTAGAGCTTTTTGCACGCATTGATGCTGTTGACTGTGCTACAGTAATGGAA
ACTGCCAAGGAGTACATAATTGATAAGGTAAATCTCCAAGAGTGGTGA

Peptide Sequence

PEP ID

Zm00001d011706_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:8:159306374:159314076:1 gene:Zm00001d011706 transcript:Zm00001d011706_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable mitochondrial-processing peptidase subunit beta mitochondrial
Sequence

MAALASAARSRRRLLPYLYRLLHSASTTAVSPSPSTSRFLRHASPVPRTPDHSPYLRFPA
ARVSTLPSGLRVVTQAYPVATRIASVGVWVDAGSRFELPGTNGTAHFLEHMAFKGTRRRP
NAQVLEVEIEDMGARLNAYTSREQTTFFADVQARHVPAALDVLSDILQHPRFPERAIQRE
RGVILREMEEVQGMMEEVIFDHLHAAAFQGHPLGDTILGPEENIRSISKKDLEQYISTHY
TCPRMVVSAAGSVSHDEVVDQVKELFTEFSTDPTTADQLVQANPAIFTGSEVRVENAEFP
LAHIAIAFKGSSWTDPSSIPLMVIQSILGSWNRSIGVGNCSGSSLARGISNANLAESLMA
FNTNYRDTGIFGIYTIAPPDTLQDLSRLIMAEFRRLASQVSETEVARARNQLKSSLLLHI
DGSTAVTENNGRQMLTYGRVMPFLELFARIDAVDCATVMETAKEYIIDKVNLQEW

Transcript Sequence

Transcript ID

Zm00001d011706_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:159306374:159314076:1 gene:Zm00001d011706 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable mitochondrial-processing peptidase subunit beta mitochondrial
Sequence

GCAAGAATAAACAGAAGAGTAGAGAAAAAACCAAACCAAAACCCGGAGCCCTCCTCGTCT
CCCCCGTTCGGCGGCGCGACGGTAGAGAGATTCCGTCGAACACATGGCCGCTCTCGCCTC
AGCCGCCCGCTCGAGGCGCCGGCTCCTTCCCTATCTGTACCGCCTCCTCCACTCCGCGTC
CACAACCGCTGTCTCCCCGTCGCCCTCCACCAGCCGCTTCCTCCGCCACGCCTCGCCGGT
GCCCCGCACCCCTGACCACTCCCCTTACCTTCGGTTCCCCGCCGCGCGCGTCTCTACGCT
CCCCTCAGGCCTCCGCGTCGTCACGCAGGCCTACCCGGTCGCCACACGGATTGCCTCCGT
CGGCGTCTGGGTCGATGCGGGGAGCCGCTTCGAGCTCCCTGGAACCAACGGAACCGCACA
CTTCCTGGAGCACATGGCCTTCAAGGGCACACGGCGCCGGCCCAACGCGCAGGTGCTCGA
GGTGGAGATCGAGGACATGGGCGCGCGCCTCAACGCGTATACCTCCCGCGAGCAGACCAC
CTTTTTTGCCGACGTGCAGGCGCGCCACGTTCCGGCGGCACTCGACGTCCTCAGCGACAT
CCTACAGCACCCGCGATTCCCCGAAAGGGCTATCCAGCGGGAGCGCGGCGTCATCCTCCG
TGAGATGGAGGAGGTGCAAGGTATGATGGAAGAGGTGATATTTGATCACTTGCATGCAGC
AGCATTCCAAGGCCATCCACTAGGGGACACAATATTAGGTCCTGAAGAAAATATTAGGTC
CATTTCTAAGAAAGATTTGGAGCAATATATCTCAACTCACTATACCTGTCCTCGAATGGT
TGTATCTGCTGCTGGAAGTGTCAGTCACGATGAGGTTGTTGATCAAGTGAAAGAATTATT
CACAGAATTCTCCACTGATCCAACTACTGCTGATCAGCTTGTTCAGGCGAACCCAGCTAT
TTTTACTGGATCTGAGGTTCGTGTAGAAAATGCAGAGTTTCCTCTAGCACACATCGCAAT
AGCTTTCAAAGGTTCATCATGGACTGACCCTAGCTCCATTCCCCTTATGGTGATCCAAAG
CATATTGGGATCCTGGAACAGGAGCATTGGGGTTGGGAACTGCTCAGGGTCTTCTTTAGC
TCGTGGTATCAGCAATGCTAATTTAGCTGAGAGCCTGATGGCGTTCAATACTAACTATCG
GGACACAGGAATATTTGGCATTTATACTATTGCTCCGCCTGACACCCTGCAAGACTTGTC
ACGGTTAATAATGGCGGAGTTTAGAAGACTTGCATCCCAGGTGTCAGAAACAGAGGTTGC
CCGTGCCCGCAATCAGCTGAAATCTTCTCTGTTACTTCACATTGATGGATCCACTGCAGT
TACTGAGAATAATGGTCGCCAGATGCTAACTTATGGGCGAGTCATGCCGTTCCTAGAGCT
TTTTGCACGCATTGATGCTGTTGACTGTGCTACAGTAATGGAAACTGCCAAGGAGTACAT
AATTGATAAGGTAAATCTCCAAGAGTGGTGACTATTCTACTAACGCAGAGTAATACAGTA
TCTTTGGTGAACAGGTCTGCAGTATAGTGGTCACAGGAGCCGCATCTTAAGCACTGGGTT
CGATTGCCTGTGAGAGTGATTTTAAACAGGCCTAGGCTAAAAAACACCCTCACCGGCAGT
CTCCCCGAGTCTAGGGCAGCTTGTCTTGGGGGGTGTTTCATGGCTCGCGTGGTAGAAGCT
TAATTCAAGTCTGTGGGGAAGGGTTTTTCCTCCCTCACGGTAGTTTGGAAACTCAAATCC
CCTCCCAGTGAATGAAAGGGGATTGAGTGAAAAGGGGATTGAGGGGGAAATTAGTTCATT
TCTCCCCCAATCCTATCCAATCTCGGAAGGGATTTGAATTTACAAACTAGCCCGCAGGAG
TTTTAATACAGTATATCTTTGAATACTTTTGTGCTACCGTAGGCCTCACGCACTTACACG
ATTGGTTTGGCAATTTACAGGATATTGCTCTGGCTGCAGTGGGACAGCTCACGGAATTAC
CAGAACTTAGTTGGTTTCGCTCCGAAACATGTTCTGACGATGATTTTACTCGAAGAATAT
TATTTGGGAATGCAAAGTAGTTGAAGCTGTGGCTCTGTTTTGGTATTGTTGTAACTCTAG
GTCAATCATTCTAAGAAACTATCAATTGATAGATAGCATCAGCTATTTCAGTTATTTGTT
AGTTTTGCGCTTGTACTGTGTACTTATTTGACGCAAAATGTGCAAATAATTTACTTTGCT
GTGGTGCTCT