Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011652_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:8:157562221:157567969:1 gene:Zm00001d011652 gene_biotype:protein_coding transcript_biotype:protein_coding description:SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Sequence	ATGCCTGATCATCATCTCCACAGCTACTTCCGCTACCTTGTTGATCATCCTCAACTGCTG AAGGATGGTGCTGATGCTGTTGGCACGAATAAAGGCAATACTGAGAATGAGCATGCTTCA TCTGGCGGGGCTTTATCATTGCTTGGGACCACATATGACTCAGGAGACGAGAATGAAGGC ACACTCCCGCGTAGTTCGGAAGGCATGAATCCTGAAAATAGCATGACTCTTGATGTGCAG GGCCATGTAAAATCTGCATCAATTATGCCTGACAAAAAAGAAATAGGCAAAAATCAGAAT GCTCCTCCTGCAGTTAAAAGAAAAACAATATTGATGAAGAAGAATCAGATTCTTACTGGC AACAGCATGGTTGCTGTTCAGCATGAAAAGGTTAATGACGCAATTATAGCATCAAGTACT TCCAAATCACATACCAATTCAGGCTTATCAGAAATAAAAGAAATGATCCTTGAACCACCA TCTTTCATGAAACGCACAATGGAGAAAATAATTGAGTTCATTCTGACAAATGGGAAGGAG TTCGAGAAAAAACTGATTGAGCAAGACAGAACAACTGGGAGGTTTCCATTTCTTCTGTCT TCTAATCCATACCACTCATATTATCTAAAGTTTCTCCAGGAAACTGAAGAGTCCAATTCA CATGGTAGAAGTCCTAATAACAAGGACAGAAGAGGTTCTTCTGACCGGAGGGGCAGAAAC TCTCGTGAGCGCGCCGACAGAAGCTCCTGTGAGCGCGCTGACAGAAGCTCTCGTGAACGC GCCGACAGAAGGTGCTCAATGGAGCGCAAAGACATCAATTATAGCATGGAATCCAGTGCT TCTGATAGAAGCTCATCTGGGCCATCAGAGAAGCAGCTGTATGACAAACAAGGGAAGGGT ATATTCCATCCTGTTTGTGGGGTCAAGACTCGGAAAGTTACTGCAGATGAAGCTGCTGCT ATAGTAATGGCAGCTACTCGAGGACTGGGTGCTGCAAATGACTCACTTAACACCATGAAA GGAACCAAGGACAATGTTCGCACCCATGTTAGTAATGATCCTTCTTCCAGCTTTGGAAGT TTCTCATCTTTACAGGACCGAAATGCACTGTCCAAACACATTTCAAATAGTGATGTTGAT GCTTCACTTACAAGTAGTGGACAGCCCCAAAGGGAAGGTTTTGGAATCATTGATGATGAT TGGATTGCAAACACTATTGCAAAAGCTGCTGCTGCAGCAGCTTCCAAAGAGGCAGGTTCT TTGGAAGCTACCATGACAAAGGAACAGAAGCTGAAAGCTGATAGGCTTCGCCGTGCGAAG ATGTTTGCTGCAATCATTAAGAGTGGAGACAACAAGATGAATGATTTAGCTGCAGCATCG AACCCAACTAGTGAAGCTGCCAAGGCCATTCCTGATATGAATGCCTCTGGACTTGATCTG CAATCTGTGGCTAAGGAACGTGAAGGTAGTAGCTCTGTTCTGTTTGACCATGAGGGGCCA AACTTGACAAAACATAGTAAAGACTCTGATGATGAACAGAACAGAGTGCGGAAGTATAGA AAGAAACACCAAGAATCCGACGAGGAAAAAGATGAATCTGAGGATAGCTATAAGCACTCA AGGAAGAAGCATCGCCCAGAGCATTCAAGAGACCAGAGCAAGGATGTTCACAAACATAAG AACAAGAGTCACTCCAAGGACAGGGAATCCAGACATCATAGACACCATTGTAGCTCTTCG GAAGATGAGCATGAGCATGAACGTTGGAGTTCCAAATCAAGGCATAGGCATAGAGATGAT CACCGCTACTCTGACGAGGAACACTCTGATGAGGAACACAGGAGGTCACACAAGCATCGG AGGGAGCATCACTCCAGTTCTAAAAGGAAGCACGAGGAAGACTGA

Peptide Sequence

PEP ID	Zm00001d011652_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:8:157562221:157567969:1 gene:Zm00001d011652 transcript:Zm00001d011652_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Sequence	MPDHHLHSYFRYLVDHPQLLKDGADAVGTNKGNTENEHASSGGALSLLGTTYDSGDENEG TLPRSSEGMNPENSMTLDVQGHVKSASIMPDKKEIGKNQNAPPAVKRKTILMKKNQILTG NSMVAVQHEKVNDAIIASSTSKSHTNSGLSEIKEMILEPPSFMKRTMEKIIEFILTNGKE FEKKLIEQDRTTGRFPFLLSSNPYHSYYLKFLQETEESNSHGRSPNNKDRRGSSDRRGRN SRERADRSSCERADRSSRERADRRCSMERKDINYSMESSASDRSSSGPSEKQLYDKQGKG IFHPVCGVKTRKVTADEAAAIVMAATRGLGAANDSLNTMKGTKDNVRTHVSNDPSSSFGS FSSLQDRNALSKHISNSDVDASLTSSGQPQREGFGIIDDDWIANTIAKAAAAAASKEAGS LEATMTKEQKLKADRLRRAKMFAAIIKSGDNKMNDLAAASNPTSEAAKAIPDMNASGLDL QSVAKEREGSSSVLFDHEGPNLTKHSKDSDDEQNRVRKYRKKHQESDEEKDESEDSYKHS RKKHRPEHSRDQSKDVHKHKNKSHSKDRESRHHRHHCSSSEDEHEHERWSSKSRHRHRDD HRYSDEEHSDEEHRRSHKHRREHHSSSKRKHEED

Transcript Sequence

Transcript ID	Zm00001d011652_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:157562221:157567969:1 gene:Zm00001d011652 gene_biotype:protein_coding transcript_biotype:protein_coding description:SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Sequence	GAGATCGTTGGGCGGCATGCCTTACTGTTCGACGACGACGCGACGGCGGAGCTCGTCAAC TCCGGCGTCTCCCTTGTCCCCTGGGCGGCCGTCGGCGCGGCAGACCTCCTCCTCGACCGC CACGACGTCCGCCACCTCCTTGACCGCGTGCCCCCTCGCCCGCACCGCGCCTACTCGATG GCCCTCCTCTCCGCGCCCTCCCCTGACGGCGTCTCTGAGACCGAGCTCGATCGCGAGCGC TACCTTGACCTCCCGGCTGGCGACGGCGAATACGAGGGTTCTGGGGATGCGGCTCCTTCA GGAAATGGGTCAGATACTGGACAGACTGATTATAATGTTGTTCCTTTCTCGTATGGATAT CCCGCTGGTTCAGATGAACCAAATTCTTCGAACTTGTGCTATCGCCCATCATTTTATGTG CCAGAAAGCTTGTTGAATAAGCTGGTTAGTGTAAGCTTTGAACTCTCACTTTTAACTATT TTCTCTCCAGATATGTTAGAAATTTATTTCTTCTACCCTGTTATTAATATTCTTCAGTTG ATCCAGCAATAACTGTTCAAGGTGCATATGTTCTTCTAAGGATTAAATGCCTGTTTCAGA TGGTTGGAGCAGAGATGAAGTTCCTACTAGTGATGCACATTGTTTCCTTGCAATGTATCT TGACGTAAGGAATATAGGCAGGTGGGATTAGAATGATTCAAGTGCTACCTATAACAAAAA TGATGGGATGGCTGTCTTACGATATACCAGTTTTCTTATATAGTAATTCATTCAGTTTGA CATAATTTGTGTTTGTGTGCTCTCTAGCCATTGCTGAGACATTTTTTTGCTCCCATGTTT TAAATTTACAGCCTCCTTCTGAGAAGGTGCATCAGATAATTGCAAGGACAGCCTTATTTG TCAGCGAGCATGGGGGACAATCAGAGATTGTATTGAGGGTGAAACAAGGAGATAATCCAA CATTTGGATTCTTGATGCCTGATCATCATCTCCACAGCTACTTCCGCTACCTTGTTGATC ATCCTCAACTGCTGAAGGATGGTGCTGATGCTGTTGGCACGAATAAAGGCAATACTGAGA ATGAGCATGCTTCATCTGGCGGGGCTTTATCATTGCTTGGGACCACATATGACTCAGGAG ACGAGAATGAAGGCACACTCCCGCGTAGTTCGGAAGGCATGAATCCTGAAAATAGCATGA CTCTTGATGTGCAGGGCCATGTAAAATCTGCATCAATTATGCCTGACAAAAAAGAAATAG GCAAAAATCAGAATGCTCCTCCTGCAGTTAAAAGAAAAACAATATTGATGAAGAAGAATC AGATTCTTACTGGCAACAGCATGGTTGCTGTTCAGCATGAAAAGGTTAATGACGCAATTA TAGCATCAAGTACTTCCAAATCACATACCAATTCAGGCTTATCAGAAATAAAAGAAATGA TCCTTGAACCACCATCTTTCATGAAACGCACAATGGAGAAAATAATTGAGTTCATTCTGA CAAATGGGAAGGAGTTCGAGAAAAAACTGATTGAGCAAGACAGAACAACTGGGAGGTTTC CATTTCTTCTGTCTTCTAATCCATACCACTCATATTATCTAAAGTTTCTCCAGGAAACTG AAGAGTCCAATTCACATGGTAGAAGTCCTAATAACAAGGACAGAAGAGGTTCTTCTGACC GGAGGGGCAGAAACTCTCGTGAGCGCGCCGACAGAAGCTCCTGTGAGCGCGCTGACAGAA GCTCTCGTGAACGCGCCGACAGAAGGTGCTCAATGGAGCGCAAAGACATCAATTATAGCA TGGAATCCAGTGCTTCTGATAGAAGCTCATCTGGGCCATCAGAGAAGCAGCTGTATGACA AACAAGGGAAGGGTATATTCCATCCTGTTTGTGGGGTCAAGACTCGGAAAGTTACTGCAG ATGAAGCTGCTGCTATAGTAATGGCAGCTACTCGAGGACTGGGTGCTGCAAATGACTCAC TTAACACCATGAAAGGAACCAAGGACAATGTTCGCACCCATGTTAGTAATGATCCTTCTT CCAGCTTTGGAAGTTTCTCATCTTTACAGGACCGAAATGCACTGTCCAAACACATTTCAA ATAGTGATGTTGATGCTTCACTTACAAGTAGTGGACAGCCCCAAAGGGAAGGTTTTGGAA TCATTGATGATGATTGGATTGCAAACACTATTGCAAAAGCTGCTGCTGCAGCAGCTTCCA AAGAGGCAGGTTCTTTGGAAGCTACCATGACAAAGGAACAGAAGCTGAAAGCTGATAGGC TTCGCCGTGCGAAGATGTTTGCTGCAATCATTAAGAGTGGAGACAACAAGATGAATGATT TAGCTGCAGCATCGAACCCAACTAGTGAAGCTGCCAAGGCCATTCCTGATATGAATGCCT CTGGACTTGATCTGCAATCTGTGGCTAAGGAACGTGAAGGTAGTAGCTCTGTTCTGTTTG ACCATGAGGGGCCAAACTTGACAAAACATAGTAAAGACTCTGATGATGAACAGAACAGAG TGCGGAAGTATAGAAAGAAACACCAAGAATCCGACGAGGAAAAAGATGAATCTGAGGATA GCTATAAGCACTCAAGGAAGAAGCATCGCCCAGAGCATTCAAGAGACCAGAGCAAGGATG TTCACAAACATAAGAACAAGAGTCACTCCAAGGACAGGGAATCCAGACATCATAGACACC ATTGTAGCTCTTCGGAAGATGAGCATGAGCATGAACGTTGGAGTTCCAAATCAAGGCATA GGCATAGAGATGATCACCGCTACTCTGACGAGGAACACTCTGATGAGGAACACAGGAGGT CACACAAGCATCGGAGGGAGCATCACTCCAGTTCTAAAAGGAAGCACGAGGAAGACTGAT ACCAGGTTCGCCGGAAGTGTCTGTCTAGATCAGGTGCCAAGTTTGAATCAGACAAGCTGT CTGATGACACTGCACAAATCAACTCAGGGAACAACTGAAGCGCCGAGTAAACTGAGAGCA AAAATCAGAGCAACATACTGTAATATTTTGTATCACAGCAGTAACATTATGTCCTTAGGC CTCTGTTTTGTAGCCAATTGCTCTTTCGATTTCTGTATTTGTTTCGAACGTTCTAACTAG GTGTCTGTCCATCTTATTTGAAATCAGTGACCTGCTCGCCAAGTTCTAACTACATGCTGG CGTTTCTGATGCATGCATAGCTTTATTATTTCAAGTGGTC