Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011605_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:155682044:155685357:1 gene:Zm00001d011605 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor TFIID subunit 11%2C mRNA

Sequence

ATGAAGGACCCGTTCGAGGCGGACGTCGAGGAGCAGGACTCGCCGCCGGAGTCGCCGGCG
CCGCCCGAGGATGAACCCGGCGCCGCGGGCCCTGCGGAGGACCCCGAGGACTACGACGGC
GGCCCGCCCCCGCGCCAGCCGTCTGCCCCGGCGTCTCACGCAGCCGGTGCCAAGGCCAAG
GCCCGTGTCCATAGGGAGCAGCAGGAGGATGACGACGAGGACGAGGACCAGATTGAGGTC
GACCTCGAGAAGCTTCCCAGCAGCACTGGCGACCCAGACAAGCTCGCTAAGATGAAGTTC
GTGCTTGAATATGCCTTTGCTATACTGTCCCAATTTACACAACAGCAGATGAACCGTTAT
GAGTCATTCCGAAGATCTGGATTTCAGAAATCTAACATGAAAAGGCTGTTGGCAAGCATC
ACTGGAAGTCAGAAGATTTCTATCCCTACTTCAATTGTGGTATCGGGAATCGCCAAAATA
TTTGTTGGTGAGCTAATTGAAACAGGCAAGTTCAGAATAGTCGTGTTGTTTACTTTGTTT
CTATGGAATCGAATCTGCTACAGCGTTGCTGAATTTTTGCCTTTTGTTTCTGTTTGGAAT
CAGAGGCCCATTTTCTTCTTTCCACCTCACTATGTTACAAGGAACCTGCTAGCAGAGCAG
ACTTTAGCAAGAGTGGTCATGAGCGAGAGGAAGGATTCAGGACCCATTAGGCCTTGCCAC
ATCAGGGAGGCATACAGAAGATTGAAGCTTGAAGGGAAGATCCCACGGCGATCTGTTCCT
AGGCTCTTCCGCTAG

Peptide Sequence

PEP ID

Zm00001d011605_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:155682044:155685357:1 gene:Zm00001d011605 transcript:Zm00001d011605_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor TFIID subunit 11%2C mRNA

Sequence

MKDPFEADVEEQDSPPESPAPPEDEPGAAGPAEDPEDYDGGPPPRQPSAPASHAAGAKAK
ARVHREQQEDDDEDEDQIEVDLEKLPSSTGDPDKLAKMKFVLEYAFAILSQFTQQQMNRY
ESFRRSGFQKSNMKRLLASITGSQKISIPTSIVVSGIAKIFVGELIETGKFRIVVLFTLF
LWNRICYSVAEFLPFVSVWNQRPIFFFPPHYVTRNLLAEQTLARVVMSERKDSGPIRPCH
IREAYRRLKLEGKIPRRSVPRLFR

Transcript Sequence

Transcript ID

Zm00001d011605_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:155682044:155685357:1 gene:Zm00001d011605 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor TFIID subunit 11%2C mRNA

Sequence

ATGAAGGACCCGTTCGAGGCGGACGTCGAGGAGCAGGACTCGCCGCCGGAGTCGCCGGCG
CCGCCCGAGGATGAACCCGGCGCCGCGGGCCCTGCGGAGGACCCCGAGGACTACGACGGC
GGCCCGCCCCCGCGCCAGCCGTCTGCCCCGGCGTCTCACGCAGCCGGTGCCAAGGCCAAG
GCCCGTGTCCATAGGGAGCAGCAGGAGGATGACGACGAGGACGAGGACCAGATTGAGGTC
GACCTCGAGAAGCTTCCCAGCAGCACTGGCGACCCAGACAAGCTCGCTAAGATGAAGTTC
GTGCTTGAATATGCCTTTGCTATACTGTCCCAATTTACACAACAGCAGATGAACCGTTAT
GAGTCATTCCGAAGATCTGGATTTCAGAAATCTAACATGAAAAGGCTGTTGGCAAGCATC
ACTGGAAGTCAGAAGATTTCTATCCCTACTTCAATTGTGGTATCGGGAATCGCCAAAATA
TTTGTTGGTGAGCTAATTGAAACAGGCAAGTTCAGAATAGTCGTGTTGTTTACTTTGTTT
CTATGGAATCGAATCTGCTACAGCGTTGCTGAATTTTTGCCTTTTGTTTCTGTTTGGAAT
CAGAGGCCCATTTTCTTCTTTCCACCTCACTATGTTACAAGGAACCTGCTAGCAGAGCAG
ACTTTAGCAAGAGTGGTCATGAGCGAGAGGAAGGATTCAGGACCCATTAGGCCTTGCCAC
ATCAGGGAGGCATACAGAAGATTGAAGCTTGAAGGGAAGATCCCACGGCGATCTGTTCCT
AGGCTCTTCCGCTAG