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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011603_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:155648431:155649588:1 gene:Zm00001d011603 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable purine permease 4
Sequence

ATGCTCTCCACTACCTCCCCGGTCCCACTCCTCGACACGCCGGCGCCCTCGACGGACGCC
GACGCCAAAAATGGCACGGCGAGTCGGCGGCGCGCGCGGCTGCTGCTGCTGTGCGCCAAC
TACGCTGCGCTCCTCGGTGGCTCCGTGGCGTCCAGCCTGCTGTCCCGGTACTACTTCGCG
CACGGCGGGTGCGACCGGTGGGTGGCCACGCTGGTGCAGTCGGTCGGGTTCCCAGTCCTG
CTGGTGCCCGTCTACGCCGGCCGGCCCGCCTCCCACTCCCAGTCCCAGTCCCAGCCCCGG
CCGTTCGCGTGGCTCACGCGGCGGCCGCTGCTGGTGGCCGCGTGCGTCGTCATCGGCGTG
CTCATGGGCGTGAACAACCTGCTCTTCTCCTACAGCTCCTCGTATCTGCCCGTGTCCACC
TCGTCGCTGCTGCTGTCCACGCAGCTGGCCTTCACGCTCGTGCTGGCCGCCGCCATCGTG
CGCCACCCGCTCACCTTCTCCAGCCTCAACGCCGTCGTGCTCCTCACGCTCAGCTCCGTG
CTGCTCGCGCTCCGGTCGTCGTCGGCCGAGCGCCCCGACGGCGGGAGCCGGGCCAGCTAC
CTCGCGGGCCTCGCCGTCACGCTCGGCGCCGCGGGGCTCTTCGCCGCCTACCTGCCGGTG
ATGGAGCTGGTGTACCGCAGGGCCGTGTCCGGCGGGTTCCGCATGGCGGTGGAGGTGCAG
GTGGTCATGCAGGCCGCCGCGACGGCCCTGGCGGTCGCCGGGCTGGCCGCGGCTGGCGGC
GGGTGGCGCGGGGAGCTGGCGCGCTGGGACCTCTCGCCGGCCGCGTACTGGGCGGTGGTG
GCCGCGCTGGTGGTCACGTGGCAGGCCTGCTTCATGGGCACCGCCGGGATGGTGTACCTG
ACGTCGTCGCTGCACAGCGGCGTGTGCATGACCGCCGTGCTCACCGCCAACGTGATCGGC
GGCGTGGCCGTGTTCCGCGACCCGTTCGGCTGGGAGAAGGCCGTGGCCACGGTGCTCTGC
GTCTGGGGCTTCTCCTCCTACCTGTACGGTGAGTACAGCACCACGCAGCAGGCGCAGGAA
GAAGGCGACCGCAAGGTGGCGGCCGCGTCCGACGGAGGTGGCGCGGGGCACAAGAGTGTT
GCTAGTGATGTGGTTTAG

Peptide Sequence

PEP ID

Zm00001d011603_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:155648431:155649588:1 gene:Zm00001d011603 transcript:Zm00001d011603_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable purine permease 4
Sequence

MLSTTSPVPLLDTPAPSTDADAKNGTASRRRARLLLLCANYAALLGGSVASSLLSRYYFA
HGGCDRWVATLVQSVGFPVLLVPVYAGRPASHSQSQSQPRPFAWLTRRPLLVAACVVIGV
LMGVNNLLFSYSSSYLPVSTSSLLLSTQLAFTLVLAAAIVRHPLTFSSLNAVVLLTLSSV
LLALRSSSAERPDGGSRASYLAGLAVTLGAAGLFAAYLPVMELVYRRAVSGGFRMAVEVQ
VVMQAAATALAVAGLAAAGGGWRGELARWDLSPAAYWAVVAALVVTWQACFMGTAGMVYL
TSSLHSGVCMTAVLTANVIGGVAVFRDPFGWEKAVATVLCVWGFSSYLYGEYSTTQQAQE
EGDRKVAAASDGGGAGHKSVASDVV

Transcript Sequence

Transcript ID

Zm00001d011603_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:155648431:155649588:1 gene:Zm00001d011603 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable purine permease 4
Sequence

ATGCTCTCCACTACCTCCCCGGTCCCACTCCTCGACACGCCGGCGCCCTCGACGGACGCC
GACGCCAAAAATGGCACGGCGAGTCGGCGGCGCGCGCGGCTGCTGCTGCTGTGCGCCAAC
TACGCTGCGCTCCTCGGTGGCTCCGTGGCGTCCAGCCTGCTGTCCCGGTACTACTTCGCG
CACGGCGGGTGCGACCGGTGGGTGGCCACGCTGGTGCAGTCGGTCGGGTTCCCAGTCCTG
CTGGTGCCCGTCTACGCCGGCCGGCCCGCCTCCCACTCCCAGTCCCAGTCCCAGCCCCGG
CCGTTCGCGTGGCTCACGCGGCGGCCGCTGCTGGTGGCCGCGTGCGTCGTCATCGGCGTG
CTCATGGGCGTGAACAACCTGCTCTTCTCCTACAGCTCCTCGTATCTGCCCGTGTCCACC
TCGTCGCTGCTGCTGTCCACGCAGCTGGCCTTCACGCTCGTGCTGGCCGCCGCCATCGTG
CGCCACCCGCTCACCTTCTCCAGCCTCAACGCCGTCGTGCTCCTCACGCTCAGCTCCGTG
CTGCTCGCGCTCCGGTCGTCGTCGGCCGAGCGCCCCGACGGCGGGAGCCGGGCCAGCTAC
CTCGCGGGCCTCGCCGTCACGCTCGGCGCCGCGGGGCTCTTCGCCGCCTACCTGCCGGTG
ATGGAGCTGGTGTACCGCAGGGCCGTGTCCGGCGGGTTCCGCATGGCGGTGGAGGTGCAG
GTGGTCATGCAGGCCGCCGCGACGGCCCTGGCGGTCGCCGGGCTGGCCGCGGCTGGCGGC
GGGTGGCGCGGGGAGCTGGCGCGCTGGGACCTCTCGCCGGCCGCGTACTGGGCGGTGGTG
GCCGCGCTGGTGGTCACGTGGCAGGCCTGCTTCATGGGCACCGCCGGGATGGTGTACCTG
ACGTCGTCGCTGCACAGCGGCGTGTGCATGACCGCCGTGCTCACCGCCAACGTGATCGGC
GGCGTGGCCGTGTTCCGCGACCCGTTCGGCTGGGAGAAGGCCGTGGCCACGGTGCTCTGC
GTCTGGGGCTTCTCCTCCTACCTGTACGGTGAGTACAGCACCACGCAGCAGGCGCAGGAA
GAAGGCGACCGCAAGGTGGCGGCCGCGTCCGACGGAGGTGGCGCGGGGCACAAGAGTGTT
GCTAGTGATGTGGTTTAG