Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011560_T059
CDS Infomation

cds chromosome:B73_RefGen_v4:8:154471908:154486025:1 gene:Zm00001d011560 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 113 description:Homeobox-DDT domain protein RLT1
Sequence

ATGAAGGAAAGAGGTTACACCAATCGCCGTAGATCCCGCCACCGTCTGACTCCTGGAACT
GTGAAATTTGCCGCTTTCCATGTGCTCTCGCTTGAAGGAAGTAATGGTCTCACAATATTG
GATGTAGCAGAAAAAATTCAGAAATCTGGATTGAGAGACCTCACAACAAGCAAGACACCT
GAGGCATCCATAGCTGCTGCTTTGTCTAGGGATGCAAAACTTTTTGAGAGAACTGCTCCT
TCAACATATTGTTTGAAGTCGCCTTATAGAAAAGATCCAGCTGATTCTGAGGCCGTGTTG
TCAGCAGCGCGTGAAAAAATTAGGGCCTTTCAGAATGTGCTTTCTGACTCTGAAGCTGAA
AAGGAGGCAGATGAAGCTGAGAGGGATGATGATTCTGACTGTGATGATGCTGATGATGAC
CCTGATGGTGATGATGTGAATATTGAGGTGGAAGAAGACAAGGATCCTCTTCTTGCCGTC
AAGGCACAAGACGAAGTACCGAGTACAACTACAGTTATTGGCATAAAGACCAAGTTAGAT
AGTGTAGGTAATGCATTGAACTCATCAAGTAGTTTTACTAAATCAGCAAAAGGTGCTCCT
CTCCCTTATTTAGGCAGGTCCAGTGCAGCAGATACTTCTAATGATTCACCTCTTGGAGGC
CCATCAGCTAATCATGAAGTAACCCCTGGCGATTCTGAAAATACTCAAATTGATGAAAGC
AATCAAATTGAGCCTTGGGTATGTGCACTAGCAGAAGGAGACTACTGCGATCTTAGTGTT
GAAGAACGCCTTAACGCACTGGTTGCTCTTGTTGGTGTTGCCACTGAAGGGAACTCTATT
CGTGGTGTACTTGAGGAACGTTTGGAATTAGCAAATGCCTTAAAGAAGCAAATGTGGGCA
GAAGTGCAACTTGACAAGAGGCGTTTCAAGGAAGAATTTGCTAGCAGAGTACAATATAAC
TCTGGCATGAGTTTTAAGCCTGATATATATCAAGAAAACAACATGACAGAGATTACTTCA
ACTCGAGCCTGTGATGCTTACAAAGAAAACGATGGACATGTTGGGACAATCAACAATTGT
GAGATGCTTGATCAGCATAGTCAGGGTAATGCTGGTGGTATAACTTATGATAGAAATGTC
GTAGGCCAGGAAATCCATGCAACCCCAGATACTTCGTATGTTCAGCAGTATGCTTATGCT
GATAAAACACGATCTCAGTTGAAATCGTACATTGGTCACCGGGCAGAGCAGCTCTATGTT
TACAGATCCCTGCCCCTAGGTCAGGATCGGAGGCGAAACAGGTATTGGCAGTTTACAACT
TCAGCATCACCAAATGACCCTGGCTCAGGAAGAATCTTTTTTGAATCGGAAGATGGATGT
TGGAGAGTTATCGACTCAGAGGATTCCTTTGATTCTTTAGTGGCTGCCCTTGATACACGT
GGCACCCGGGAAGCACAGCTGCGTTCAATGTTGCAAATGATCGAGACAACCTTTAAGGAA
GCTATTAAAAGGAGAAGTGCAAGTATAGAATTATCTGCTACAGTGTATCCAAAGAATGGA
GCTACTGACATGATAAGGGCAAATTATCATAGAGAGGTTGGAAGCTCAAGCAGTACTCCT
TTTAATGATACATCTGATAGTGTAACAGCATATTCTGATTCTTTTAAAGTAGAGCTTGGG
CGTAATGATTTTGAGAAGGCAGCTATATCAAAAAGGGCAGATATATTTTTAAAATGGATG
TGGAGGGAATGCTACAATCAGGAAGAGACATGTGCCATGAGATACGGCAAGAAAAGATGC
TCTGAATTGTTGCATTCTTGTAATTGCTGCTATCAGATTTACCTAGCCGAAGAAAGACAC
TGTTCTTCTTGCCATAAGACTTTCAAATCCATTTACAATTTTTCTGATCATACAACACAA
TGCGAAGAGAAATGGAGAACTGACCCTTACTGGAAGATGCAAATCGCTGATTATTCTGTT
CCAATAGGAATGGTATTACTCAAGCTTCAGTTAGTTTTGATTGAGGCATATATACCATCA
GAAGCACTTCAACCATTTTGGACTGATGTGTATCGGAAATCTTGGAGTGTGAAGCTTTAT
GCTACCAAATCTATTGCTGAGACATTCCAGCTTTTGACTGTTCTGGAAGGTGCAATAATA
CCAGATCGCCTCTCTTCTGATTTTGAAACAACAAGCGAATGTCTAAACTCACAGGCTGGA
TTTGCTTCTGTCCTTCCATGGGTTCCTGACACTACTTCTGCTGTTATGCTCCGAGTGTTA
GACCTTGACTCAGCTATTTTGTATGTGCAAAATCAAAAGATGGAGAGGGATGATGGAGGT
TTTATGAAATTTCCATCAAGGTATACAGTTGTTAAGAGCAAACAAGAAACAATTCCACTC
GAACCAACTGGTATGGATTTGTATGATGGAAGGTGGCTTCCTGGTAGTGGCCGTAGGGGA
CGTGGCCGTGGAAGTAGAGGAGGTAGCAGGGGAGGCAGGGGCCGAAGTCGAGGTGGAAGG
ATCCCAAGAGGTGTTAGCAGCTCATCAAGGATCGAGTTCAAGGATGGCATTGCTGCTTCT
GGTAGAGCGCCAAGGAAGAATGCACGTCGAGGTCGAGGTCGAGGTCGAGGTCGTGGGCGT
CGAACTGTCAGACCTCGGCAGCCATCTGTGGGCAGAGGCAGATCAATTCCAAAGGAAAAT
TTGATGGGAAGCTTTAGCATGCTTACCAGCTCAAAGGCTGCCGACATTGAGGAGTCTCCA
CGAAGCTCTGGCGCAGATGAGTGGGGCTTGGAGACCAGAATGACATACACTGAGCGTGAC
GAGAACAGTTCTGGATCACGCTATGAAGATAACGAGGAAAACGGCCAGCCCATGGACGAG
GATTATGAAGAGCAGGTTCCAGATTACTCAATAGACTATTCTAGTGGGTCGAGGCACCAT
GAAATGATGTCCATGATGGATCACGAGACTGACGAGGAAGATGAAGATGCTGAAGGTGAT
GAGAATGTGGAAGAAGATGATGCAGACCACGCAGTTGACGATGCCGATGTTGAGATGGAC
GAAGGTGATGATGAAATTGGTGATGACGGAGAGGATGGCGGCGTTGGCGGGGAGATGACT
CCGGATGAGGATCCAGATGCTACTTCATATTCATCTGACTACAGCGAATAA

Peptide Sequence

PEP ID

Zm00001d011560_P059
PEP Infomation

pep chromosome:B73_RefGen_v4:8:154471908:154486025:1 gene:Zm00001d011560 transcript:Zm00001d011560_T059 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 113 description:Homeobox-DDT domain protein RLT1
Sequence

MKERGYTNRRRSRHRLTPGTVKFAAFHVLSLEGSNGLTILDVAEKIQKSGLRDLTTSKTP
EASIAAALSRDAKLFERTAPSTYCLKSPYRKDPADSEAVLSAAREKIRAFQNVLSDSEAE
KEADEAERDDDSDCDDADDDPDGDDVNIEVEEDKDPLLAVKAQDEVPSTTTVIGIKTKLD
SVGNALNSSSSFTKSAKGAPLPYLGRSSAADTSNDSPLGGPSANHEVTPGDSENTQIDES
NQIEPWVCALAEGDYCDLSVEERLNALVALVGVATEGNSIRGVLEERLELANALKKQMWA
EVQLDKRRFKEEFASRVQYNSGMSFKPDIYQENNMTEITSTRACDAYKENDGHVGTINNC
EMLDQHSQGNAGGITYDRNVVGQEIHATPDTSYVQQYAYADKTRSQLKSYIGHRAEQLYV
YRSLPLGQDRRRNRYWQFTTSASPNDPGSGRIFFESEDGCWRVIDSEDSFDSLVAALDTR
GTREAQLRSMLQMIETTFKEAIKRRSASIELSATVYPKNGATDMIRANYHREVGSSSSTP
FNDTSDSVTAYSDSFKVELGRNDFEKAAISKRADIFLKWMWRECYNQEETCAMRYGKKRC
SELLHSCNCCYQIYLAEERHCSSCHKTFKSIYNFSDHTTQCEEKWRTDPYWKMQIADYSV
PIGMVLLKLQLVLIEAYIPSEALQPFWTDVYRKSWSVKLYATKSIAETFQLLTVLEGAII
PDRLSSDFETTSECLNSQAGFASVLPWVPDTTSAVMLRVLDLDSAILYVQNQKMERDDGG
FMKFPSRYTVVKSKQETIPLEPTGMDLYDGRWLPGSGRRGRGRGSRGGSRGGRGRSRGGR
IPRGVSSSSRIEFKDGIAASGRAPRKNARRGRGRGRGRGRRTVRPRQPSVGRGRSIPKEN
LMGSFSMLTSSKAADIEESPRSSGADEWGLETRMTYTERDENSSGSRYEDNEENGQPMDE
DYEEQVPDYSIDYSSGSRHHEMMSMMDHETDEEDEDAEGDENVEEDDADHAVDDADVEMD
EGDDEIGDDGEDGGVGGEMTPDEDPDATSYSSDYSE

Transcript Sequence

Transcript ID

Zm00001d011560_T059
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:154471908:154486025:1 gene:Zm00001d011560 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 113 description:Homeobox-DDT domain protein RLT1
Sequence

GGGTCATGATGGTGAGAATGTTATATTGGCACTTCGAAATGGTACAGCAGCAGTGAATGC
TGTTGCTAAGATGAAGGAAAGAGGTTACACCAATCGCCGTAGATCCCGCCACCGTCTGAC
TCCTGGAACTGTGAAATTTGCCGCTTTCCATGTGCTCTCGCTTGAAGGAAGTAATGGTCT
CACAATATTGGATGTAGCAGAAAAAATTCAGAAATCTGGATTGAGAGACCTCACAACAAG
CAAGACACCTGAGGCATCCATAGCTGCTGCTTTGTCTAGGGATGCAAAACTTTTTGAGAG
AACTGCTCCTTCAACATATTGTTTGAAGTCGCCTTATAGAAAAGATCCAGCTGATTCTGA
GGCCGTGTTGTCAGCAGCGCGTGAAAAAATTAGGGCCTTTCAGAATGTGCTTTCTGACTC
TGAAGCTGAAAAGGAGGCAGATGAAGCTGAGAGGGATGATGATTCTGACTGTGATGATGC
TGATGATGACCCTGATGGTGATGATGTGAATATTGAGGTGGAAGAAGACAAGGATCCTCT
TCTTGCCGTCAAGGCACAAGACGAAGTACCGAGTACAACTACAGTTATTGGCATAAAGAC
CAAGTTAGATAGTGTAGGTAATGCATTGAACTCATCAAGTAGTTTTACTAAATCAGCAAA
AGGTGCTCCTCTCCCTTATTTAGGCAGGTCCAGTGCAGCAGATACTTCTAATGATTCACC
TCTTGGAGGCCCATCAGCTAATCATGAAGTAACCCCTGGCGATTCTGAAAATACTCAAAT
TGATGAAAGCAATCAAATTGAGCCTTGGGTATGTGCACTAGCAGAAGGAGACTACTGCGA
TCTTAGTGTTGAAGAACGCCTTAACGCACTGGTTGCTCTTGTTGGTGTTGCCACTGAAGG
GAACTCTATTCGTGGTGTACTTGAGGAACGTTTGGAATTAGCAAATGCCTTAAAGAAGCA
AATGTGGGCAGAAGTGCAACTTGACAAGAGGCGTTTCAAGGAAGAATTTGCTAGCAGAGT
ACAATATAACTCTGGCATGAGTTTTAAGCCTGATATATATCAAGAAAACAACATGACAGA
GATTACTTCAACTCGAGCCTGTGATGCTTACAAAGAAAACGATGGACATGTTGGGACAAT
CAACAATTGTGAGATGCTTGATCAGCATAGTCAGGGTAATGCTGGTGGTATAACTTATGA
TAGAAATGTCGTAGGCCAGGAAATCCATGCAACCCCAGATACTTCGTATGTTCAGCAGTA
TGCTTATGCTGATAAAACACGATCTCAGTTGAAATCGTACATTGGTCACCGGGCAGAGCA
GCTCTATGTTTACAGATCCCTGCCCCTAGGTCAGGATCGGAGGCGAAACAGGTATTGGCA
GTTTACAACTTCAGCATCACCAAATGACCCTGGCTCAGGAAGAATCTTTTTTGAATCGGA
AGATGGATGTTGGAGAGTTATCGACTCAGAGGATTCCTTTGATTCTTTAGTGGCTGCCCT
TGATACACGTGGCACCCGGGAAGCACAGCTGCGTTCAATGTTGCAAATGATCGAGACAAC
CTTTAAGGAAGCTATTAAAAGGAGAAGTGCAAGTATAGAATTATCTGCTACAGTGTATCC
AAAGAATGGAGCTACTGACATGATAAGGGCAAATTATCATAGAGAGGTTGGAAGCTCAAG
CAGTACTCCTTTTAATGATACATCTGATAGTGTAACAGCATATTCTGATTCTTTTAAAGT
AGAGCTTGGGCGTAATGATTTTGAGAAGGCAGCTATATCAAAAAGGGCAGATATATTTTT
AAAATGGATGTGGAGGGAATGCTACAATCAGGAAGAGACATGTGCCATGAGATACGGCAA
GAAAAGATGCTCTGAATTGTTGCATTCTTGTAATTGCTGCTATCAGATTTACCTAGCCGA
AGAAAGACACTGTTCTTCTTGCCATAAGACTTTCAAATCCATTTACAATTTTTCTGATCA
TACAACACAATGCGAAGAGAAATGGAGAACTGACCCTTACTGGAAGATGCAAATCGCTGA
TTATTCTGTTCCAATAGGAATGGTATTACTCAAGCTTCAGTTAGTTTTGATTGAGGCATA
TATACCATCAGAAGCACTTCAACCATTTTGGACTGATGTGTATCGGAAATCTTGGAGTGT
GAAGCTTTATGCTACCAAATCTATTGCTGAGACATTCCAGCTTTTGACTGTTCTGGAAGG
TGCAATAATACCAGATCGCCTCTCTTCTGATTTTGAAACAACAAGCGAATGTCTAAACTC
ACAGGCTGGATTTGCTTCTGTCCTTCCATGGGTTCCTGACACTACTTCTGCTGTTATGCT
CCGAGTGTTAGACCTTGACTCAGCTATTTTGTATGTGCAAAATCAAAAGATGGAGAGGGA
TGATGGAGGTTTTATGAAATTTCCATCAAGGTATACAGTTGTTAAGAGCAAACAAGAAAC
AATTCCACTCGAACCAACTGGTATGGATTTGTATGATGGAAGGTGGCTTCCTGGTAGTGG
CCGTAGGGGACGTGGCCGTGGAAGTAGAGGAGGTAGCAGGGGAGGCAGGGGCCGAAGTCG
AGGTGGAAGGATCCCAAGAGGTGTTAGCAGCTCATCAAGGATCGAGTTCAAGGATGGCAT
TGCTGCTTCTGGTAGAGCGCCAAGGAAGAATGCACGTCGAGGTCGAGGTCGAGGTCGAGG
TCGTGGGCGTCGAACTGTCAGACCTCGGCAGCCATCTGTGGGCAGAGGCAGATCAATTCC
AAAGGAAAATTTGATGGGAAGCTTTAGCATGCTTACCAGCTCAAAGGCTGCCGACATTGA
GGAGTCTCCACGAAGCTCTGGCGCAGATGAGTGGGGCTTGGAGACCAGAATGACATACAC
TGAGCGTGACGAGAACAGTTCTGGATCACGCTATGAAGATAACGAGGAAAACGGCCAGCC
CATGGACGAGGATTATGAAGAGCAGGTTCCAGATTACTCAATAGACTATTCTAGTGGGTC
GAGGCACCATGAAATGATGTCCATGATGGATCACGAGACTGACGAGGAAGATGAAGATGC
TGAAGGTGATGAGAATGTGGAAGAAGATGATGCAGACCACGCAGTTGACGATGCCGATGT
TGAGATGGACGAAGGTGATGATGAAATTGGTGATGACGGAGAGGATGGCGGCGTTGGCGG
GGAGATGACTCCGGATGAGGATCCAGATGCTACTTCATATTCATCTGACTACAGCGAATA
AGAAAGCAGAAATAAGTGACCTTATCCTAGAGATCCTCCCTCAGCGT