Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011490_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:8:152112758:152120843:1 gene:Zm00001d011490 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:arabidopsis trithorax homolog5 description:Histone-lysine N-methyltransferase ATX3
Sequence	ATGAATTCAACTCTCCCCGGGAAGAACACAAAAATTTCTGATGTGAGAAAAGATAGTTCT GCACAGAAAGGAAGCAAGCCTGACAAAGTTGCACTGGTCTGTTTTGACATGGAAGGAACA TACGAACCAGATCTCGAATTAATTTCTTGCCATTGTGGCCCTTGCAAGGGACAGAAATTT TTGTTCAATGAATGGGAGCGGCATGCTGGCTGTAGAAGTAAAAATTGGAGATCCAGTATT AAGCTTAAGGGCTCGTTGATGCCATTTGGGAAATGGATAGATCGACATCAGCCAGGCGTG TGCCCTACTAATCCTCCAAAACGCTCATCTCAGAAAATGAAGAAACAGAAGTTAATTGAT TTACTGAATGACCCATATGATCCTGTAAATGTAAAATGGACGACAGAAAGATGTGCAGTC TGTAGATGGGTTGAAGATTGGGATTACAACAAAATTGTGATTTGTAATAGATGTCAGATA GCAGTTCATCAGGAATGTTATGGTGTGAGGGGTAAGCAAGACTTTACTTCATGGGTTTGT CGGGCTTGTGAAAAACCTGAGCAAAAGAGGGAGTGCTGTCTTTGCCCTGTAAAAGGTGGT GCTTTGAAGCCAACAAATGTTGATAACTTGTGGGTTCACGTGACATGTGCATGGTTTCAG TCACAGGTTGCTTTTGCTAGTGATGAGCTCATGGAACCTGCTATTGGGATATTGAACATT CAACCTTTGTTATTTATGAAGATGTGTGTGATTTGTAAGCAAATACATGGTTCATGTACT CAATGCTACAGGTGCTCTACTTACTACCATGCCATTTGTGCATCAAGGGCAGGCTATCGA ATGGAGCTTCACTGCTTGGAAAAAAATGGCAGACAGACAACAAAGAAGATTTCTTACTGT GCCCAACATCGGAGCCCTAACCCTGATAATGTTTTGATAATTCAAACTCCTGCTGGGACT TTCTCATCAAAAAAGCTTGTTCATAGCAATGGCAAGGTAGCTGCATCGAGGCTGATCAGG AAAGATATTCCCTTGGATTTGCCATCAGAAGTTAAAATTTCAGAGAACTTATCAGCGGCG AGATGTCGGGTTTATGTTAGGAAAGATCTAAAGAGATCTAGAGAGGGAACAATTGTACAT CATGTTAGAGGACCTTGTCAACACCGCTGGGAAGAAATTGATAATCTGAATCCACCAAGG GAAGAGAGGGATCCAGAATCTTTTTGTACTTTCAAGGAGCGTTTGTGTTACTTACAGAAA ACAGAGCATGGTAGAGTATGTTTTGGTAGATCAGGAATTCATAGGTGGGGACTTTTTGCT CGGAGGGACATTCAAGAAGGAGAAATGGTCCTTGAGTATCGTGGTGAGCAGGTCAGACGA AGTGTAGCTGATTTACGTGAAGAAAAATATCGTGTGCAGGGCAAAGATTGCTATCTTTTC AAAATCAGCGAGGAAGTGGTTGTTGATGCCACAGACAAAGGAAACGTGGCACGACTGATC AATCATTCTTGCACACCAAACTGCTATGCAAGGATTATGAGTGTTGGACATGATGAAAGT CGTATTGTTCTAATAGCGAAGAAAAAAGTTTGCGCTGGTGATGAGCTAACGTATGACTAC CTGTTCGATCCAGACGAGGCCGATGAACGCAAAGTGCCATGCCTTTGTCAGACTGCTAAC TGCCGGAAATTCATGAATTAG

Peptide Sequence

PEP ID	Zm00001d011490_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:8:152112758:152120843:1 gene:Zm00001d011490 transcript:Zm00001d011490_T008 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:arabidopsis trithorax homolog5 description:Histone-lysine N-methyltransferase ATX3
Sequence	MNSTLPGKNTKISDVRKDSSAQKGSKPDKVALVCFDMEGTYEPDLELISCHCGPCKGQKF LFNEWERHAGCRSKNWRSSIKLKGSLMPFGKWIDRHQPGVCPTNPPKRSSQKMKKQKLID LLNDPYDPVNVKWTTERCAVCRWVEDWDYNKIVICNRCQIAVHQECYGVRGKQDFTSWVC RACEKPEQKRECCLCPVKGGALKPTNVDNLWVHVTCAWFQSQVAFASDELMEPAIGILNI QPLLFMKMCVICKQIHGSCTQCYRCSTYYHAICASRAGYRMELHCLEKNGRQTTKKISYC AQHRSPNPDNVLIIQTPAGTFSSKKLVHSNGKVAASRLIRKDIPLDLPSEVKISENLSAA RCRVYVRKDLKRSREGTIVHHVRGPCQHRWEEIDNLNPPREERDPESFCTFKERLCYLQK TEHGRVCFGRSGIHRWGLFARRDIQEGEMVLEYRGEQVRRSVADLREEKYRVQGKDCYLF KISEEVVVDATDKGNVARLINHSCTPNCYARIMSVGHDESRIVLIAKKKVCAGDELTYDY LFDPDEADERKVPCLCQTANCRKFMN

Transcript Sequence

Transcript ID	Zm00001d011490_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:152112758:152120843:1 gene:Zm00001d011490 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:arabidopsis trithorax homolog5 description:Histone-lysine N-methyltransferase ATX3
Sequence	ATGATGAACCATACAGCAATCACCACAGGAAGGAAGTAAAGCTTAGGCATTACTATGAGG AAGACGAGGAGGAGGAAGAGGAGAAAGAAGATATTTTTCACTGTACCGAAGAATTGGTGT ATGGGGACATTGTGTGGGCAAAGCTTGGCAAACGCCAGCCAATGTGGCCAGGAGTGGTGG TCGACCCAACTCAGCAGGCCGCTGCCGATGCAATGCCACCACAACCTCGCGGTGTCGCTG TGCTTTGTGTGATGCTATTTGGCTGGCGCACAGAGTTCAGTGGCGAGAAGAAGTACGTGT GGGTGAGGCAGGGGTTGATATTTCCATTTTCAGACTACATGAACCGATTTCAAGGGCAGA CAGAACTAAGCAGTTGCAAACCTGCTGATTTCCGGAGGGCAGTAGAAGAGGCCTTTTTGG CTGATCAGGGATTCTCAGAAGTAGTGGTACATTGCAGCACCAAGGGCCAATCTGTGGTGT GTCATTCTTTCCCAGATGATTTACATGAAGTGACTGGTTCAAATGAATTGGAGTACCAGC CACAGATTAAGCAGTGCAGAAGAGTGCTGCAGTGTGAGAGTTGTGGAAACTGCTTTCCCA ACAAGGATACAAACAAGATGGTGTATGTGATGGAGCAACTTGCTTGCAGACTTTGTGCCA GGATCTTAGCATTAAAAAAGTACTGTGGGATTTGTTTAAAAAATTTGCAACATAAATATG GCGGAAGAAGGGTAATACAGTTTGCTGTCATGGCTGTGAAAGTTGGGTTCATGCAGAATG CGATGAAAACTGCAGCAACCTCAAGGATCTACAAGACAAGAAATATCACTGTCCTTACTG TAGAGTTAAAATGAATTCAACTCTCCCCGGGAAGAACACAAAAATTTCTGATGTGAGAAA AGATAGTTCTGCACAGAAAGGAAGCAAGCCTGACAAAGTTGCACTGGTCTGTTTTGACAT GGAAGGAACATACGAACCAGATCTCGAATTAATTTCTTGCCATTGTGGCCCTTGCAAGGG ACAGAAATTTTTGTTCAATGAATGGGAGCGGCATGCTGGCTGTAGAAGTAAAAATTGGAG ATCCAGTATTAAGCTTAAGGGCTCGTTGATGCCATTTGGGAAATGGATAGATCGACATCA GCCAGGCGTGTGCCCTACTAATCCTCCAAAACGCTCATCTCAGAAAATGAAGAAACAGAA GTTAATTGATTTACTGAATGACCCATATGATCCTGTAAATGTAAAATGGACGACAGAAAG ATGTGCAGTCTGTAGATGGGTTGAAGATTGGGATTACAACAAAATTGTGATTTGTAATAG ATGTCAGATAGCAGTTCATCAGGAATGTTATGGTGTGAGGGGTAAGCAAGACTTTACTTC ATGGGTTTGTCGGGCTTGTGAAAAACCTGAGCAAAAGAGGGAGTGCTGTCTTTGCCCTGT AAAAGGTGGTGCTTTGAAGCCAACAAATGTTGATAACTTGTGGGTTCACGTGACATGTGC ATGGTTTCAGTCACAGGTTGCTTTTGCTAGTGATGAGCTCATGGAACCTGCTATTGGGAT ATTGAACATTCAACCTTTGTTATTTATGAAGATGTGTGTGATTTGTAAGCAAATACATGG TTCATGTACTCAATGCTACAGGTGCTCTACTTACTACCATGCCATTTGTGCATCAAGGGC AGGCTATCGAATGGAGCTTCACTGCTTGGAAAAAAATGGCAGACAGACAACAAAGAAGAT TTCTTACTGTGCCCAACATCGGAGCCCTAACCCTGATAATGTTTTGATAATTCAAACTCC TGCTGGGACTTTCTCATCAAAAAAGCTTGTTCATAGCAATGGCAAGGTAGCTGCATCGAG GCTGATCAGGAAAGATATTCCCTTGGATTTGCCATCAGAAGTTAAAATTTCAGAGAACTT ATCAGCGGCGAGATGTCGGGTTTATGTTAGGAAAGATCTAAAGAGATCTAGAGAGGGAAC AATTGTACATCATGTTAGAGGACCTTGTCAACACCGCTGGGAAGAAATTGATAATCTGAA TCCACCAAGGGAAGAGAGGGATCCAGAATCTTTTTGTACTTTCAAGGAGCGTTTGTGTTA CTTACAGAAAACAGAGCATGGTAGAGTATGTTTTGGTAGATCAGGAATTCATAGGTGGGG ACTTTTTGCTCGGAGGGACATTCAAGAAGGAGAAATGGTCCTTGAGTATCGTGGTGAGCA GGTCAGACGAAGTGTAGCTGATTTACGTGAAGAAAAATATCGTGTGCAGGGCAAAGATTG CTATCTTTTCAAAATCAGCGAGGAAGTGGTTGTTGATGCCACAGACAAAGGAAACGTGGC ACGACTGATCAATCATTCTTGCACACCAAACTGCTATGCAAGGATTATGAGTGTTGGACA TGATGAAAGTCGTATTGTTCTAATAGCGAAGAAAAAAGTTTGCGCTGGTGATGAGCTAAC GTATGACTACCTGTTCGATCCAGACGAGGCCGATGAACGCAAAGTGCCATGCCTTTGTCA GACTGCTAACTGCCGGAAATTCATGAATTAGTTCGCTTAGATGTCAGAGGATCACTGATA TAATTTCCCCCCCTTCTTATTTACCCCCGGGTTTTCTCCCTCTCGATGATTCATTTCCTG GTATATGTTAGAGCTCAATTTTTGCTTACATTCGTTTTTAGAATAAGTATAGTTAGAGCT CTCAAAATGTGGAGCTTCCATTCCTGTAAATACCACAGCTGTAATCACTAGGGACAGTTC ATTTTTCAAATAAAACATTTTTTGTG