Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011473_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:8:151508012:151513496:-1 gene:Zm00001d011473 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:potassium channel5 description:Potassium channel AKT1
Sequence

ATGGCAGGGTGCGCACCCTCCAGGGTGGCGTCGTGCGGGCCGTGGGGCGGCAGAGCGGCG
CTAGAGAGTGAGCTGTCGTGGGACGGCAGCCACTACAGCATCTCCAGCGGCATCCTGCCG
TCGCTCGGCGCGCGGAGCAACCGCCGCGTCAAGCTCAGGCCCTTCATCGTGTCGCCCTAC
GACCGCCGATACAGATGCTGGGAGACTTTTCTCATAATCCTTGTGGTATACTCTGCATGG
GTTTCCCCATTTGAGTTTGGCTTCATTCAGAAACCAACGGGCGCCCTAGCTGCAGTGGAC
AATGTCGTGAATGCGTTCTTCGCAGTGGACATCATCCTGACCTTCTTTGTAGCTTACTTG
GATAGAATGACATACTTGCTTGAAGATGATCCAAAAAGAATAGCTTGGAGGTATACTACC
AGTTGGTTTGTTCTTGACGTGGCCTCCACCATCCCGAGTGAATTTGCTCGGAAGATACTA
CCACCAGACCTCAGGTCATATGGATTTTTCAACATGCTTCGTCTATGGCGTCTCCGTAGA
GTCAGCTCTCTCTTTGCTAGATTGGAGAAAGATAGACATTTCAATTACTTCTGGGTTCGA
TGCGCAAAGCTCATATGTGTCACACTTTTTGCGGTCCACTGTTCGGCATGCTTCTACTAT
CTTCTCGCTGATATGTATCCTACCCCAACAGATACGTGGATTGGTAATTCAATGCCAGAT
TTTCATCAGCGGGGTTTGTGGATTCGCTATGTAGTGTCAGTATATTGGTCAATCACTACG
CTTACCACTGTGGGTTATGGTGATTTGCACGCGGAGAACACAAGGGAAATGATATTCAAC
ATTTTCTACATGTTATTCAACCTTGGATTGACTGCCTATTTGATTGGTAACATGACCAAT
CTGGTTGTCCATGGCACCAGCCGTACTCGAAAATATAGAGATACAATTCAGGCAGCGACC
AGCTTTGCACTAAGGAATCAATTACCAAGTCGGCTCCAAGATCAGATGATCTCACATCTT
TGCTTGAAGTTCAGGACAGATTCAGAAGGTCTTCAACAACAAGAAACGCTCGATGTCCTC
CCTAAGGCTATAAGATCCAGCATTTCTCAGTATCTATTTTTCAATCTTGTCCAAAAGGTT
TACTTGTTTGAAGGGGTGTCCAATGACCTCATTTTTCAACTGGTTTCTGAGATGAAAGCT
GAATATTTTCCACCTAGGGAAGACGTGATTTTGCAGAATGAAGCACCCACAGACTTTTAT
ATTTTAGTTACTGGTAGCGCGGAGTTGATAGAGTTGCAAAATGGCGGAGAACAGATGGTT
GGAGTGGCTAAGGCAGGAGATGTTGTTGGAGAAATTGGGGTTCTTTGCTATAGGCCTCAA
CTATTCACAGTTCGAACAAAATCATTATGCCAACTTCTGCGTATGAATCGCACTGCCTTT
CTCAGCCTTGTTCAATCCAATGTTGCAGATGGAACAATAATAATGAACAACCTTATTCGG
TTATTAAAGCAGCAGAATGACAACAGTGTAATGATGGGTGTTCTGAAGGAGATCGAGAAC
ATGCTAGCTCGGGGTCGTCTGGATTTGCCAGTTACTCTCTGTTTTGCAGTAAACAAAGGA
GATGATTTTATGCTACACCAACTTTTGAAGCGTGGTTTGGATCCAAATGAATCGGATAAC
AATGGGCATACAGCACTGCATATAGCTGCTTCCAAAGGAGACGAACAATGTGTCAAGCTT
CTTCTAGAGCACGGAGCTGATCCAAATGCTAGAGACTCCGAAGGAAAGGTGCCTCTTTGG
GAGGCTTTATGTGAAAAGCAGAATCCAGTGGTAGAGCTGCTAGTACAGAGCGGTGCGGGG
CTATCATCCGGAGACGTGGCCTTGTACGCTTGCGTCGCTGTAGAGGAAAATGACCCTGAG
CTGCTTGAGAACATTATCCGTTACGGCGGCAACGTAAACAGCTCAATGAAAGACGGAACC
ACGCCGCTGCACCGCGCGGTCTGTGACGGGAACGTCCAGATGGTTGAGTTGTTGCTGGAA
CACGGAGCTGACATCGACAAGCAGGACAACAATGGCTGGTCGGCGAGAGCTCTAGCTGAC
CAGCAAGGCCATGACGACATCCAGTCTCTCTTTCGATCGCGGAAAGCACATAGGCAGCAG
CATGCCTCGAAGGGCAGAGTGGCACCTGTGCCGATATGGAGGTTCAACAGCGAACCCACG
ATGCCAAAGATGAAACATGAAGAAGACGCTGAGCTACGCGGCAAAGTTGTTCCGCAGAAG
CTCCTCAGAAAGAGGGTCAGCTTCCAGAATTCTCTTTTCGGTGTCATCTCTTCGTCCCAC
GCCCGCCAGGACACTGGTCGTCTGCTCTCGAAAGGCCTTGCTGGAACAGGTAGTCCAGGT
TGCAGCCACGGCTCCCTCGTCAGGGTGACAATCGGCTGTCCTGAGAAGGGGAACGCTGCA
GGGAAGCTCGTGCTCTTACCACGGTCGATGACTGAGCTTCTCGAACTAGGCGCGAGGAAG
TTTGGCTTCAAGCCTACCAAGGTCCTGACGACTGGGGGTGCTGAGATTGATGAGGTGGAG
CTTATCAGAGACGGTGATCATGTTGTTCTCGTCAGTGATGACTGGGCGCCAGATGTTGCA
CAATTAAGACCGAACGACAAGTGA

Peptide Sequence

PEP ID

Zm00001d011473_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:8:151508012:151513496:-1 gene:Zm00001d011473 transcript:Zm00001d011473_T012 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:potassium channel5 description:Potassium channel AKT1
Sequence

MAGCAPSRVASCGPWGGRAALESELSWDGSHYSISSGILPSLGARSNRRVKLRPFIVSPY
DRRYRCWETFLIILVVYSAWVSPFEFGFIQKPTGALAAVDNVVNAFFAVDIILTFFVAYL
DRMTYLLEDDPKRIAWRYTTSWFVLDVASTIPSEFARKILPPDLRSYGFFNMLRLWRLRR
VSSLFARLEKDRHFNYFWVRCAKLICVTLFAVHCSACFYYLLADMYPTPTDTWIGNSMPD
FHQRGLWIRYVVSVYWSITTLTTVGYGDLHAENTREMIFNIFYMLFNLGLTAYLIGNMTN
LVVHGTSRTRKYRDTIQAATSFALRNQLPSRLQDQMISHLCLKFRTDSEGLQQQETLDVL
PKAIRSSISQYLFFNLVQKVYLFEGVSNDLIFQLVSEMKAEYFPPREDVILQNEAPTDFY
ILVTGSAELIELQNGGEQMVGVAKAGDVVGEIGVLCYRPQLFTVRTKSLCQLLRMNRTAF
LSLVQSNVADGTIIMNNLIRLLKQQNDNSVMMGVLKEIENMLARGRLDLPVTLCFAVNKG
DDFMLHQLLKRGLDPNESDNNGHTALHIAASKGDEQCVKLLLEHGADPNARDSEGKVPLW
EALCEKQNPVVELLVQSGAGLSSGDVALYACVAVEENDPELLENIIRYGGNVNSSMKDGT
TPLHRAVCDGNVQMVELLLEHGADIDKQDNNGWSARALADQQGHDDIQSLFRSRKAHRQQ
HASKGRVAPVPIWRFNSEPTMPKMKHEEDAELRGKVVPQKLLRKRVSFQNSLFGVISSSH
ARQDTGRLLSKGLAGTGSPGCSHGSLVRVTIGCPEKGNAAGKLVLLPRSMTELLELGARK
FGFKPTKVLTTGGAEIDEVELIRDGDHVVLVSDDWAPDVAQLRPNDK

Transcript Sequence

Transcript ID

Zm00001d011473_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:151508012:151513496:-1 gene:Zm00001d011473 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:potassium channel5 description:Potassium channel AKT1
Sequence

GGGCTGCCAGATTCGGGGCGCGCGGCGCTCCTACCCACCCATCCCTCTCCCGGTAAACCC
CGGGGAGGTTTACCGCGTAGCCGCTGGGCGGCGGCAAGGCGGTGGGGGAGCAATGGCAGG
GTGCGCACCCTCCAGGGTGGCGTCGTGCGGGCCGTGGGGCGGCAGAGCGGCGCTAGAGAG
TGAGCTGTCGTGGGACGGCAGCCACTACAGCATCTCCAGCGGCATCCTGCCGTCGCTCGG
CGCGCGGAGCAACCGCCGCGTCAAGCTCAGGCCCTTCATCGTGTCGCCCTACGACCGCCG
ATACAGATGCTGGGAGACTTTTCTCATAATCCTTGTGGTATACTCTGCATGGGTTTCCCC
ATTTGAGTTTGGCTTCATTCAGAAACCAACGGGCGCCCTAGCTGCAGTGGACAATGTCGT
GAATGCGTTCTTCGCAGTGGACATCATCCTGACCTTCTTTGTAGCTTACTTGGATAGAAT
GACATACTTGCTTGAAGATGATCCAAAAAGAATAGCTTGGAGGTATACTACCAGTTGGTT
TGTTCTTGACGTGGCCTCCACCATCCCGAGTGAATTTGCTCGGAAGATACTACCACCAGA
CCTCAGGTCATATGGATTTTTCAACATGCTTCGTCTATGGCGTCTCCGTAGAGTCAGCTC
TCTCTTTGCTAGATTGGAGAAAGATAGACATTTCAATTACTTCTGGGTTCGATGCGCAAA
GCTCATATGTGTCACACTTTTTGCGGTCCACTGTTCGGCATGCTTCTACTATCTTCTCGC
TGATATGTATCCTACCCCAACAGATACGTGGATTGGTAATTCAATGCCAGATTTTCATCA
GCGGGGTTTGTGGATTCGCTATGTAGTGTCAGTATATTGGTCAATCACTACGCTTACCAC
TGTGGGTTATGGTGATTTGCACGCGGAGAACACAAGGGAAATGATATTCAACATTTTCTA
CATGTTATTCAACCTTGGATTGACTGCCTATTTGATTGGTAACATGACCAATCTGGTTGT
CCATGGCACCAGCCGTACTCGAAAATATAGAGATACAATTCAGGCAGCGACCAGCTTTGC
ACTAAGGAATCAATTACCAAGTCGGCTCCAAGATCAGATGATCTCACATCTTTGCTTGAA
GTTCAGGACAGATTCAGAAGGTCTTCAACAACAAGAAACGCTCGATGTCCTCCCTAAGGC
TATAAGATCCAGCATTTCTCAGTATCTATTTTTCAATCTTGTCCAAAAGGTTTACTTGTT
TGAAGGGGTGTCCAATGACCTCATTTTTCAACTGGTTTCTGAGATGAAAGCTGAATATTT
TCCACCTAGGGAAGACGTGATTTTGCAGAATGAAGCACCCACAGACTTTTATATTTTAGT
TACTGGTAGCGCGGAGTTGATAGAGTTGCAAAATGGCGGAGAACAGATGGTTGGAGTGGC
TAAGGCAGGAGATGTTGTTGGAGAAATTGGGGTTCTTTGCTATAGGCCTCAACTATTCAC
AGTTCGAACAAAATCATTATGCCAACTTCTGCGTATGAATCGCACTGCCTTTCTCAGCCT
TGTTCAATCCAATGTTGCAGATGGAACAATAATAATGAACAACCTTATTCGGTTATTAAA
GCAGCAGAATGACAACAGTGTAATGATGGGTGTTCTGAAGGAGATCGAGAACATGCTAGC
TCGGGGTCGTCTGGATTTGCCAGTTACTCTCTGTTTTGCAGTAAACAAAGGAGATGATTT
TATGCTACACCAACTTTTGAAGCGTGGTTTGGATCCAAATGAATCGGATAACAATGGGCA
TACAGCACTGCATATAGCTGCTTCCAAAGGAGACGAACAATGTGTCAAGCTTCTTCTAGA
GCACGGAGCTGATCCAAATGCTAGAGACTCCGAAGGAAAGGTGCCTCTTTGGGAGGCTTT
ATGTGAAAAGCAGAATCCAGTGGTAGAGCTGCTAGTACAGAGCGGTGCGGGGCTATCATC
CGGAGACGTGGCCTTGTACGCTTGCGTCGCTGTAGAGGAAAATGACCCTGAGCTGCTTGA
GAACATTATCCGTTACGGCGGCAACGTAAACAGCTCAATGAAAGACGGAACCACGCCGCT
GCACCGCGCGGTCTGTGACGGGAACGTCCAGATGGTTGAGTTGTTGCTGGAACACGGAGC
TGACATCGACAAGCAGGACAACAATGGCTGGTCGGCGAGAGCTCTAGCTGACCAGCAAGG
CCATGACGACATCCAGTCTCTCTTTCGATCGCGGAAAGCACATAGGCAGCAGCATGCCTC
GAAGGGCAGAGTGGCACCTGTGCCGATATGGAGGTTCAACAGCGAACCCACGATGCCAAA
GATGAAACATGAAGAAGACGCTGAGCTACGCGGCAAAGTTGTTCCGCAGAAGCTCCTCAG
AAAGAGGGTCAGCTTCCAGAATTCTCTTTTCGGTGTCATCTCTTCGTCCCACGCCCGCCA
GGACACTGGTCGTCTGCTCTCGAAAGGCCTTGCTGGAACAGGTAGTCCAGGTTGCAGCCA
CGGCTCCCTCGTCAGGGTGACAATCGGCTGTCCTGAGAAGGGGAACGCTGCAGGGAAGCT
CGTGCTCTTACCACGGTCGATGACTGAGCTTCTCGAACTAGGCGCGAGGAAGTTTGGCTT
CAAGCCTACCAAGGTCCTGACGACTGGGGGTGCTGAGATTGATGAGGTGGAGCTTATCAG
AGACGGTGATCATGTTGTTCTCGTCAGTGATGACTGGGCGCCAGATGTTGCACAATTAAG
ACCGAACGACAAGTGAGCCAGCCGTAGTGCTCTTATTGCAATTTCACGCAACATGGGGAA
AATATGCCCCTTTGTGACCCAAGCTGGGTTAGTACATGCCCGCCATGTAAATTGAAGTCT
AGCCGTGATAGTTTTGAAGCTGTAGGATGTATCCAGCTTGGAAATGAATTTGTAGTGAGC
TGGTCCAGTAGACTGTAGTTTCGCCTTCTCTTTCCAAGAGAATGGGTCCACAAAATGTAA
TTACATGATTTCTTTTTTTCTGTATTTGATATCAAGCTTT