Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011444_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:8:150552452:150556595:1 gene:Zm00001d011444 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	ATGAAGCTTAGAGCAAAAGGGATCGGCCTCCTGCTTCTCCTTGTCTTGCTTGCTCTTTGC TCCACCATTGAAGTCGGCGAGGCAAGAAGAGGCAAGCATTGGAGGTCGTCGAGGAGCTCA CCGGGCTCATCCCAGCTCAAGAAAGGCAAGGGAAAGAAGAGCAGCTCCCACCGGCAGTAC GGCGCCAACCGGCCAGGTCCGAAGCCACCGGTCAGCTCGACACCAAGCTCTGGCGCTGGC AAGGGAAATCATCAGAATCCGTACCAACCAAGCCCAAGTCCAAGCCCGAATGCCCCTGAC ATCCCTCCTATGCCAAGCCCTGCCAATGGCAGCAGGCATTCCACTCCCGAGCCGCCGGCT CCAAGCTGTGGGAAGGGTCAGCAGCAGCCATCACAGCCGCCGCCAGCGACCTCGCAGGGT GCAGTATTCAATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAG GCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTTCTCGTACCA CCAGAACTAGAGTTCCTAGTTGGGCCAATCTCGTTCTCTGGGCCTTACTGCAAATCGAAT ATTGTCTTTCAGCTGGAAGGAACAATCCTAGCTCCAACCAGTGCTAAATCCTGGGGTTCA GGCTTGCTCCAGTGGCTCGAGTTCACCAAACTAAATGGAATGGTTATTCAAGGGAACGGC ATTATAAATGGCAGAGGGCAACAATGGTGGACCTACTCAGACACAGAAGACGAGGATGAT GATGACACGTACGATGTGGAGTTTGAAAGAATGCCACAGATTAAACCTACAGCATTGAGG TTTTATGGTAGTTTCAACGTTGTAGTGGCTGGTATCACTATTGTCAACAGCTCACAGTGT CATCTTAAGTTTGACAACTGTCAAGGAGTGATGGTCCATGACTTGACTATATCCTCCCCT GAGAACAGTCTCAACACTGACGGAATACACCTGCAGAACTCCAAAGATGTCAGCATTCAT CATACAAACCTGGCTTGTGGTGACGATTGCATCTCCATCCAGACAGGATGCAGCAACATA AATATACATAACGTGAATTGTGGACCAGGCCATGGAATCAGCATAGGTGGACTAGGCCGA GACAACACAAAAGCATGCGTATCAAATGTTACAGTAAGAGATGTCAACATGTTCAGAACC ATGAATGGTGTCAGAATCAAGACCTGGCAGGGTGGTGTAGGATTGGTTCAAGACATAAGG TTCTCAAATATACAAGTCTCAGAGGTTCAAACACCCATCATCATAGATCAGTTTTATTGT GACAGAAGCACTTGCAGAAATCAAACATCAGCAGTGGCAGTATCAGGGGTTCAATATGAG AATATCAGAGGAACATTTACAATCAAACCTGTCCATTTTGCATGCAGTGACAGCTTACCT TGTTCAGGAATCTCTCTTACCGGTGTGCAACTCAGACCAGTGCAAGTACCCCACTACCAC CTGAATAACCCATTCTGCTGGCAAGCTTTTGGGGAGCTCTACACTCCAACTGTCCCTCCT ATAGCTTGCTTGCAGATTGGAAAACCTGCTGGCAATAACTTACAGTCATATGATGACATA TGCTGA

Peptide Sequence

PEP ID	Zm00001d011444_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:8:150552452:150556595:1 gene:Zm00001d011444 transcript:Zm00001d011444_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	MKLRAKGIGLLLLLVLLALCSTIEVGEARRGKHWRSSRSSPGSSQLKKGKGKKSSSHRQY GANRPGPKPPVSSTPSSGAGKGNHQNPYQPSPSPSPNAPDIPPMPSPANGSRHSTPEPPA PSCGKGQQQPSQPPPATSQGAVFNVVDFGAKGDGVTDDTKAFEGAWAAACKKGACTVLVP PELEFLVGPISFSGPYCKSNIVFQLEGTILAPTSAKSWGSGLLQWLEFTKLNGMVIQGNG IINGRGQQWWTYSDTEDEDDDDTYDVEFERMPQIKPTALRFYGSFNVVVAGITIVNSSQC HLKFDNCQGVMVHDLTISSPENSLNTDGIHLQNSKDVSIHHTNLACGDDCISIQTGCSNI NIHNVNCGPGHGISIGGLGRDNTKACVSNVTVRDVNMFRTMNGVRIKTWQGGVGLVQDIR FSNIQVSEVQTPIIIDQFYCDRSTCRNQTSAVAVSGVQYENIRGTFTIKPVHFACSDSLP CSGISLTGVQLRPVQVPHYHLNNPFCWQAFGELYTPTVPPIACLQIGKPAGNNLQSYDDI C

Transcript Sequence

Transcript ID	Zm00001d011444_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:150552452:150556595:1 gene:Zm00001d011444 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	AATCACAGGCCTCCCGGCCTCCCGTGCGCTATTCTCTATCAGCTTACCCAGCACACAGTA CACACTCTAATCTCCACACGACCCAATAGATATACGGGGCTGAAGGATGAAGCTTAGAGC AAAAGGGATCGGCCTCCTGCTTCTCCTTGTCTTGCTTGCTCTTTGCTCCACCATTGAAGT CGGCGAGGCAAGAAGAGGCAAGCATTGGAGGTCGTCGAGGAGCTCACCGGGCTCATCCCA GCTCAAGAAAGGCAAGGGAAAGAAGAGCAGCTCCCACCGGCAGTACGGCGCCAACCGGCC AGGTCCGAAGCCACCGGTCAGCTCGACACCAAGCTCTGGCGCTGGCAAGGGAAATCATCA GAATCCGTACCAACCAAGCCCAAGTCCAAGCCCGAATGCCCCTGACATCCCTCCTATGCC AAGCCCTGCCAATGGCAGCAGGCATTCCACTCCCGAGCCGCCGGCTCCAAGCTGTGGGAA GGGTCAGCAGCAGCCATCACAGCCGCCGCCAGCGACCTCGCAGGGTGCAGTATTCAATGT GGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAGGCTTTTGAAGGAGC GTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTTCTCGTACCACCAGAACTAGAGTT CCTAGTTGGGCCAATCTCGTTCTCTGGGCCTTACTGCAAATCGAATATTGTCTTTCAGCT GGAAGGAACAATCCTAGCTCCAACCAGTGCTAAATCCTGGGGTTCAGGCTTGCTCCAGTG GCTCGAGTTCACCAAACTAAATGGAATGGTTATTCAAGGGAACGGCATTATAAATGGCAG AGGGCAACAATGGTGGACCTACTCAGACACAGAAGACGAGGATGATGATGACACGTACGA TGTGGAGTTTGAAAGAATGCCACAGATTAAACCTACAGCATTGAGGTTTTATGGTAGTTT CAACGTTGTAGTGGCTGGTATCACTATTGTCAACAGCTCACAGTGTCATCTTAAGTTTGA CAACTGTCAAGGAGTGATGGTCCATGACTTGACTATATCCTCCCCTGAGAACAGTCTCAA CACTGACGGAATACACCTGCAGAACTCCAAAGATGTCAGCATTCATCATACAAACCTGGC TTGTGGTGACGATTGCATCTCCATCCAGACAGGATGCAGCAACATAAATATACATAACGT GAATTGTGGACCAGGCCATGGAATCAGCATAGGTGGACTAGGCCGAGACAACACAAAAGC ATGCGTATCAAATGTTACAGTAAGAGATGTCAACATGTTCAGAACCATGAATGGTGTCAG AATCAAGACCTGGCAGGGTGGTGTAGGATTGGTTCAAGACATAAGGTTCTCAAATATACA AGTCTCAGAGGTTCAAACACCCATCATCATAGATCAGTTTTATTGTGACAGAAGCACTTG CAGAAATCAAACATCAGCAGTGGCAGTATCAGGGGTTCAATATGAGAATATCAGAGGAAC ATTTACAATCAAACCTGTCCATTTTGCATGCAGTGACAGCTTACCTTGTTCAGGAATCTC TCTTACCGGTGTGCAACTCAGACCAGTGCAAGTACCCCACTACCACCTGAATAACCCATT CTGCTGGCAAGCTTTTGGGGAGCTCTACACTCCAACTGTCCCTCCTATAGCTTGCTTGCA GATTGGAAAACCTGCTGGCAATAACTTACAGTCATATGATGACATATGCTGAAACACTCA AAGTGCCTTTGTTTGTTGATTGGTGCTTATCCATGAGTGGTCGTTGTGATAGATGCGACC CCATTTGCACCATTGCTTGCTGATGAGCACATATACAGTTATTTTGAGGTCATCTTATTA CAACATTGTAGCTTTTTTCATCAAAGTAAACATAAATATATTCATTTGAAATGG