Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011419_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:149989042:149991297:1 gene:Zm00001d011419 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative cytochrome P450 superfamily protein

Sequence

ATGGTAGTCCTCGAAGTGTCGTTTGCCGCTGCAGCCTCATCAGTAGTGCGATGGATCCTC
ATGCTCGGGGGCCTGATGGCGGCGGCGGCGCTCCTGTGGCAGGCCGGGCGTCTGCTGCGC
CTGCTGTGGTGGCAGCCCCGGCGGCTGGAGCGGGCGCTGCGCGCGCAGGGCGTCCGCGGC
ACGTCGTACCGCTTCCCCGCCGGCGACCTCAAGGAGTACGGCCGGCTGGCGAAGGAGGCC
TGGTCGAAGCCCCTGCCGCTGCGGTGCCACGACACCGCGCCGCGAGTCGCGCCGTTCCTG
CACCGGCTGGTCCTGGAGCACGGGAGGACGAGCATGTCCTGGTTCGGCCCCAGCCCCAAG
GTGACCATCGTCGACCCGGAGCTGGCCAAGGACGTGCTGTCCAACAAGTTCGGCCACTTC
GAGAAGCTCAAGGTCCCGGCGCTGTCCAAGATGCTGGGCTCCGGCGTGGCCAGCCACGAG
GGCGAGAAGTGGGTCAAGCACCGGAGGATCCTCAACCCTGCGTTCCATCTTGAGAAGCTC
AAGCGCATGCTGCCGGCGTTTTCTGCGTGCTGCGAGGAGCTGGTGAACAGGTGGGCGGCG
GAGTCCCTTGGCTCCGACGGCTCGTGCGAGCTGGACGTCTGGCCGGAGCTGCAGAACCTG
ACGGGAGACGTCATTTCTCGCACCGCTTTCAGCAGCAGCTACCGCGAAGGGAGAAGGATC
TTCCAGCTACAGGCCGAGCAAGCTTCGCTTGTCATGACCAACATTCGGAAGATCATGATG
ATCCCCGGTTACATGTACTTGCCTACCGCGAACAACAGGAAGATGCGCAGGAACAACAGG
GAGGTGGAGTCAATCCTGCGAGAGATAATCGGGAAGAGAATCCAGGCGATGGAACGAGGC
GAGGGCACCAAAGACGACATGCTGGGTCTACTGCTGGAGACAAACATGAGAGACGACATG
GGGATGACGATCGAAGACGTGATCGAGGAGTGCAAGGTGTTCTACTTCGCGGGGATGGAG
ACCACGTCGGTGCTGCTCACGTGGACGATGGTGGTGCTCAGCATGCACCCGGAGTGGCAG
GACCGCGCGAGGGAGGAGGTGACGGCTCTGTTCGGCAGGGACGACAAGCCCGAGTACGAC
GGCCTAAGCCGCCTCAAAGTCGTGACCATGGTGCTCTACGAGGTGCTCCGGCTGTACCCG
CCGGCCACGTCCGTTGTCCGGCAAACGTACAAGGAGATGGAGGTCGGAGGCGTCACCTAC
CCCGCCGGCGTGATCCTGGAGCTGCCCGTGCTGCTCATCCACCACGACCCGGACATCTGG
GGAGGCGACGCGCGCGAGTTCAGGCCCGACAGGTTCTCCGACGGCGTGTCCAGGGCCTCC
AAGGACCCCGGCGCGTTCCTCCCATTCGGCTGGGGCCCGCGCATCTGCATCGGCCAGAAC
TTCGCGCTGCTAGAGGCCAAGATGGCGCTCTGCATGATCCTCCAGCGCTTCGAGTTTAGG
CTCGCGCCGTCGTACACTCATGCGCCGCATACTGTGATAACCTTGCATCCTATGCACGGT
GCACAGCTTAAGCTCAGAGCAATATGA

Peptide Sequence

PEP ID

Zm00001d011419_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:149989042:149991297:1 gene:Zm00001d011419 transcript:Zm00001d011419_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative cytochrome P450 superfamily protein

Sequence

MVVLEVSFAAAASSVVRWILMLGGLMAAAALLWQAGRLLRLLWWQPRRLERALRAQGVRG
TSYRFPAGDLKEYGRLAKEAWSKPLPLRCHDTAPRVAPFLHRLVLEHGRTSMSWFGPSPK
VTIVDPELAKDVLSNKFGHFEKLKVPALSKMLGSGVASHEGEKWVKHRRILNPAFHLEKL
KRMLPAFSACCEELVNRWAAESLGSDGSCELDVWPELQNLTGDVISRTAFSSSYREGRRI
FQLQAEQASLVMTNIRKIMMIPGYMYLPTANNRKMRRNNREVESILREIIGKRIQAMERG
EGTKDDMLGLLLETNMRDDMGMTIEDVIEECKVFYFAGMETTSVLLTWTMVVLSMHPEWQ
DRAREEVTALFGRDDKPEYDGLSRLKVVTMVLYEVLRLYPPATSVVRQTYKEMEVGGVTY
PAGVILELPVLLIHHDPDIWGGDAREFRPDRFSDGVSRASKDPGAFLPFGWGPRICIGQN
FALLEAKMALCMILQRFEFRLAPSYTHAPHTVITLHPMHGAQLKLRAI

Transcript Sequence

Transcript ID

Zm00001d011419_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:149989042:149991297:1 gene:Zm00001d011419 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative cytochrome P450 superfamily protein

Sequence

ATCTCAAGTCAACTCCACTCGCACCAGCAGACAATTGCCGTCAAAGCAATGGTAGTCCTC
GAAGTGTCGTTTGCCGCTGCAGCCTCATCAGTAGTGCGATGGATCCTCATGCTCGGGGGC
CTGATGGCGGCGGCGGCGCTCCTGTGGCAGGCCGGGCGTCTGCTGCGCCTGCTGTGGTGG
CAGCCCCGGCGGCTGGAGCGGGCGCTGCGCGCGCAGGGCGTCCGCGGCACGTCGTACCGC
TTCCCCGCCGGCGACCTCAAGGAGTACGGCCGGCTGGCGAAGGAGGCCTGGTCGAAGCCC
CTGCCGCTGCGGTGCCACGACACCGCGCCGCGAGTCGCGCCGTTCCTGCACCGGCTGGTC
CTGGAGCACGGGAGGACGAGCATGTCCTGGTTCGGCCCCAGCCCCAAGGTGACCATCGTC
GACCCGGAGCTGGCCAAGGACGTGCTGTCCAACAAGTTCGGCCACTTCGAGAAGCTCAAG
GTCCCGGCGCTGTCCAAGATGCTGGGCTCCGGCGTGGCCAGCCACGAGGGCGAGAAGTGG
GTCAAGCACCGGAGGATCCTCAACCCTGCGTTCCATCTTGAGAAGCTCAAGCGCATGCTG
CCGGCGTTTTCTGCGTGCTGCGAGGAGCTGGTGAACAGGTGGGCGGCGGAGTCCCTTGGC
TCCGACGGCTCGTGCGAGCTGGACGTCTGGCCGGAGCTGCAGAACCTGACGGGAGACGTC
ATTTCTCGCACCGCTTTCAGCAGCAGCTACCGCGAAGGGAGAAGGATCTTCCAGCTACAG
GCCGAGCAAGCTTCGCTTGTCATGACCAACATTCGGAAGATCATGATGATCCCCGGTTAC
ATGTACTTGCCTACCGCGAACAACAGGAAGATGCGCAGGAACAACAGGGAGGTGGAGTCA
ATCCTGCGAGAGATAATCGGGAAGAGAATCCAGGCGATGGAACGAGGCGAGGGCACCAAA
GACGACATGCTGGGTCTACTGCTGGAGACAAACATGAGAGACGACATGGGGATGACGATC
GAAGACGTGATCGAGGAGTGCAAGGTGTTCTACTTCGCGGGGATGGAGACCACGTCGGTG
CTGCTCACGTGGACGATGGTGGTGCTCAGCATGCACCCGGAGTGGCAGGACCGCGCGAGG
GAGGAGGTGACGGCTCTGTTCGGCAGGGACGACAAGCCCGAGTACGACGGCCTAAGCCGC
CTCAAAGTCGTGACCATGGTGCTCTACGAGGTGCTCCGGCTGTACCCGCCGGCCACGTCC
GTTGTCCGGCAAACGTACAAGGAGATGGAGGTCGGAGGCGTCACCTACCCCGCCGGCGTG
ATCCTGGAGCTGCCCGTGCTGCTCATCCACCACGACCCGGACATCTGGGGAGGCGACGCG
CGCGAGTTCAGGCCCGACAGGTTCTCCGACGGCGTGTCCAGGGCCTCCAAGGACCCCGGC
GCGTTCCTCCCATTCGGCTGGGGCCCGCGCATCTGCATCGGCCAGAACTTCGCGCTGCTA
GAGGCCAAGATGGCGCTCTGCATGATCCTCCAGCGCTTCGAGTTTAGGCTCGCGCCGTCG
TACACTCATGCGCCGCATACTGTGATAACCTTGCATCCTATGCACGGTGCACAGCTTAAG
CTCAGAGCAATATGATCTCGACATGATGTCCCATCGTGTCGATGCCAGTGTTACGTACAT
GTATATGTATAACCTTACAATTCAGATAGGCATTCGGCCTTGTTAATGCCTGAAATAAAT
ATCTTCGTGTTGGCATTTTGTGATGTGCTTTTCACGTACCATTGGTGCTTTATTGCCTTT
TATAAACATGTGCATATATGTAACTCATACATTACAC