Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011401_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:8:149523759:149538666:1 gene:Zm00001d011401 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SGT1 homolog A
Sequence

ATGCTAACAAAGCAATTGGTCTTGATCCTACAATGCATAAAGCCTACTACCGGAAAGGGC
GATTCAAGGTTTACCCGTCTATTGAAGGAATGTGATGAGTGCATTGCTGAGGAATCTAGC
CAGGCACCAGCAAAGAATGTCGAGGCTCCTGTAGCTGCTACTGTTGAGGACAAGGAGGAT
GTCGCAAATATGGATAATACACCGCCAGTGGTAGAACCCCCAAGCAAACCTAAATATAGG
CATGACTACTACAACAGTGCCACAGAAGTGGTCCTCACAATATATGCTAAGGGTGTTCCT
GCTGATAGTGTAGTCATTGATTTTGGTGATCAGATGTTGAGTGTATCCATTGAAGTACCT
GGTGAAGAACCGTACCATTTTCAGCCCCGTCTGTTTTCTAAGATTATCCCTGAGAAATGC
AAGTATCAAGTTTTATCCACCAAGGTCGAAATACGCCTTGCAAAAGCTGAGCAGGTGACA
TGGACAACCCTGGATTATAGTGGAAGACCAAAGGCTATTCCCCAGAAGATAAGCACGCCA
GCTGAAACAGCCCCAAGACCTTCATACCCATCTTCAAAGTCAAAAAAGGACTGGGATAAA
CTGGAAGCTGAAGTAAAAAAGGAGGAGAAGGAAGAAAAACTTGAAGGTGATGCTGCATTG
AACAAGTTCTTCCGTGATATCTACAAGGATGCTGATGAAGATATGCGGAGGGCCATGGAC
AAGTCATTCAGGGAATCTAATGGTACCGTTCTCTCAACCAATTGGAAAGATGTTGGATCA
AAGACGGTGGAAGCGAGCCCTCCTGATGGTATGGAGCTCAAGAAGTGGGAAATTTGA

Peptide Sequence

PEP ID

Zm00001d011401_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:8:149523759:149538666:1 gene:Zm00001d011401 transcript:Zm00001d011401_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SGT1 homolog A
Sequence

MLTKQLVLILQCIKPTTGKGDSRFTRLLKECDECIAEESSQAPAKNVEAPVAATVEDKED
VANMDNTPPVVEPPSKPKYRHDYYNSATEVVLTIYAKGVPADSVVIDFGDQMLSVSIEVP
GEEPYHFQPRLFSKIIPEKCKYQVLSTKVEIRLAKAEQVTWTTLDYSGRPKAIPQKISTP
AETAPRPSYPSSKSKKDWDKLEAEVKKEEKEEKLEGDAALNKFFRDIYKDADEDMRRAMD
KSFRESNGTVLSTNWKDVGSKTVEASPPDGMELKKWEI

Transcript Sequence

Transcript ID

Zm00001d011401_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:149523759:149538666:1 gene:Zm00001d011401 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SGT1 homolog A
Sequence

GCAGACGCCCAGAGCCGGAGGGAGCGCCATGGCCGCGTCGGATCTGGAGAGCAAAGCCAA
GGAGGCCTTCGTCGACGACGACTTCGAGCTGGCCGCCGAACTCTACACGCAGGCCATCGA
CGCCGGGCCCGCCACTGCCGATCTCTACGCCGACCGCGCCCAGGCGCACATCAAGCTCGG
CAACTACACTGAGGCTGTGGCAGATGCTAACAAAGCAATTGGTCTTGATCCTACAATGCA
TAAAGCCTACTACCGGAAAGGGCGATTCAAGGTTTACCCGTCTATTGAAGGAATGTGATG
AGTGCATTGCTGAGGAATCTAGCCAGGCACCAGCAAAGAATGTCGAGGCTCCTGTAGCTG
CTACTGTTGAGGACAAGGAGGATGTCGCAAATATGGATAATACACCGCCAGTGGTAGAAC
CCCCAAGCAAACCTAAATATAGGCATGACTACTACAACAGTGCCACAGAAGTGGTCCTCA
CAATATATGCTAAGGGTGTTCCTGCTGATAGTGTAGTCATTGATTTTGGTGATCAGATGT
TGAGTGTATCCATTGAAGTACCTGGTGAAGAACCGTACCATTTTCAGCCCCGTCTGTTTT
CTAAGATTATCCCTGAGAAATGCAAGTATCAAGTTTTATCCACCAAGGTCGAAATACGCC
TTGCAAAAGCTGAGCAGGTGACATGGACAACCCTGGATTATAGTGGAAGACCAAAGGCTA
TTCCCCAGAAGATAAGCACGCCAGCTGAAACAGCCCCAAGACCTTCATACCCATCTTCAA
AGTCAAAAAAGGACTGGGATAAACTGGAAGCTGAAGTAAAAAAGGAGGAGAAGGAAGAAA
AACTTGAAGGTGATGCTGCATTGAACAAGTTCTTCCGTGATATCTACAAGGATGCTGATG
AAGATATGCGGAGGGCCATGGACAAGTCATTCAGGGAATCTAATGGTACCGTTCTCTCAA
CCAATTGGAAAGATGTTGGATCAAAGACGGTGGAAGCGAGCCCTCCTGATGGTATGGAGC
TCAAGAAGTGGGAAATTTGAAGTTTGGACTGCCCCTCTTGTAAATCCAGGTCTTGGAAGT
TATGACCTAGTTCTGTCCACCCATTTGGTGTCGTAAGTTTGGTTAAGTGTGTGTGTGTTT
TTGGTTCAGCTGTCGTTCGAGGAAAAGCTATTGTAAGTTGTGGACTGTGTAAAAGCTGCA
ATAGATTGTGGGTTGTGAAAAAGGTGTATGCTGTT